Alosa sapidissima (American shad): 121680662
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Entry
121680662 CDS
T11137
Name
(RefSeq) fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121680662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asad00536
]
121680662
Glycosaminoglycan binding proteins [BR:
asad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121680662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
121680662
NCBI-ProteinID:
XP_041916071
LinkDB
All DBs
Position
13:13391704..13477968
Genome browser
AA seq
2908 aa
AA seq
DB search
MVWIKWTMAFVLGYVSLLGILMNTVMGQIPENHGRTQYDGSASSSRVRRRGKQDALTGPN
VCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCPSGHIAPTCATKSPQ
QCSIRCMNGGACAEDHCQCPKGYTGAHCGQPVCERQCQNGGRCIGPNRCACVYGFTGPQC
ERDYRTGPCFTQVNNQMCQGQVSGIVCTKTLCCATVGRAWGHPCEMCPAQPQPCRRGFIP
NIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHRQNEANQKCEDVDECAIIPR
ACDGGRCVNTVGSYTCVCPADLVPSADKTRCLDQHSGLCFSGLLSGRCTQELPGRFSKAQ
CCCDAGRCWARGNLPELCPVPGSEAHQRLCQEGAPVRPYPEGDPVIVGGRVSYPQGPKDY
DPTLNGRRVNGNGHPYPQTPVNGNGHRKHPVNGNGHKIPQQYDYATLNQTVDYCRQVQNL
CINGRCISLASSYRCECNKGYVLDVRGDCIDFDECASDPCSNGDCVNTPGSYYCKCHAGY
LRTPTKQTCIDIDECLHNGVLCNNGRCLNTEGTFQCICNAGFQLTPDRRNCVDHDECATT
NMCLNGMCINEDGSFKCICKPGFTLASSGRYCIDIDECQTPGMCMNGRCVNTDGSFRCDC
MAGLAVSTDGRSCVDTHMRSTCYGGIRKGVCVRPFQGAVTKSECCCANADYSFGEPCQPC
PAKNSGEFQALCGSGIGFSVDGTDINECALDPDICTNGVCENLRGSYRCICNVGYETDGS
GRNCVDIDECLVNRLLCDNGLCRNVPGSYTCTCPKGYLFRPDSETCEDVNECESNPCVNG
VCKNNAGSFACECSPGGKRDSTGLICIDSLKGTCWLHIQDGRCEVNINGGTLKSECCATL
GAAWGSPCEQCEIDPVCSRGFARPKGVTCEDVNECEVFPGVCVNGRCVNTHGSFKCQCPE
GLTLDSTGRLCVDVRSEHCYLTYDEDTCAQPVSGRFRMDACCCTVGAAWGKECEACPEPG
NRDYDLLCPRGPGFANRGDVLTGRPFYKDINECKVFPSICTHGKCRNTIGSFRCRCDNGF
ALDMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFDGYESGFMMMKNCMDIDECER
NPGLCRGGECENTDGSYECVCPHGHQLSTDGNACEDVNECELSSTLCRNGECVNVVGTYR
CTCHSGYQPTPDLQGCTDIDECTIENGGCDVHCTNSEGSYQCSCASGYALMPDQRSCADV
DECEEELGICDGGQCTNLPGEYHCLCFDGFMASLDMKSCIDVNECELNTNLCLFGECENT
KGSFICHCEVGYSVKIGTSGCTDVDECEVDAHNCDVHATCVNTPGGFHCSCREGWLGNGV
KCVDLDECTNGTHHCSVSAECVNTPGSYRCSCSPGFTGDGLTCSDMDECAENVNLCENGQ
CLNVPGGYRCECEMGFVPAPDSKTCQDIDECKFHSICVFGKCKNLPGMFRCICDDGYELD
RSGGNCTDVDECMDPINCVNGLCVNVPGSYECNCPTDFELNPTGVGCVDTRVGNCFREAT
PRGRGSLSCSVEVGVGVSRSSCCCSLGRAWGNPCELCPPINSSEYNTLCPGGEGFRPNPI
TIILEDIDECQELPGLCQGGNCVNTFGSFQCDCPPGYYLNVDSRICEDIDECVVNPGICG
PGTCYNTLGNYTCVCPQEYMQVNGGNNCMDMRKSLCYRNYNGTVCENELVFNLTRRLCCC
SYNVGKAWNKPCEACPTPATDEYRILCGNIVPGFKLDIETGKAIDIDECREIPGICANGV
CINQIGSFRCECPTGFSYNDLLLVCEDIDECSSGEILCQRNADCINSPGSYRCECSDGFN
