Alosa sapidissima (American shad): 121680934
Help
Entry
121680934 CDS
T11137
Name
(RefSeq) myosin heavy chain, fast skeletal muscle-like
KO
K24220
myosin heavy chain 1/2/3/4/8/13/7B/15
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121680934
04820 Cytoskeleton in muscle cells
121680934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121680934
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121680934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
Rod_CreS
CCDC39
FKBP15
CC_Liprin_beta
DUF848
IQ
NPHP3_N
CEP135_TSGA10_CC
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
121680934
NCBI-ProteinID:
XP_041916469
LinkDB
All DBs
Position
13:complement(17661419..17671832)
Genome browser
AA seq
1936 aa
AA seq
DB search
MGDGEMAQFGAAAIYLRKPEKERIEAQSKPFDAKTACYVVDKEDLYVKGTIKKREGGKVV
VETLETKEERTVKEDEVFPLNPPKYDKIEDMAMMTHLNEASVLYNLKERYAAWMIYTYSG
LFCVTVNPYKWLPVYDQAVVNAYRGKKRVEAPPHIFSVSDNAFQFMLQDRENQSVLITGE
SGAGKTVNTKRVIQYFATIAVSSGKKSEPPASSGKIKGSLEDQIIAANPLLEAYGNAKTV
RNDNSSRFGKFIRIHFGTSGKLASADIETYLLEKSRVTFQLPDERGYHIFFQMMTNHKPE
IIEMSLITANPYDFPMCSQGQITVASIDDKEELDATDDAIDILGFSNEEKVTIYKLTGAV
LHHGNMKFKQKQREEQAEPDGTEDADKVAYLLGLNSADMLKALCYPRVKVGNEFVTKGQT
VPQVNNAVSALSKSIYERMFLWMVIRINQMLDTKQPRQFFIGVLDIAGFEIFDFNSMEQL
CINFTNEKLQQFFNHHMFVLEQEEYKKEGIVWEFIDFGMDLAACIELIEKPMGIFAILEE
ECMFPKASDTTFKNKLYDQHLGKTKAFEKPKPAKGKAEAHFSLVHYAGTVDYNVAGWLEK
NKDPLNDSVVQLYQKSGVKLLPVLYPPVVEESGGGGKKKKKGGSMQTVSSQFRENLGKLM
TNLRSTHPHFVRCLIPNEIKKPGLMQNFLVIHQLRCNGVLEGIRICRKGFPSRILYGDFK
QRYKVLNASVIPDGQFIDNKKAAEKLLGSIDVDHTQYMFGHTKVFFKAGLLGTLEEMRDE
KLATLVTMTQALCRAYLMRREFVKMMERREAIFTIQYNIRSFMNVKTWPWMKVYYKIKPL
LKSAETEKELANLKEEHDKLKDVHAKVEAKKKELEEKMVALVQERNDLALQVASGNEGLN
DAEERCEGLIKSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLEL
TLAKVEKEKHATENKVKNLTEEMASQDESIAKLTKEKKALQEAHQQTLDDLQAEEDKVNT
LTKSKTKLEQQVDDLEGSLEQEKKLRMDLERTKRKLEGDLKLAQENIMDLENDKQQSEEK
LKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADL
SRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQADS
VAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLASNMEAVAKAKGNLEKMCRTLEDQLSET
KAKSDEAARQVNDLSAQRARLQTENGELGRQVEEKDALVSQLTRSKQAFTQQIEELKRLN
EEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDA
IQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLDKTKQRLQGEVEDLMIDVERANGVA
ANLDKKQRNFDKVLAEWKQKYEESQAELEGAQKEARTLSTEMFKLKNSYEESLDHLETLK
RENKNLQQEISDLTEQLGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKIL
RVQLELNQVKGEVDRKLAEKDEEMEQIKRNSQRVIDSMQSTLDSEVRSRNDALRIKKKME
GDLNEMEIQLSHANRQAAESQKQLRNVQGQLKDAQLHLDDAVRGQEDMKEQVAMVERRNG
LMVAEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSLINTKKKLEADLVQVQS
EVDDIVQEARNAEDKAKKAITDAAMMAEELKKEQDTSSHLERMKKNLEVTVKDLQHRLDE
AENLAMKGGKKQLQKLESRVRELEGEVENEQRRGVDAVKGVRKYERRVKELTYQTEEDKK
NVTRLQDLVDKLQLKVKAYKRQAEEAEEQANGYLSKFRKVQHELEEAEERADIAESQVNK
MRAKSRDSGKGKEAAE
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggtgaaatggctcagtttggcgcagctgccatttaccttcgtaagcctgag
aaggagagaattgaggcccaatccaagccctttgatgcaaagactgcttgctatgtggtt
