Alosa sapidissima (American shad): 121680607
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Entry
121680607 CDS
T11137
Symbol
aff1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121680607 (aff1)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
121680607 (aff1)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121680607
NCBI-ProteinID:
XP_041915983
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Position
13:9809456..9849943
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AA seq
1249 aa
AA seq
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MLGLIVVFVRLTYLKFGAILHLETSQQCVDHLGRFHNSHVIILHMEERNLLRQREWERRN
QEAQQQQEQYQENAPLFGEPYKTDKGDELSSRIQRMLGNYEDMKDLHKNFGSMPKDLSAS
VPFGRPGRPIHLDVPKPPFQNAPLPYGGNQVVPATQLSKKSPAPDHTLLSSAYSHPSLSL
DKGSPEPMDRKSEPWPEMASLPPALSPPSDPLSPLHSSDPSDTEQHDMDGKDSPGPRQPL
QASSSGPSSLVDTSQAEAQMEGAPLACETAPLPSQTFPLPLSSKPSLVMPQKPWAYVRPM
DGQDQVSSESPELKPSPDFDRQPYESLPDLKSISKPGLTQLKLPPPALEALSSDAQCVEE
ILREMTHTWPPLLTAIHTPSTADPPKFNFPNKESQHGHSGYSVQKHEAWRGSSSPPPPPP
ALSCQPEPPVAPARSSEGETASSSESESSSGSESDSESSESGGEELEEAPPPHIASPPPP
AKADGPAVNEWQLGRWLELKDPQPSLSVETQGDALHCSPSSPASSPKPREETSTPQHYNS
HSSPARPESASPAHYSYNSHISPVQPETTTPTHYNYNSHSSPVRTEPSTPPHYNYNSETT
TPAHYNFSSHTSPSRPEVKDPESKPSGPSQHVRSQSPSPPSDVDSGARKTVANKKPSSSS
KAPRPEDASRHVVSKELTSHQKDPSLADRPKVKTKAVPAKAPTKVGSKADKKAAKRTDKK
KAKEAAPKVTVKLSLPKEAEPDSLAHAPPPPLPLPSVKSRSSGGGRSDGLPKSSSKKKKQ
RDRSPAQVNRPDDDAPGKTAPEAPRTLLVKIQLSLLTRVPSAPKAARPPATGGSAEPGQK
RAERGDAAADAAPAKASRKRSAEKEDKSQPRKKLKLDKELKISSSPIAPSCPGSSKAEAP
KTAVEEKERKKKKKKKEKAPSSSTLAPAAQEPAKGAGHKRPLADVSESKATGDGEVKHKK
SSSKRSEHTKTGKKSPKSSFAVPEPAQPKRTPASNRVLLKLDDRQYSVEHHMKEAKKLKH
KADAMSEKVGKSFIYLEAALSFVESGIAMEMDPQTPKSAYTMFSETVVLIRFILKLRSYS
DPASPASEKDFAILCMRFQSLLQMAMFRYKREAALRYSRTLTDHFKSCKTSPSPRVSKAT
STPSQMSPMASPASSSSSSHSSATAPANTVALPQAIHQVASTYVSITALFLSAHSVWEQA
EEMAPKGSGVLGELDSAIGPLTLLSTMSAVVRYTRQGLHWLRQDSQQTH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcctaattgtagtattcgttcgattaacttacctgaaatttggagccattttg
catttggaaacaagccaacaatgtgtggaccaccttggaaggttccacaacagccacgtt
ataattttgcacatggaggagaggaacctgctgcggcagcgtgagtgggagcgcaggaac
caggaggcccagcagcagcaggagcagtaccaagagaacgcacccctcttcggggagccc
tataagacggacaaaggagatgagctctccagtcgcatccaacgaatgctgggcaattat
gaagacatgaaagacttgcacaagaactttggcagcatgcccaaagacctctctgcctcg
gtacccttcggcaggcctggtcggcccatccacttggacgtccccaagcccccattccag
aacgccccactcccctacggaggcaaccaagttgtcccagccacccagctgtcgaagaag
tctcccgctccggatcacaccttgctgtcttccgcctactcgcacccctctctcagtctc
gataaggggagtccagagcccatggatagaaagagtgaaccgtggcctgaaatggccagc
ctccccccagccctctctcccccgtccgaccctctgtcccccttacattccagcgacccc
agtgacaccgagcagcacgatatggacggtaaggacagccccgggcctcggcagcccctg
caggcctcctcctctgggccctctagtttggtggacacgtcccaagcggaggcccagatg
gagggcgcccccttggcctgcgagacggcccctctaccctcccagaccttccccctgccc
ctttcctccaagcccagcctcgtcatgccccagaagccctgggcctacgtccggcccatg
gacggccaggaccaggtctccagcgagtcccccgaactcaaaccctcaccggactttgat