LSPTGACIDRNECLEIPNVCSHGECMDIDGGYECLCHNGFRVSNNRRMCMDIDECVRQPC
GNGTCKNTVGSFNCLCHPGFEITHNNDCTDIDECTTSYGQICRNGRCINSIGSFQCLCDE
GYEPNLDGKNCVDVNECVILPGTCAPGTCQNLDGSFRCICPEGYRVQNEHCVDVNECVED
PNICLFGTCFNNPGSFECVCKPGFILSENGRRCYDKRESYCFTRFENGKCSLPQAFNTTK
AKCCCSNMPKEGWGDPCELCPKDSDAGFKDLCPFGFGIIPGFDDSRIDLNECVENPGICY
NGHCINTDGSFRCECPMGYTLNYTGVHCIDIDECLVGNPCGNGTCTNAIGGFECTCEEGF
EPGPMMTCEDINECGQNPLLCAFRCINTFGSYECSCPAGYTLREDGRMCKDLDECAEGLH
DCESRGMACKNLIGTFMCVCPVGMTRRLDDELCQDENECRTKPGICENGRCVNTIGSYMC
ECGEGFQPDSTRTQCLDYREGFCFTEVLQTMCQMSSSSRTPSTKSQCCCDGGRGWGNQCE
LCPLPGTAKYKKLCPHGHGYATDGRDIDECKLIPDVCKNGKCINTMGSYKCHCKPGYTAS
ISGTACDDQDECSMSPKPCNFICKNTEGSYACSCPRGYTLQEDGRTCKDLDECQTKKHNC
QFICVNTIGGFTCKCPPGFAQHHTACIDNNECAAEPTLCGAKGICQNTPGSFNCDCQHGY
SLDNTGLHCEDVDECKSTHRCQYGCQNILGGYRCSCPQGYTQHYQWNQCVDENECSNPSS
CGSASCYNTLGSFKCACPSGYSFDHPSSSCRDLDECSSRKNPCNYGCSNTEGGYLCGCPP
GYYRVGQGHCVSGTGFGKGLYTPHQGGQGVDEDNALSPEACYECKINGHSKRGIRRRRDA
NETLAEEEPEVSLASLDIDEPLTLMLNLSQLDPGQHLLELRPALRPLDGHVRYAIAGGNG
AGVFRLEHSDDGLTYLHLASSAGSEGEEAWRGQSSRLTPGSYTLEISSAPLYGPAQLRAL
RNIKDRDYLSGELGENLHMRLHIKLQEN
NT seq
8727 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggataaagtggaccatggcattcgtactcggatatgtgagtttgttgggtatt
ttgatgaatactgttatgggacagattcctgagaatcacgggaggactcaatatgatggt
tctgcatcaagtagcagggtacgcagacgtggaaaacaagatgcgctaacaggaccaaat
gtgtgtggatctcgtttccattcctactgctgtccaggctggaaaacgttgccagggggc
aaccagtgtatcgtgcccatatgccgtaacagctgtggagatggtttctgctcacgcccc
aacatgtgcacttgtccaagtggtcacattgccccaacctgtgcgaccaaatcccctcag
cagtgtagtatcaggtgtatgaatggcggagcctgcgcagaagaccactgccagtgcccg
aagggatacacaggagcccactgtggacaacccgtctgtgagaggcagtgccagaatggt
gggcgctgcatcgggccgaaccggtgcgcctgtgtctacggcttcactgggccccagtgt
gagagagactaccgtacagggccctgctttacccaggtcaacaaccagatgtgccagggc
caggtgagtggtatcgtctgcaccaagacgttgtgctgtgccaccgtgggccgagcctgg
ggccacccctgtgagatgtgcccagcccagccccagccctgccgccgtggcttcattccc
aacatccgcaccggggcatgccaggatgttgacgagtgccaggccattccagggctgtgc
caaggaggcaactgcattaacaccgtgggctcatacgagtgcaagtgcccagctggtcat
cgtcagaacgaagccaatcagaagtgtgaagatgtggacgagtgtgccatcatcccacgc
gcgtgtgatggcggccggtgcgtgaacaccgtgggcagctacacctgtgtgtgccctgcc
gacctggtgccctctgcggacaagacccgctgcctagaccagcactcgggcctgtgtttc
tctggactgctgagtggccgctgcacccaggagctgccaggccgcttcagtaaggcccag
tgctgctgcgacgctggacgctgctgggcaagaggcaacctgccagagctgtgccccgtc
ccaggctcggaggcgcaccagagactgtgtcaggagggagctccggtgcggccgtaccca
gagggggatccagtgatcgtaggcggccgagtttcctacccacagggccccaaagactac
gaccccactctcaatggccgcagggtcaacggaaacggacacccctacccccagaccccg
gtgaatgggaatggccacaggaagcaccctgtcaatggcaacggtcacaaaataccccag
