Alosa sapidissima (American shad): 121680840
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Entry
121680840 CDS
T11137
Name
(RefSeq) myosin heavy chain, fast skeletal muscle-like
KO
K24220
myosin heavy chain 1/2/3/4/8/13/7B/15
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121680840
04820 Cytoskeleton in muscle cells
121680840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121680840
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121680840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
Rod_CreS
CCDC39
FKBP15
CC_Liprin_beta
CCDC89
CEP135_TSGA10_CC
OVT1
DUF848
IQ
Trimer_CC
NPHP3_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
121680840
NCBI-ProteinID:
XP_041916320
LinkDB
All DBs
Position
13:complement(17165011..17175710)
Genome browser
AA seq
1939 aa
AA seq
DB search
MGDGDMAAYGAAAIYLRKPERERLEAQTRPFDAKTACFVVDKEELYVKGTIKKKEGGKVV
VETLETKEEKTVKEDEIFPLNPPKYDKIEDMAMMTHLNEASVLYNLKERYAAWMIYTYSG
LFCVTVNPYKWLPVYDQEVVDAYRGKKRVEAPPHIFSVSDNAFQFMLQDRENQSVLITGE
SGAGKTVNTKRVIQYFATIAVSSGKKSEASAGSSGKIKGSLEDQIIAANPLLEAYGNAKT
VRNDNSSRFGKFIRIHFATTGKLASADIETYLLEKSRVTFQLPDERGYHIFFQMMTNHKP
EIIEMSLITSNPYDFPMCSQGQITVASINDKEELEATDDAIDILGFNAEEKVTIYKLTGA
VLHHGNMAFKQKQREEQAEPDGTESADKVAYLLGLNSADMLKALCYPRVKVGNEYVTKGQ
TVPQVNNAVSALSKSIYERMFLWMVIRINQMLDTKQPRQFYIGVLDIAGFEIFDYNSMEQ
LCINFTNEKLQQFFNHTMFVLEQEEYKKDGIVWDFIDFGMDLAACIELIEKPMGIFAILE
EECMFPKASDTTFKNKLYDQHLGKNKAFEKPKPAKGKAEAHFSLVHYAGTVDYNVSGWLD
KNKDPLNDSVIQLYQKSGVKLLPVLYPPVVEEPAGGAKKGGKKKGGSMQTVSSQFRENLG
KLMTNLRSTHPHFVRCLIPNEIKKPGYMQNFLVIHQLRCNGVLEGIRICRKGFPSRILYA
DFKQRYKVLNASVIPDGQFIDNKKASEKLLGSIDVDHTQYMFGHTKVFFKAGLLGDLEEM
RDEKLASLVTMTQALCRAYLMRKEFVKMMERREAIFTIQYNIRSFMSVKTWPWMKVYYKI
KPLLQSAETEKELANLKEEHGKLKEVYAKVEARKKELEEKMVSLVQERNDLALQVASGNE
GLNDAEERCEGLIKSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDD
LELTLAKVEKEKHATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDK
VNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERTKRKLEGDLKLSQENIMDLENDKQQS
EEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQR
ADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQ
ADSVAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLSSNMEAVAKTKSNLEKMCRTLEDQL
GEVKAKSDESARQNNDLSAQKARLQTENGELGRQVEEKEALVSQLTRSKQAFTQQIEELK
RLNEEEIKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYE
TDAIQRTEELEESKKKLAQRLQEAEEQIEAINSKCASLDKTKQRLQGEVEDLMIDVERAN
ALAANLDKKQRNFDKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEEALDQLE
TLKRENKNLQQEISDLTEQLGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEES
KILRVQLELNQVKGEVDRKLAEKDEEMEQIKRNSQRVIDSMQSTLDAEVRSRNDALRIKK
KMEGDLNEMEVQLSHANRQAAESQKHLRTIQGQLKDAQLHLDDAVRGQEDMQEQAAMVER
RNGLMVAEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSLINTKKKLEADLVQ
VQSEVDDIVQEARNAEDKAKKAITDAAMMAEELKKEQDTSSHLERMKKNLEVTVKDLQHR
LDEAENLAMKGGKKQLQKLESRVRELEGEVDAEQRRGVDAVKGVRKYERRVKELTYQTEE
DKKNINRLQDLVDKLQLKVKAYKRQSEEAEEQANNHLSKFRKVQHELEEAEERADIAESQ
VNKLRAKSRDGGKGKEAAE
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggtgatatggctgcgtatggcgcagctgccatctaccttcgtaagcctgag
