Alosa sapidissima (American shad): 121680611 Help Entry 121680611         CDS       T11137                                  Symbol nup54 Name (RefSeq) nucleoporin p54 isoform X1   KO K14308   nuclear pore complex protein Nup54 Organism asad  Alosa sapidissima (American shad) Pathway asad03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:asad00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     121680611 (nup54)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:asad03019]     121680611 (nup54) Messenger RNA biogenesis [BR:asad03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      121680611 (nup54) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup54 Nup54_C Motif Other DBs NCBI-GeneID:  121680611 NCBI-ProteinID:  XP_041915989 LinkDB All DBs Position 13:9772322..9782708 Genome browser AA seq 615 aa AA seqDB search MAFNFGGGAATNPASTSGFSFGSFAAKTSAPTAFGFGAPTTATASSGFGSFGTGFGAPTT TTTQSTGFNFGNTTTGFGGLGAVSTTAGGFSLGGFGINANPAAVNFNVGGFGAPTTTTTV FNFGNSIASAGAFGGFGTTTTSAAPGSTFSFATPSNTGGGLFGNPQNKGFGFSGLGAGAA APAGFGTGLTGAGLGFGGFNLPTQQQQQGGLFGQQAQAPAQSNQLINTASALSAPTLLGD ERDAILAKWNQLQAFWGTGKGFFNNNIPPVDFTQENPFCRFKAVGYSCTPGSKDEDGLLV LVLNRKEADVRAQQQQLVESLHKVLGGHQNLSVNVEAVKTLPDDQTEVIIYLVERSPNGT SKRVPASTLFSFAEQVNVKVQFQQLGVLMSLTRTALSPAQLKQLLQNPPAGVDPIIWEQA KVDNPDPDKLIPVPMVGFKELLRRLKIQDQMTKQHQTRVDIIANDISELQKNQATTVAKI AQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLN ELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQEGLSHLIGVIKDDMEDIKLIE HGLHDSVHIRGGKLS NT seq 1848 nt NT seq  +upstreamnt  +downstreamnt atggcgttcaattttggcggcggtgccgcaacaaatcctgccagcacttcaggattttca tttggttcattcgctgccaaaacatcagcgcccaccgcatttggttttggtgctcccaca acagctacagcttcttccggattcggtagttttggtacagggttcggtgctcctaccaca actactacccaatccactgggtttaattttggcaacacgaccacaggatttggggggctg ggtgcggtcagcaccacggctgggggttttagtttaggagggtttggcattaatgccaac ccagctgctgtcaactttaacgtggggggttttggggctcccaccaccacaaccaccgtt ttcaatttcggcaatagcattgctagtgcaggcgcatttggagggttcgggaccaccacc acttctgctgcccccgggtcgacatttagttttgccacaccctcaaacactggaggtggc ttgtttgggaatcctcagaataagggctttggcttctctggtctgggcgccggggccgct gcgccggccggctttggcacaggcttgaccggggccgggttgggctttggaggcttcaac ctgccaacgcaacagcagcagcaaggaggtctttttgggcagcaagcccaggctccagca cagtccaaccagctcataaacacagctagtgccctgtcagcgcctaccctgctgggtgac gaacgcgatgccatcctggccaagtggaaccagctgcaggcgttctggggcacgggcaag ggcttcttcaacaacaacatccccccggtggacttcacccaggagaaccccttctgcagg ttcaaggcagtgggctacagttgtactccagggagtaaggatgaggatgggctgctggtc ctggtgttgaacaggaaggaggccgacgttagggcccagcagcagcagctggtcgagtcc cttcacaaggtgctgggaggacaccagaacctctctgtcaatgtggaggctgtcaaaacc ctgcctgatgaccagacggaggtaatcatctacttagtggagcgctcgcctaacggcacg tccaagcgggttccagccagcacactcttcagcttcgcagagcaggtcaacgtcaaggtc cagtttcagcagctgggcgtgctaatgtccctcacgcgcactgccctctccccagcccag ctcaagcagctgctccagaacccacctgcaggtgtggatcctatcatatgggaacaagcc aaagtggataatcctgaccctgacaagctgatccctgtgccgatggtgggtttcaaggag ctgctccgtcggctgaaaatccaagaccagatgaccaaacagcaccagaccagagttgat ataattgctaatgacatcagcgagctgcagaagaaccaagcaaccacagtggccaaaatc gctcagtataagaggaagctgatggatttgtcccacagggtgttgcaggtgctgataaaa caagaaatccagagaaagagcggctacgccatccaagtggacgaggagcacctcagagtg cagctggacaccatccagtctgaactcaatgcccctactcagtttaagggcaggctgaat gaactgatgtcccagatccgcatgcagaaccactttggtgcggtccgctcagaggagagg tacagcgtggatgccgatctgcttagggagatcaaacagcatctgaaacagcaacaggag ggtctaagccacctgattggcgtcattaaagatgatatggaagacatcaaactcatcgag catggtctccacgacagcgttcacatacgagggggcaaactgagctga

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