gacaaagaggacttgtacgtcaagggtacaataaaaaagagggaaggaggcaaagttgtt
gttgaaacgcttgaaaccaaggaggaaaggacagtgaaggaagatgaagtcttccccttg
aatcctcccaaatatgacaaaattgaggacatggccatgatgacccacctcaacgaagcc
tccgtcctgtataacctcaaagagcgttatgcagcatggatgatctacacctactcagga
cttttctgtgtcactgtgaacccctacaagtggctccccgtatacgatcaagcagtggtg
aatgcctacagaggcaagaagcgtgtggaggctccgcctcacatcttctctgtctctgac
aacgcatttcaattcatgcttcaagacagggagaatcagtctgtcctgatcaccggagaa
tctggtgctggcaagactgtaaacaccaagcgtgtcatccagtactttgcaacaattgca
gtgtctagtggcaagaagtcagagccaccagccagcagtggaaaaattaagggctctctt
gaagaccagattattgctgccaacccactgctggaggcttatggtaatgccaagactgtg
cggaatgacaactcttcccgtttcggaaaattcatcagaattcactttgggacttctgga
aaactggctagtgctgatattgagacttacctgttggagaagtctagagtgacattccag
cttcctgatgagagaggctaccacatcttcttccagatgatgaccaaccacaagcctgaa
attatagaaatgtccctcatcactgccaacccctatgacttcccaatgtgcagtcagggt
cagatcactgtggccagcattgatgacaaagaggagttggatgccacagatgatgcaatt
gacatcctgggtttcagtaatgaggagaaagtcaccatttacaagctgactggtgctgtg
ctccatcatggcaacatgaaattcaagcagaagcagcgtgaggagcaggctgagcctgat
ggcactgaggatgctgacaaagtcgcttacctcctgggcctgaactctgctgacatgctg
aaggctctgtgctacccaagagtgaaagtcggaaatgagtttgtcaccaagggtcagact
gtaccacaggtcaataacgcagtgtcggccttgtccaagtccatctatgagaggatgttc
ttgtggatggtcatccgtatcaaccagatgttggacactaaacagccaaggcagttcttt
atcggtgtgctggatattgctggctttgagattttcgatttcaacagcatggagcagctg
tgtatcaacttcaccaatgagaaactacaacagttcttcaaccatcacatgttcgttctg
gagcaagaggagtacaagaaagagggcattgtttgggagttcattgactttggcatggac
ttggccgcttgcattgagctcatagaaaagcctatgggtatctttgccatccttgaagag
gagtgcatgttccccaaggcctctgacaccactttcaagaacaagctgtatgatcagcat
cttggcaagactaaggcctttgagaagcccaagcctgctaaaggcaaggctgaggcccac
ttctccctggtgcactatgcaggcactgtggactacaatgttgctgggtggctggagaag
aacaaggatccactgaacgattctgttgtgcagttgtaccagaaatcgggagtaaaactc
ctgcctgtcttgtacccacctgttgttgaggagtctggtggtggtggtaagaagaagaag
aagggtggctccatgcagactgtgtcatcacagttcagggagaacttgggcaaactgatg
accaacttgaggagcacccatcctcactttgtgcgttgtctgattccaaatgaaattaag
aaaccaggtctcatgcagaacttcctggtcatccaccagctcaggtgcaatggtgtactt
gagggtatcagaatctgcagaaagggtttcccaagcagaatcctatatggtgacttcaag
cagagatacaaagtgctgaatgccagtgtgatccctgatggtcaattcattgataacaag
aaggctgctgagaagctcttgggatcaattgatgttgatcacacccagtacatgtttgga
cacacaaaggtgttcttcaaagctggtttgctgggtacccttgaggagatgcgagatgag
aaactggctaccctggtcacaatgactcaggctctctgtcgcgcatacctgatgaggagg
gagtttgtcaagatgatggaaaggagggaggctattttcaccatccagtacaatatacgc
tcattcatgaatgtcaagacctggccatggatgaaggtttactacaagatcaagccccta
ctgaagagtgctgaaactgaaaaagagctggccaacctgaaggaggagcatgacaaactt
aaagatgtccatgcaaaggttgaggccaagaagaaggaactcgaggagaagatggtggct
ctggtgcaagagaggaatgacctggcactgcaagtggcatctggaaatgagggtctcaat
gatgctgaggagaggtgtgagggtcttatcaaaagtaagatccagctcgaggccaagctc
aaagagacaaccgagagattggaggatgaagaggaaatcaatgctgagctgactgccaag
aagaggaaactggaggatgagtgctctgagctcaagaaggacattgatgatctggagctg
accttggccaaagtggagaaggagaaacatgctaccgagaacaaggtaaagaacctaact
gaagagatggcctcccaggatgagtccattgctaagctaacaaaggagaagaaagcccta