agggagagacttgaggcccaaaccaggccctttgatgcaaaaactgcttgctttgtggtt
gataaagaggagttgtacgtcaagggtacaattaaaaagaaggaaggtggcaaagttgtt
gttgaaacgcttgaaaccaaggaggaaaagacagtgaaggaagacgaaatcttcccctta
aatcctcccaaatacgacaaaattgaggacatggccatgatgacccacctcaatgaagcc
tctgtcctgtataacctcaaagagcgttatgcagcatggatgatctatacctactctgga
cttttctgtgtcactgtgaacccctacaagtggctcccagtatacgatcaggaagtggtg
gatgcctacagaggcaagaagcgtgtggaggccccgcctcacatcttctctgtctctgac
aacgcatttcagttcatgctccaagacagagagaatcagtctgtcctgattaccggagaa
tctggtgctggcaagactgtaaacaccaaacgtgtcatccagtactttgcaacaattgca
gtgtctagtgggaagaagtcagaggcatcagccggcagcagtggaaaaattaagggctct
cttgaagaccagattattgctgccaacccactgctggaggcttatggtaatgccaagact
gtgaggaatgacaactcttcacgttttggaaaattcatcagaattcactttgccacaact
ggaaaactggctagtgctgatattgagacttacctgctggagaagtctagagtgacattc
cagcttcctgatgagagaggctaccacatcttctttcagatgatgaccaaccacaagcct
gaaattatagaaatgtccctcatcacatccaacccctatgacttcccaatgtgcagtcag
ggtcagatcactgtggccagcattaatgacaaagaggagttggaggccacagatgatgcc
attgacatcctgggtttcaatgcagaggagaaagtcaccatttacaagctgactggtgct
gtgctccatcatggcaacatggcgttcaagcagaagcagcgcgaggagcaggctgagcct
gatggcactgagagtgctgacaaagtcgcttacctcttgggcctgaactccgctgacatg
ctgaaggctttgtgctacccaagagtgaaagtcggaaatgagtatgtcaccaagggtcag
actgtgccacaggtcaataacgcagtgtcggccttgtccaagtccatctatgagaggatg
ttcttgtggatggtcatccgtataaaccagatgctggacactaaacagccaaggcagttc
tatatcggtgtgctggatattgctggctttgagatttttgattacaacagcatggaacag
ctgtgcatcaacttcaccaatgagaaactgcaacagttcttcaaccacaccatgttcgtt
ctggagcaagaggagtacaagaaagatggcattgtatgggatttcattgacttcggcatg
gacttagccgcttgcattgagctcattgagaagcctatgggaatctttgccatccttgaa
gaggagtgcatgttccccaaggcctctgacaccactttcaagaacaagttgtatgaccag
catcttggcaaaaataaggcctttgagaagcccaagcctgctaaaggcaaggctgaggcc
cacttctccctggtgcactatgccggcactgtggactacaatgtttctgggtggctggac
aagaacaaggatccactgaacgattctgttatacagctgtaccagaagtcgggagttaaa
ctcctgcctgtcctgtacccacctgttgttgaagagcctgctggtggcgctaagaagggt
ggtaagaagaagggtggctccatgcagactgtgtcatcacagttcagggagaacttgggc
aaactgatgaccaacttgaggagcacccatccccactttgtgcgttgtctgattccaaat
gaaattaagaaaccaggttatatgcagaacttcctggtcatccaccagctcaggtgcaat
ggtgtgctggagggtatcagaatctgcagaaagggtttcccaagcagaatcctctatgct
gacttcaagcagagatacaaagtgctgaatgccagtgtcatccctgacggccagttcatt
gataacaagaaggcttctgagaagcttttgggatctattgatgttgatcacacgcaatac
atgtttggacacacaaaggtgttcttcaaagctggtctgctgggtgaccttgaggagatg
cgagatgaaaaactggcttccctggtcacaatgactcaggctctctgccgtgcatacctg
atgaggaaggagtttgtcaagatgatggaaaggagagaagcaatcttcaccatccagtac
aatatacggtcattcatgagtgtcaagacctggccatggatgaaggtttactacaagatc
aagcctctgctgcagagtgctgaaactgaaaaggaattggcaaacctgaaggaggagcat
ggaaaactcaaagaagtctatgccaaggtagaggccaggaagaaggagcttgaggagaag
atggtgtctctggtgcaagagagaaatgacctggcgctgcaagtggcatctggaaatgag
ggtctcaatgatgctgaggagaggtgtgagggtctcatcaaaagtaagatccagcttgag
gccaaactcaaagagacaaccgagagattggaggatgaagaggaaatcaatgctgagctg
actgccaagaagaggaaattggaggatgagtgctctgagctcaagaaggacattgatgat
ctggagctcaccttggccaaagtggagaaggagaaacatgccactgagaacaaggtcaag
aacctgacagaggagatggccgctcaggatgagtccattggtaagctgacaaaggagaag