cagtatgactatgcgactctgaaccagactgtggactactgcaggcaggtgcaaaatctg
tgtataaacgggcgctgcatctctttggcgtcgagctaccgctgtgagtgtaacaagggc
tacgtgctggatgtcagaggagactgcatagattttgatgagtgcgcctcagacccctgc
tctaacggagactgcgtcaacacccctggctcctactactgcaaatgccacgcaggctac
ctcaggactcccaccaagcagacatgcatagacatcgacgagtgcctgcacaacggggta
ctgtgcaacaacggccgctgtctgaacacagagggcaccttccagtgcatctgcaacgca
ggcttccagctcacccccgacagaaggaactgcgtggaccatgatgagtgtgccaccacc
aacatgtgtctcaatggcatgtgcatcaacgaggacggcagctttaagtgcatctgcaaa
ccgggcttcacgctggcctccagtggccgctactgcatagatattgatgagtgtcagact
ccaggcatgtgtatgaacggtcgctgtgtgaacaccgatggctccttccgctgtgattgt
atggcaggacttgccgtcagcacagatggacggtcctgcgtagacacacacatgcgcagc
acctgctacggaggcatcaggaagggcgtgtgtgttcggccattccagggagcggtcacc
aagtccgaatgctgctgcgccaacgccgattacagcttcggcgagccctgccaaccctgc
ccagccaagaattcaggagaattccaggcattgtgtgggagtggtattggcttctcagta
gatgggacagacattaacgagtgtgcactggaccctgacatctgtaccaacggcgtgtgt
gagaacctgaggggcagctaccgctgcatctgtaacgtgggctacgagaccgacggcagc
ggcaggaactgcgtggacattgacgagtgcctggtgaaccgtctgctgtgtgacaacggc
ctgtgccggaacgttccgggaagctacacttgcacctgtccaaagggctacctcttcagg
ccggactcggagacgtgcgaagatgtgaatgagtgtgagagtaatccgtgtgttaacggg
gtgtgtaagaacaatgctggctccttcgcctgtgagtgctcgccaggcggcaagagggat
tccacaggactcatctgcatcgacagcctaaaaggcacctgctggctccacatccaagat
ggccgctgcgaggtcaacatcaacggcggcacactgaagtccgagtgctgtgccaccctg
ggcgccgcctggggcagcccctgcgaacagtgcgagatcgatcctgtttgctccagaggg
ttcgctcgtccaaaaggggtcacatgtgaagacgtgaatgagtgtgaggtgttccctgga
gtgtgtgttaacggccgctgtgtgaacacccatggctctttcaagtgccagtgtcccgag
ggcctgaccctggactccactggacgcctgtgtgtcgatgtccgctcggagcactgttac
ctgacctatgacgaggacacttgcgctcagcccgtgtctggaaggttccggatggacgca
tgctgctgcacggtgggggccgcctgggggaaggagtgtgaggcgtgtccggagcctggt
aaccgcgactacgacctcctctgcccgcgaggacccggctttgccaaccgaggcgacgtt
ctcaccgggagacccttctacaaggacatcaatgaatgtaaagtgttccccagcatctgc
acccatggcaaatgccgcaacaccattggcagcttcaggtgtcgctgtgacaacggcttc
gccctcgacatggaggagcgcaactgcactgacattgacgagtgccgtatctcaccggac
ctgtgtggtcatggcacctgcgtgaacacacctggcagcttcgagtgtgagtgctttgac
ggctacgagagtggcttcatgatgatgaagaactgcatggacattgacgagtgtgagcgg
aaccctggcctgtgccgcggaggcgagtgtgagaacactgacggcagttacgagtgtgtg
tgtccgcacggacaccagctgtctacagatgggaatgcttgcgaggatgtgaacgagtgt
gagctgagctccaccctgtgtcgaaacggcgagtgtgtgaacgtggtgggcacataccgc
tgcacctgccactccggctaccaacccacacctgacctacagggatgcacagacattgac
gagtgcaccatagagaacggtggctgtgatgtgcactgcaccaactcggagggcagctac
cagtgcagctgtgcctcaggctatgccctcatgcccgaccagaggagctgtgctgatgtg
gatgaatgtgaggaggagctgggcatctgtgacggaggccagtgcaccaacctccctggg