cggcagccttacgagagcttaccggacctgaagagcatctctaagcctggcctcacccaa
ctgaagttacccccaccagccctcgaggcgctgtccagtgatgcccagtgcgtggaggag
atcttgagggaaatgacccacacctggcctccactcctcacagccatccacacgcccagc
actgccgaccctcccaagttcaacttccccaacaaggagtcccagcatggacactctgga
tactcggtccaaaagcatgaggcctggcgtggctcctcttctcctcctccgccaccacct
gcgctgtcctgtcagcctgagcccccagtggcgccagcgcgctccagtgagggggagact
gcaagctccagcgaatcagagagcagctctggctccgagtccgatagtgagagcagcgag
agtggaggggaggagctggaggaagccccacctcctcatatagccagcccccctcctcca
gccaaggctgatggccctgcggtgaatgagtggcagctgggtcgctggctggagctgaag
gatccgcagcccagcctgagcgtggagacgcaaggggatgcgttgcactgttctccttcc
agtcctgcctccagccccaaaccgcgggaggagaccagcacgccccagcactacaactcc
catagttcacctgcgcggccagagtctgccagcccagcacactacagctacaactcgcac
atctcccccgtgcagccagagaccacaacaccaacgcactataattacaactcccacagt
tcacctgtgcggactgagcctagcacaccgccccactacaactacaattcagagactacc
acaccagctcattacaacttcagttctcatacgtccccctcacggccagaggtcaaagac
cctgagtcaaagccatctggtccaagccagcacgttaggtcccagtctccctccccaccc
agtgatgtggacagtggggccaggaagacggtggccaacaagaagccgagttcaagcagc
aaagccccccggcccgaagacgcctcgcgtcacgtggtcagcaaggagttgacctcccat
caaaaagatccctccctcgccgaccggcccaaagtgaagacgaaagcagtcccagccaag
gccccgaccaaagtcggctcgaaagccgacaagaaggctgccaagcgcaccgacaagaag
aaggcgaaagaggctgcccctaaggtcactgtgaagctgtccctgcccaaggaggcagag
ccggactctctagcccatgcgccccctccccctctccccttaccgtcggtcaagagccgg
agcagcggaggcggccgaagtgacggcctgccgaagtcctcatcgaagaagaagaaacag
cgggaccgctcccccgcacaggtcaacaggccggacgacgacgcgcctggcaagaccgcg
ccggaggcgccgcgcaccctgctggtcaagatccagctcagcctactcaccagggtgccc
tccgcgcctaaggctgcccggccccccgccacggggggctccgctgagccgggacagaag
agggccgagaggggagacgctgccgcagacgctgcaccagccaaagccagcagaaagaga
tccgcggagaaagaggacaagtctcagcccaggaagaagttaaaactggacaaggagctc
aagatatcgtcctcccccatagcaccatcctgccctggctccagcaaagctgaagcccct
aagactgcggtggaagagaaggagcgcaagaagaagaagaagaagaaagagaaggccccg
agctccagcacactagcccccgcagcacaggagccggccaagggtgccggacacaagaga
cccctggccgacgtgtcggagtccaaagcgactggcgatggcgaagtcaagcacaagaag
agctccagcaagcgcagtgagcacacaaagactggcaagaagtcaccaaagagcagcttt
gcagtcccagaacccgcccagcccaaacggactccagcctcaaacagagtcctgctcaaa
ctggacgacaggcagtattctgtggagcatcacatgaaggaagccaaaaaactgaagcac
aaagctgatgccatgtccgagaaggtgggcaagtccttcatctacctggaagctgccctg
tcctttgtggagagtggtattgccatggagatggatccccagacgccaaagtcagcgtac
accatgttctctgagacggtggtcctgatcaggttcatcttaaaactgcggagctactcc
gacccagccagccctgcgtcagagaaagactttgccattttatgcatgaggttccagtcg
ctactgcagatggccatgttccgctacaaacgcgaagcagcacttaggtactccagaacc
ctcactgaccatttcaagagctgcaagacgtctccttcccctcgcgtctcaaaggctacc
agtaccccctcccagatgtctcccatggcgtctccggccagctccagcagctccagccac
agctcggccacggcgccggccaacacggtggcactgccacaggccatccaccaggtggcg
tccacctacgtcagcatcaccgccctcttcctcagcgcgcacagtgtctgggagcaggcc
gaggagatggcccccaaaggcagcggggtgctaggggagttggactctgccatcggccct
ttgactttgctgtccaccatgagcgcagtggtgcgctacacacggcagggcctccactgg
cttcgacaggactcccaacagacacactga
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