aaagcactccaagaggcacaccagcagactcttgatgatcttcaggcagaggaagacaaa
gtcaacactctgactaaggccaagactaagcttgaacaacaagtggatgatcttgaaggt
tccctggagcaagaaaagaagctccgtatggatcttgagagaactaagagaaagcttgag
ggagacctgaaattgtcccaggagaacatcatggatctggagaatgacaagcagcagtct
gaggagaagctgaagaagaaggactttgaaacaagccaacttcttagcaagattgaggat
gaacaatccttgggtgctcagcttcagaagaagatcaaggagcttcaggcccgcattgag
gaactggaggaagagattgaggctgagcgtgcagctcgtgccaaggttgagaagcagaga
gctgatctctccagggaacttgaggagatcagtgagaggcttgaggaggctggtggtgcc
actgctgctcaaattgagatgaacaagaagcgtgaggctgagttccagaagctgcgtcgt
gaccttgaggagtccaccctgcagcatgaagccactgctgcagctctccgcaagaagcag
gcagacagtgtggctgagctgggagagcagattgacaacctccagcgtgtcaagcaaaag
cttgagaaggagaagagtgaattcaagatggagattgacgacctctccagcaatatggag
gctgttgctaagactaagtccaacctggagaagatgtgccgcacccttgaggaccaactg
ggtgaagtcaaggccaagagcgatgagagtgctcgccagaacaatgacctcagtgctcag
aaagcaagacttcagactgaaaatggagagcttggccgccaagtggaagagaaagaggct
cttgtatctcagctgaccaggagcaagcaagccttcactcagcaaattgaggagctgaag
agactgaatgaagaggaaatcaaggccaagaatgccctggcccatgctgttcagtctgca
cgccatgactgtgacctcctgagggagcagtttgaggaagagcaggaggctaaagctgaa
ctgcagcgtggcatgtccaaggccaacagcgaggttgcacagtggaggaccaagtacgaa
actgatgccatccagcgcactgaagagcttgaggagtccaagaaaaaacttgcccagcgt
ctgcaggaggctgaggagcaaattgaggctatcaactccaagtgtgcatctctggacaag
accaaacagagactccagggtgaggttgaggacctcatgattgatgtagaaagagccaac
gctctggctgccaatcttgacaagaagcagaggaactttgacaaggttctggcagagtgg
aagcagaagtacgaggagggtcaggctgagctggagggtgcccagaaagaggcccgttct
ctcagcactgagctgttcaagatgaagaactcctatgaggaggctcttgaccagttggaa
actctgaagagggaaaacaagaacctccaacaggagatctcggacctgactgagcagctg
ggtgagactggaaagagcattcatgagctggagaaggccaagaagacagttgagactgag
aaggctgagattcagactgcgcttgaagaggctgagggaactcttgagcatgaggagtcc
aagattcttcgtgtccagcttgagctgaaccaggtcaagggtgaggttgacaggaagctt
gcagagaaggatgaggagatggagcagatcaagaggaatagccagagggtgattgactcc
atgcagagcactctggatgctgaggtcaggagcaggaatgatgccctgagaatcaagaag
aaaatggagggagacctcaatgagatggaggttcagctaagtcatgctaaccgccaggct
gctgagtcccagaaacacctaaggaccattcagggtcagctcaaggatgcccagttgcac
cttgatgatgctgttcgaggacaggaagacatgcaggagcaggctgccatggtggagcgc
aggaacggcctgatggtggctgagattgaggagctcagggctgccctggagcagacagag
agaggccgcaaagtggctgaacaggagcttgttgatgccagtgagcgtgttggcctcttg
cactcccagaacacaagtctgattaacaccaagaagaagcttgaggctgacctggttcag
gtccagagtgaggttgatgacatcgtccaggaggctagaaatgctgaggacaaggccaag
aaagctatcactgatgctgccatgatggcagaggagttgaagaaagagcaggacaccagt
tcccatctggagaggatgaagaagaacctggaggtcactgtgaaggatctgcagcaccgc
ctggatgaggctgagaatctggccatgaagggtggcaagaaacaactccagaaactggag
tccagggttcgtgagctagagggtgaggtcgatgctgaacagagacgaggtgttgatgca
gtcaagggagtccgcaaatacgagaggagggtgaaggagctcacctaccagactgaagag
gacaagaagaacatcaacagactccaggatctggttgacaagctgcagctgaaggtcaag
gcctacaagagacagtccgaggaagctgaggagcaggccaacaaccacctgtccaagttc
aggaaggtgcagcatgagctggaggaggctgaggagcgtgctgacattgctgagtctcag
gtcaacaagctgagggccaagagccgtgatggtggcaagggcaaagaggctgctgagtaa
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integrated database retrieval system
