KEGG   Alosa sapidissima (American shad): 121680769
Entry
121680769         CDS       T11137                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121680769 (ubap2a)
   03400 DNA repair and recombination proteins [BR:asad03400]
    121680769 (ubap2a)
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    121680769 (ubap2a)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121680769 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 121680769
NCBI-ProteinID: XP_041916236
LinkDB
Position
13:7394360..7413932
AA seq 1222 aa
MMTSLGSDRARGSRDKVLPATTQNSQPQKQPQATAEQIRLAQMIYDKNDADFEDKVKQLM
EVTGKNQDECMVALHDCNEDVNRAINFLLEGTSDTTSSWETVGKKKVGKDSSSSESKENR
ENRENRDKRGEREGSRGRGGASKKGRGGSRSRPGEVRAEENGVDAAHVERGADRGRRGRG
RVSGSRGRGRAPGTSRFTAQGMGLQPVLLTAEAARDRKRTFNPADYTTEQGSGGAHTENW
ETGANDTADGPVAWRGPLEDWSAEDWSEDLSETKVFTASCPPATENHVTPGQSLDLASLL
QKPAAREEVGGALKAPSHSLVFTNSHHHTTRNGGTTPGTASYAHATLSSVLGSGFGELGG
PKLGQSAGAQILEQLKGPGLGPLPTQPPSSTGPSHAPVVGGLGGSAAPAAPPSSSTPAPS
SWDMKPPVTQSSMPMPSQFSREFKLQPEPSLVLSQLAQRQTPGALSHASPLPLARQQQQQ
QQPPSPPLATSAPSGALEPFPKPQEPSLQRDGPSLAAVQQQQSDAQAVANAQQQRQMKTQ
KRRIPPSSKIPSSAVEMPGSADVPGLNVQFGALDFGSESALPDFSAPESCANSSSTNSSS
EAPRDPPAVSQTQSSLYSKPISESLTNPVPLLLPLSSTDSIYPSASVPLPSLAPSLSTPS
TVPMPSTTPSSSSVSSAASSFDCAVAPHSRLAFSQSKDAPGPVTNGYNGVRTSAALDSTS
ASSTPKPESPSLGNAGSGPPSAPSAILPPSVPPHSTPLSSLAAELPSASLPPLSSHVSSG
HSSVSALATSSSLAQHSSVDSVNSLAPPSSVAYSGVQTAGLPISVGGSVGIASSSAGLHS
SGVLGLTANGTTTNANTASAIRTTQLLSSSSKAPPNLSQGVPPLLPNQYIMGPGGLLPAY
PQIYGYEDLHMLQSRLPMDYYGITFPGPAAALSSRDGGLANNPYSGEVTKFGRGDSTSPA
PPTSLSAAHQAPPPQAPPQGQNASGSAPQSQGHHGAQQAFLNPALPPGYSYTGLPYYPGM
PGVPNAFQYGPTMFVPPASAKQHGMGLSNAPQATPFQQPSSYGQHTFSSGYDDLTQGPAG
ADYSKGYSSSSQSQAKSAASGPGKGVSVTSSNSGVPDISGTVYNKTQSFDKQGFHAGTPP
PFSLPSALGGTGPLTPGGAPGYAPAPFLHILPPHQQPHSQLLHHHLSQDTQGGPSQRSQS
SSMQQKTQVNKSSYGSSPYWGN
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgatgacttcattaggcagcgaccgagcccggggctctcgggacaaggtgctgcctgca
accacacagaactctcagccacagaaacagccacaggcaacagccgaacagatccgactt
gcccagatgatctacgataagaatgatgcagactttgaagacaaagtcaaacagctgatg
gaagtgaccgggaagaaccaggatgagtgcatggtggcactgcacgactgcaatgaggat
gtgaaccgagccatcaacttcctgctggaagggacctcggacacgacctcctcttgggag
acggtagggaagaagaaagtggggaaagacagcagctcctcagagagcaaggagaaccgt
gagaaccgcgagaaccgggacaagcgcggagagcgagagggcagccgcggacgcggcggg
gccagcaagaagggccggggaggcagccgcagccggcccggtgaggtgcgagcagaggag
aatggggtggacgctgctcacgtggaaagaggtgctgaccgtgggcgcaggggaagagga
cgggtgtcaggaagcaggggaagaggcagagccccagggaccagccggtttacagcacag
ggaatggggcttcaaccagtgctgctgacagctgaagcagcaagagacagaaagaggacc
ttcaaccctgcggactacaccacagagcaaggatcgggtggcgcacacacggagaactgg
gagacaggggccaatgacaccgcagatgggccagtggcttggaggggccctctggaggac
tggtccgctgaggactggagtgaggatctctccgagaccaaagtgttcaccgcctcttgt
ccacctgctacggagaaccacgtcacacctggccaaagtctggacttggcctctctgctg
cagaagccggcggccagggaggaagtgggtggggccctgaaggcgccttcccacagcctg
