Alosa sapidissima (American shad): 121680746
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Entry
121680746 CDS
T11137
Symbol
si:ch211-243g18.2
Name
(RefSeq) keratin, type I cytoskeletal 18 isoform X1
KO
K07604
type I keratin, acidic
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121680746 (si:ch211-243g18.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121680746 (si:ch211-243g18.2)
04147 Exosome [BR:
asad04147
]
121680746 (si:ch211-243g18.2)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121680746 (si:ch211-243g18.2)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121680746 (si:ch211-243g18.2)
Exosomal proteins of other body fluids (saliva and urine)
121680746 (si:ch211-243g18.2)
Exosomal proteins of colorectal cancer cells
121680746 (si:ch211-243g18.2)
Exosomal proteins of melanoma cells
121680746 (si:ch211-243g18.2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TBCA_PH
Fez1
Rab11-FIP3
Laminin_II
DUF6959
Rod_CreS
ATG16
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
121680746
NCBI-ProteinID:
XP_041916210
LinkDB
All DBs
Position
13:11851001..11858291
Genome browser
AA seq
439 aa
AA seq
DB search
MASSYSVRSFSVGRQPSFSSLSLRDSGRKRSVASAVSFSSPLTRSASVSHDLNVLSHNGL
GNSTNEKEAMQSLNNRLANYLDKVRTLERSNADLELKIKKLMIERVPKGHDIDSMMAQAH
ALEQELRKKTLENARLMLEIDNAKLAADDFRIKWEAESAMTQSVERDCIALKKAKSDHDQ
INASLRGDLDSLKEELYFLKKNHEEEMDTWRSRIACEEVNVEVDAARGPELGAVLSDLRS
QYEGIVRKNKEQAELWYRKKVRIPGSRTPGSLCFNLNLDIVQTEVKESNEALRSAQNELS
ERQRFLQTLEVELENLHKQLSTLEGNLGETNQKYALEMDRLQATLSQLEDDLSQLRLDMQ
RNKTDYEQLLRIKQNLEMEIATYRRLLEGEEGMKEVPPPPKKEPDVRTRKIVKVVTQTMI
NGKVVDESSEVEQIEETKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagctactcggtgcggagcttttccgtgggccgccagccctccttctccagc
ctgtcgctgcgggatagcgggcgcaagcggtcggtggcctccgccgtgtctttctccagt
ccgctgacgcgctcagcctcggtcagccacgacctcaacgtgctgtcgcacaacggcctg
ggcaacagtaccaatgagaaggaggccatgcagagcctcaacaaccggctggccaactac
ctggacaaggtgcgcacgctggagcgctccaacgccgacctggagttgaagatcaagaag
ctgatgatcgagcgcgtgcccaagggccacgacattgacagcatgatggcccaggcccat
gccctggaacaggagttgaggaagaagacactggagaatgctcgactcatgctggagatt
gacaatgccaagctggctgctgatgactttaggatcaaatgggaggccgagagtgccatg
acccagtctgtggagagggactgcatagccctgaagaaggccaagtctgaccatgaccag
atcaatgccagtttgcggggtgacctggacagtctaaaggaagaactctacttcctgaaa
aagaatcatgaggaggaaatggatacatggagatctcgcattgcatgtgaggaggtgaac
gtggaggtggatgcagcgcgcgggccagagttgggtgctgtcctgtcagatctgaggtca
cagtatgagggcatcgtccggaagaacaaggagcaggcagagctatggtaccgcaagaag
gtcaggattccaggatccaggactcctggatctctttgttttaatctaaacctggacata
gtgcagacggaggtgaaggagagcaacgaggcactgcgcagtgcccagaacgagctcagc
gagagacagcgcttcctgcagaccttggaggtggagctggagaacctccacaaacagctg
tcaactctggagggtaacctgggggagacgaatcagaagtatgcgctggagatggaccgt
ctgcaggccacgctctcacagctggaggatgacctgtcacagctgcgcctggacatgcag
cgcaacaagaccgactacgagcaactgctgcgcatcaagcagaacctggagatggagatt
gccacctacaggagactgctcgagggagaggaagggatgaaagaggtcccacctccacca
aaaaaggagcctgatgttagaaccaggaagatagtaaaggtggtcacccagaccatgatc
aatggtaaagtggtcgatgaatcaagtgaagttgaacagatcgaggaaaccaagaagtga
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