Alosa sapidissima (American shad): 121680977
Help
Entry
121680977 CDS
T11137
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121680977
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121680977
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121680977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
PHD_2
zf-C3HC4
Rad60-SLD
Prok-RING_4
zf-RING_2
zf-RING_5
TPR_TNPO3_IPO13_3rd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121680977
NCBI-ProteinID:
XP_041916509
LinkDB
All DBs
Position
13:complement(2751383..2910639)
Genome browser
AA seq
887 aa
AA seq
DB search
MWIQIRTIDGKETRTIEDLSRLTKIESLRLKIREIFDVNPEQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQTDAPDSPTLKECEDMASTPCPSTVTPIVIPTSPSAVATVNNNSS
NNSSSNSQKKSESEKFCGGPVDNQPSTSSKSFLIDPGIGVYKINELVDCRDISIGAWFEA
TIENVTHASSGLNSKASVASTAKSGKASTRTNGKLEAAQTTVSLDNNCNSMINSDISEPS
TSQSECRLIQDELIYHIKYEDYPENGIVEMSPEDVRPRARTLLRFDQLTVGQVVMVNYNI
EIPEERGFWYDGEITALTERSRTNKEVRVKILLGGPGDIIGDCRVVFLDEIYEIERTGAP
ALSPLDGKFKRKSGPECKHCKADPDVECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYCL
NPPLSTIPEDEDWYCPTCKNDTNEVVKAGEKLKASKKKAKMPSANTGSQRDWGKGMACVG
RTKECTIVPSNHYGPIPGIPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAGG
FEDEVDRGDEFTYTGSGGRDLSGNKRIGEHCFDQTLTHMNRALALNCDAPLNDKDGAESR
NWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDDQ
EPAPWTPEGAERIKKLGLKVQYPPGYLEAMANKTKKEASVRGGMRGKRHPGRGRPKNTPP
PKKPKEEKEDEDIEIPAVISAGGYQSNGSQKTPKGKDMCSNSATQPPKEKGVEAFQLTEE
QQNLIQEDQPNKKLWDEVMEFLIEGPSFLKKVEQIFMCVCCQELAYQPITTTCLHNVCKS
CLQRSFRAEVYSCPACRHDLGKDYVMILNKTLQQLLDQFFPGYSKGR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaaattcggacaatagatggaaaggaaaccagaaccatagaagatctatcc
agactcacaaaaatagagtctttgagactgaaaattcgggagattttcgatgttaacccg
gagcagcagcgcttattctacagagggaaacagatggaggatggccagacgctgtttgac
tacaatgtgggtcttaatgacattgttcagctcctaattcgctcccagactgatgctcca
gacagtcctacccttaaggaatgtgaggatatggccagcactccttgtccatccacagtc
acacctattgtaattccaacttctccttcggctgtagccacagtcaacaacaacagcagc
aacaacagcagtagtaacagtcagaagaagtctgagtcagagaagttttgcggtggtccg
gtggacaaccagccatccacatccagcaaatccttcctgatcgaccctgggattggggtg
tacaagataaacgagttggtggactgcagagacatcagcatcggtgcttggtttgaggcg
accattgagaatgtcacacatgcctcttctggactgaatagcaaggccagtgtggcctca
acagctaaaagtggcaaagccagtacaaggactaatggcaaattggaggcagcacagacc
acagtcagcttggacaataactgcaactctatgataaactcggacattagtgagccctca
acctctcagtcggaatgcagactcatccaggatgagctcatctaccatatcaaatatgag
gattacccagagaatggcatagtagagatgtcaccagaggatgtgcgtccgcgggctcgg
accctactccgttttgaccagctcacggttggacaggtggtcatggtgaattacaacatt
gaaatcccggaagagcggggcttttggtatgatggagagataacagccctcaccgaaaga
tcgaggacaaataaagaggtcagagtgaagattcttctcgggggcccgggtgatattatt
ggagactgcagggttgtcttccttgatgagatctatgagattgagaggacaggagctccc
gcgctctctccattggatggaaagttcaaacgtaaaagtgggcctgagtgtaagcactgt
aaggcggatccggatgtggagtgtcgcttctgttcatgttgtgtatgtgggggcaagcag
gatgctcacatgcagttgctgtgtgatgagtgcaatatggccttccatatctactgcctc
aacccaccactctccaccatccctgaagatgaagactggtactgccccacatgcaagaat
gacacaaatgaggttgtgaaagctggggagaagctcaaggctagcaagaagaaggcaaag
atgccctctgccaacactgggagccagagagactgggggaagggtatggcatgtgtggga
cgtactaaggagtgtacaatagtgccttctaaccactatggtcccattcctggcattcct
gtgggaacaacatggaaattccgtgtgcaggtgagtgaggctggtgtgcacaggccacat
gttggtggtatccatggacggagtaatgatggttcctattcactggttctcgctggaggc
tttgaggacgaagtggacaggggtgatgagtttacttacacgggtagtgggggtcgggac
ctttctggaaacaagcgaattggcgagcattgttttgaccaaacacttacacacatgaac
agggcccttgcactgaactgtgatgcaccattaaatgataaagatggtgcagagtctcgt
aactggcgtgcaggaaagcctgtccgggtagtgcgtagctccaaaggccgacgaatcagc
aagtatgcccctgaggaaggaaatcgttatgatggtatctacaaggtggtgaagtactgg
cccgagattgggaagtgtgggtttctggtgtggcgatatctgttacggcgcgatgaccaa
gaaccagcaccgtggactcctgaaggtgcagaacgtatcaagaagctgggcctcaaagtg
cagtatcccccaggctatttggaagccatggctaacaagactaagaaggaggctagtgtg
agagggggcatgcgaggcaaaagacaccctgggagaggccgaccaaaaaatacaccccct
ccaaaaaagccaaaagaagaaaaggaggatgaagacatcgaaataccagctgtaatttca
gctggtgggtatcaaagcaatggtagtcagaaaacacccaagggcaaagatatgtgttca
aacagtgctactcagcccccaaaggagaaaggggtggaggccttccagctgactgaggag
cagcaaaacctgatccaagaggaccagcccaataagaagttatgggatgaagtaatggag
ttcctcatcgaagggccaagctttctgaaaaaggtggagcagatcttcatgtgtgtgtgc
tgccaggagcttgcctaccagcccatcactactacatgtctgcacaatgtttgtaagagc
tgtcttcaaaggtcattccgtgctgaggtgtatagctgccctgcttgtcgccatgacctg
ggaaaggattatgttatgatacttaacaagacactacagcagcttcttgatcagttcttc
cctggatacagcaagggccgatga
DBGET
integrated database retrieval system