gtgttcaccaactcccaccaccacactacccgcaacgggggcactacaccgggcactgcc
agttacgcacacgccaccctgtcgtctgtgctgggctctggtttcggcgagctgggcggc
cccaagctgggtcagtctgccggagctcagatcctggagcagctgaagggaccaggcctg
gggccgctgcccacccagccccccagcagcacggggcccagccacgcccctgtggtgggc
ggcctggggggatcggcggcgccggccgcgcctccctcctcgtccacccctgctccatcg
tcatgggacatgaagccacctgtgacgcagagctccatgcccatgccctcgcagttcagc
cgtgagtttaagctgcagccggagccgtctctggtgctgagccagctggcgcagaggcag
acgcccggcgccctgagccacgccagccccctccccctggcccggcagcagcagcagcag
cagcagccccctagtcccccgctggccacctctgcccccagcggcgccctggagcccttc
cccaagccgcaggagccctcgctgcagcgcgacggcccctccttagccgccgtgcagcag
cagcagtctgacgcacaggccgtggccaacgcacaacagcagaggcagatgaagacgcag
aaacgcaggatacctccctcttccaagatcccctcgtctgcagtggagatgccgggctca
gcagacgtgccggggctgaacgtgcagttcggagcactggactttggctcggagtcggcc
ctgccggacttcagcgcgcctgagtcctgcgccaacagcagcagcaccaacagcagcagc
gaggcacccagagaccctcctgctgtcagtcaaacacaaagcagcctctactccaaacct
atcagtgagtctctgaccaacccggttcccctgctgctgcccctgtcctccacggacagt
atctacccctcggcctccgtgcccctgcccagcctggcgccctcgctcagcacccccagc
acggtgcccatgccctccaccaccccctcctcttcctccgtctcctcggcggccagcagc
ttcgactgtgccgtagccccgcactcgcggctcgctttctcccagagcaaagatgcccct
ggccctgtcacgaacggttataacggtgtgaggacatctgctgctcttgactccacatcc
gcgtcctccacccctaaaccggagtcaccgtctctgggcaatgcgggcagcgggcccccc
tctgccccctcggccatcctgcccccttccgtgccccctcacagcacaccactctccagc
ctggcagccgagctcccatcagccagcctgccccctctcagcagtcatgtaagcagtggc
cactcctcggtctcagcacttgctaccagctcttctctcgcacagcactccagtgtggac
agcgtgaactcgctggctcccccctcctctgtggcgtactcaggggtgcagacagcaggc
ctgcccatcagcgtcggcggctccgtgggcatcgccagcagcagcgccggcctgcacagc
tccggagtgctgggcctcaccgccaacgggaccacaacgaacgccaacacggcgtcggcc
atcaggaccacacagctgctgtcctcctccagtaaagctcctcctaacctgtctcagggg
gttcctcctcttctgcccaaccagtacatcatgggtcctggaggcctcctgccagcatac
ccgcaaatctatggatacgaagacttgcacatgctgcagtctagattacccatggactac
tacggaatcacattcccaggccctgcggcggctctctccagcagagacgggggccttgcc
aacaacccttactcaggtgaagtcacaaagtttgggcggggcgactccacctccccggcg
ccccctacctccctgtcggctgctcaccaggcgccccctccccaggcccccccgcagggc
cagaacgccagcggcagcgctccccagtcgcagggccaccacggcgcacagcaggccttc
ctcaaccctgcgctgcccccaggctacagctacacgggcctgccctactaccccgggatg
cccggcgtgcccaacgccttccagtacggccccactatgttcgtgccgccggcctcagct
aagcagcacggtatgggcctgagcaacgcccctcaagccacgccattccagcagcccagc
agctacggccagcacacctttagctcagggtacgacgacctgacgcagggtccggcagga
gcagactacagcaaaggctacagcagctcttcccagtcacaggccaaatctgctgcctcc
ggcccggggaaaggtgtctctgtgacgtctagtaactccggtgtgccagatatcagtgga
acagtttacaataagacccagtcgtttgataagcagggtttccatgctggtacccctccc
cccttctccctgccgtctgccctggggggcactgggccgctcacccctgggggggctccg
ggctacgcccccgcccccttcctgcacatcctgcccccccatcagcagccccactcccag
ctcctgcaccaccacctgagccaggacacacagggtggtccaagccagaggagccagtcc
agcagcatgcagcagaagacacaggtcaacaagtccagttacggcagctccccttactgg
ggcaactaa

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