gagtaccactgtctgtgctttgatggcttcatggcgtccctggacatgaagagctgcata
gatgtgaacgagtgtgagctgaacaccaacctgtgcttgtttggagaatgtgagaacacc
aagggttccttcatatgccactgtgaagtgggctactctgtcaagatcggcacgtcaggc
tgcacagatgtggacgagtgcgaggtggacgcccataactgtgacgtccacgccacctgt
gtcaacaccccggggggcttccactgctcctgtcgcgagggctggctgggcaacggggtc
aagtgtgtcgaccttgacgagtgcaccaatgggacgcaccactgcagtgtcagcgctgag
tgtgtcaacacacctggctcctaccgctgcagctgctcaccgggcttcactggagatggc
ctcacctgctcagacatggatgagtgcgctgagaacgtgaacctgtgtgagaacggccag
tgtctgaacgtgccgggaggctaccgctgtgagtgtgagatgggcttcgtcccagcccct
gacagcaagacctgccaagacattgatgagtgcaaattccatagcatttgtgtgtttggc
aaatgcaagaacctccctggaatgttccgttgcatctgtgacgatggctatgagctggat
cgctctggaggaaactgcacagatgtagacgagtgcatggaccctataaactgtgtgaat
ggcctctgcgtgaacgtccctggatcgtatgagtgtaactgcccaactgactttgagctc
aaccccactggagtcggctgtgtcgacactcgtgtggggaactgtttccgggaggcgact
cctcgtggacggggcagtctgtcctgcagcgtggaggtgggggtgggcgtgagccgctct
tcctgctgctgctccctgggccgggcctggggaaacccctgtgaactctgcccccccatc
aactcctcggagtacaacaccttgtgtccaggtggagagggcttcagacctaatcccatc
accatcatactggaagacattgatgagtgccaggagttgccgggtctttgccagggtggg
aactgtgtgaacacctttgggagtttccagtgtgattgtcctcctggctactacctcaat
gtggacagccgcatctgtgaagacatcgatgagtgtgtggtcaacccgggcatctgcgga
cctggcacctgctataacaccctgggcaactacacctgtgtgtgcccacaggagtacatg
caggtcaacgggggcaacaactgcatggacatgaggaagagtctctgttacaggaactat
aatggcacggtgtgtgagaacgagctggtcttcaacctgacccgccggctctgctgctgc
tcctacaacgtgggcaaagcctggaacaagccctgcgaggcctgcccaacccctgccaca
gatgagtatcgcattctctgtgggaacatagtgccagggttcaaactggatattgagact
ggtaaagccatagacatcgatgagtgtcgggagatccctggcatctgtgccaacggtgtt
tgcatcaaccagatcggcagtttccgctgtgaatgccccacaggtttcagctacaatgac
ctcctgcttgtgtgtgaggacattgatgagtgcagcagtggtgagattctgtgccagagg
aacgccgactgcatcaacagtcccgggagctatcgctgcgagtgctccgacggcttcaac
ctctcccccaccggggcctgcatcgaccgcaacgagtgcttggagatccccaacgtctgc
agccacggggaatgcatggacatcgacggcggctacgagtgtttgtgccacaacggcttc
agggtgtctaacaaccggcggatgtgcatggacatcgatgagtgtgtgcgtcagccttgt
ggaaatggcacatgcaagaacactgtgggctcctttaactgcctctgtcaccctggcttt
gagatcacgcacaacaatgactgcacagacatcgatgagtgcacaacgtcatacggtcag
atctgcaggaatggccgctgcatcaacagcatcggctcgttccagtgtctgtgtgatgag
ggctacgaacccaatctggacggcaagaactgcgtcgacgtgaacgagtgtgtcatcctg
ccgggaacgtgtgctcctgggacgtgtcagaacctggatgggtcattccgctgcatctgc
cccgaaggttacagggtgcagaacgaacactgtgtagatgtcaatgagtgtgtggaagat
ccaaacatctgcctgtttgggacctgtttcaacaatcctggcagctttgagtgtgtttgc
aagcctgggttcatcctgtcggagaatggacgcagatgttatgataagcgggagagctac
tgtttcacgcgctttgagaatggcaagtgctcgctcccacaggccttcaacaccaccaag
gccaagtgctgctgcagcaacatgcccaaggagggctggggggacccctgtgagctctgc