caagaggcccatcagcagactcttgatgatcttcaggcagaggaagacaaagtcaacact
ctgaccaaatccaagactaagcttgaacagcaagtggatgatcttgagggttccctggag
caagaaaagaaactccgtatggatcttgagagaactaaaagaaagcttgagggtgacctg
aagctggcccaggagaacatcatggatctggagaacgacaagcaacagtctgaggagaag
ctgaagaagaaggactttgaaacaagccaacttcttagcaagattgaggatgaacaatca
ctgggtgctcagctgcagaagaagatcaaggagcttcaggcccgcattgaggaactagag
gaagagattgaggctgagcgtgcagctcgtgccaaggttgagaagcagagagctgatctc
tccagggaacttgaggagatcagtgagaggcttgaggaggctggtggtgccactgctgct
caaattgagatgaacaagaagcgtgaggctgagttccagaagctgcgtcgtgaccttgag
gagtccaccctgcagcatgaagccactgctgcagctctccgcaagaagcaggccgacagt
gtggctgagctgggagagcagattgacaacctccaacgtgtcaagcagaagcttgagaag
gaaaagagtgaattcaagatggaaattgatgatcttgccagcaacatggaggctgttgct
aaagctaagggaaatctggagaagatgtgccgcacccttgaggaccaactcagtgaaacc
aaggccaagagtgatgaggctgcccgtcaggtcaatgacctcagtgctcagagagcaaga
cttcagactgaaaatggtgagcttggccgccaggttgaggagaaagacgctcttgtgtct
cagctgaccaggagcaaacaggccttcactcagcaaattgaggagctgaagagactgaat
gaagaggaggtcaaggccaagaatgccctggcccatgctgttcagtctgcacgccatgac
tgtgacctcctgagggagcagtttgaggaagagcaggaggctaaagctgaactgcagcgt
ggcatgtccaaggccaatagcgaggttgctcagtggaggaccaagtatgaaactgatgcc
atccagcgtactgaggagcttgaggagtccaaaaaaaagcttgcccagcgtctgcaggag
gctgaggagcaaatcgaggctgtcaactccaagtgtgcctctctggataagaccaagcag
agactccagggtgaagttgaggacctcatgattgatgtggagagagccaatggtgtagct
gccaaccttgacaagaagcaaagaaactttgacaaggtcctggcagaatggaagcagaag
tacgaggagagtcaggcagagttggagggtgcccagaaagaggctcgtactctcagcact
gagatgttcaagttgaagaactcctatgaggagtctcttgaccacctggagaccctgaag
agggagaacaagaatttgcaacaggagatctcagacctgactgagcagcttggtgagact
ggaaagagcatccatgagctggagaaggccaagaagactgtagaaactgaaaaggctgag
atccagacagccctggaggaggctgagggaactctcgagcatgaggagtccaagattctt
cgtgtccaactggaactcaaccaggtcaagggtgaggttgacaggaaacttgcagaaaag
gatgaggagatggagcagatcaagaggaacagccagagggtgattgactccatgcagagc
actctggactctgaggtcaggagcaggaatgatgccctgagaatcaagaagaagatggag
ggagacctcaatgagatggaaattcagctgagtcatgctaaccgccaggctgctgagtcc
cagaaacaactgagaaatgtacaaggtcaactcaaggatgcccaactgcaccttgatgat
gctgtcagaggacaagaagacatgaaggagcaggttgccatggtggagcgcaggaacggc
ctgatggtggctgagattgaggagctcagagctgccctggagcagacagagagaggccgc
aaagtggctgaacaggagctggttgatgccagtgagcgtgttggccttctgcactctcag
aacacaagtctgattaacaccaagaagaagcttgaggctgacctggttcaggtccaaagt
gaggttgatgacatcgtccaggaggctagaaatgctgaggataaggccaagaaagctatc
actgatgctgccatgatggcagaggagctgaagaaggagcaggacaccagttctcatctg
gagaggatgaagaagaacctggaggtcactgtgaaggatctgcagcaccgcctggatgag
gctgagaatctggccatgaagggtggcaagaaacaactccagaaactggagtccagggtc
cgtgagctggaaggtgaggttgagaatgaacaacgacgtggtgtcgatgctgtcaaggga
gtccgcaaatacgagaggagggtgaaggaactcacctaccagactgaggaggacaagaag
aatgtcaccagactgcaggacctggttgacaagctgcagctgaaggtcaaagcctacaag
aggcaggctgaggaagctgaggagcaagccaacggctacctgtccaagttcaggaaggtt
cagcatgagctagaggaggctgaggagcgtgctgacattgctgaatcccaggtgaacaag
atgagagcaaagagccgtgattctggaaagggcaaggaggctgcagagtaa
DBGET
integrated database retrieval system