cccaaggacagcgacgctggattcaaggacctctgtccatttggcttcggcataatccct
ggatttgatgactcgcgtatcgacctgaatgaatgcgtggagaatccaggcatctgctac
aacgggcactgtatcaacactgacggttccttccgctgtgaatgtcctatgggctacaca
cttaactacactggcgtgcactgtatcgacattgatgagtgtttggtgggaaacccatgc
ggtaacggcacctgcaccaacgcgatcgggggctttgagtgcacctgtgaggaaggcttt
gaaccaggacccatgatgacttgtgaagacataaacgaatgcgggcagaacccgctgctc
tgtgccttccgctgcatcaacacattcggcagctacgagtgcagctgtccagcagggtac
acgctccgggaggacggcaggatgtgcaaagacctggatgagtgtgcggagggcctgcat
gactgtgagtcgcggggcatggcttgtaagaacctcatcggcaccttcatgtgtgtgtgc
ccggtaggcatgacgcggcgcctggacgatgagctgtgccaagatgaaaacgagtgccgc
actaagccgggtatctgtgagaacggccgctgtgtgaacaccattggcagctacatgtgt
gagtgtggggagggattccagccggactccacccgcactcagtgcttagactaccgggag
ggcttctgcttcacagaggtgctgcagaccatgtgccagatgtcctccagtagcaggacc
ccctccaccaagtcccagtgctgctgtgacgggggccggggctggggcaaccagtgtgag
ctctgcccgctgcccggcactgccaagtacaagaagctgtgcccacacggccatggctac
gccactgacggcagagacatagacgagtgcaaactcatcccagacgtatgtaagaacggg
aaatgcatcaacaccatgggctcctacaagtgccactgcaagcctggctacaccgcttct
atcagtggaacagcatgtgatgaccaggatgaatgttccatgtctcccaagccgtgcaac
ttcatctgcaaaaacacggagggcagctacgcgtgctcctgtccccgtggttacacactg
caggaggatggcaggacctgcaaagatctggatgagtgtcagaccaagaagcacaattgc
cagttcatctgtgttaacactatcggcggcttcacctgcaagtgccctcctggtttcgct
cagcaccacacagcctgtatagacaataacgagtgtgcagcggagcccaccctctgtgga
gccaagggcatctgccagaacacgccaggcagcttcaactgtgactgccagcatggctac
tccctggacaacactggcctgcactgcgaagatgtggatgagtgtaagagcacccacagg
tgtcagtatggctgccagaacattctgggaggctatcgctgcagctgccctcaaggctac
acacagcactatcagtggaatcagtgtgtggatgaaaacgagtgctcgaaccccagcagc
tgcggctcggcgtcctgctacaacacactgggcagcttcaagtgcgcctgcccctcgggc
tactccttcgaccatcccagcagcagctgccgtgacttggacgagtgcagctcccgcaag
aacccctgcaactacggctgctccaacactgaggggggctacctgtgtggatgccccccg
ggctactacagagtaggccaaggtcactgtgtgtcaggcactggctttgggaaaggcctg
tacacgcctcatcaaggaggacaaggagtggacgaggacaacgccctctcccctgaggcc
tgctacgagtgtaagatcaacggccactccaagagggggatacgcaggagaagggacgcc
aatgaaaccctagccgaagaggagcccgaggtgagccttgctagcctggacattgacgag
ccgctgacactaatgctcaacctctcccagctggaccccggccagcacctcctggagctg
cggcctgccctgcggcccctcgacggccacgtgcgttacgccatcgccggcggcaacggg
gccggcgtcttccgcctggagcacagcgacgacggcctcacttacctgcacttggcgtcg
tcggcaggatcggaaggagaggaggcgtggcgggggcagtcgagtcggctgaccccgggg
agctacacgctggagatcagcagtgcaccactatacggtccagcccagcttcgggcgctc
cgcaacatcaaggacagagactacctctcgggggagctgggcgagaacctgcacatgaga
ctgcacatcaagctgcaggagaactag
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integrated database retrieval system