Alosa sapidissima (American shad): 121681259
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Entry
121681259 CDS
T11137
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121681259 (usp8)
04137 Mitophagy - animal
121681259 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121681259 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121681259 (usp8)
04121 Ubiquitin system [BR:
asad04121
]
121681259 (usp8)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121681259 (usp8)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121681259 (usp8)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
Others
121681259 (usp8)
Ubiquitin system [BR:
asad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121681259 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
CDC45
Motif
Other DBs
NCBI-GeneID:
121681259
NCBI-ProteinID:
XP_041916828
LinkDB
All DBs
Position
14:30612877..30625026
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AA seq
1061 aa
AA seq
DB search
MPAVSTGAKELYLSTSLGELNKKAEFKPEKASTRHYVQSACKMFKAAEECRLDRDEEKAY
VLYMRYLTVYDVIKKRPDFKQQQDYYLSMLGPSSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEREKQEEKRRKEEKQEKDEGRSLSKGTTDSRKDNKKVKGEQNDSKIVPSKAAVPVGG
ITAEKLFHMMMDHSLSVIVMDARSLRDFEESQIQVPAQKCISVPEEAISPGITVNQIEVK
LPEASKELWKRRGFVDYVVLLDWFSSAADLKLGTTLQSLKDALYKWDSTTILRSEPMVLE
GGYENWLFFYPMYTTNAKVKPPRQQASSAIPQLNFSYPSLEEPKPPAAPEPQQPVQVNGR
AADEALPLEPAAPEPSTVAPAVPDGPVPKVTETTKKVPLPQTGVTVKPTPQVDRSKKPSV
RISDGSRPNNEPPTKDSQLPQNGPFVPDRSVKPAFESGGQLSEEERIQIHAEAAGVKDKA
RWELEQRRRAQEEEEAREEEERRRRQEQEEGERKTPEEEEEEEEEEKGRQERGRLERQRA
EEDDQVGQERFRRGQRTQKGEGQLKSVSLDSPMPNNVVSEIKREPLTRARSEEMGRTVPG
LPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVSVPQTPPATPKQKPAKPPEAERDREQS
KLKRSYSSPDITQDLQEEGQKKPTPTPTINRETKPITASTYAKVENSRPSAAKIRSLNPT
FGGLGPALTGLRNLGNTCYMNSILQCLCNTPIMADYFNKNRYQDDINRANILGHKGEVAE
EFGVIMKALWSGQYKCITPRDFKVTIGKINEQFSGYEQQDSQELLLFLMDGLHEDLNRAD
NRKRYKEEANDHLDDIKAAELAWSKHKLLNSSIIVSLFQGQFKSTVQCLTCHRKSRTFEA
FMYLSLPLASSNKCSLQDCLKLFSKEERLTDANKVFCRHCKAHRDSTKKLEIWKVPPILL
VHLKRFSYEGRWKQKLQTTVDFPLESLDLAQYVIGPKPSQKGYNLFGVSNHYGGLDGGHY
TAYCRNNPKQRWCKFDDHEVSEMSTSSIRSSAAYILFYSSL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgtttcaacaggggcgaaagagctctacctgtcaacgtctctgggtgaattg
aacaagaaagcagaatttaagccggagaaagccagcacaagacactatgttcagagtgcc
tgtaagatgttcaaagctgccgaggagtgtcgccttgacagagatgaagaaaaggcctat
gttctgtacatgagatacctgaccgtttatgatgtcattaagaagagacccgacttcaaa
cagcagcaggattattacttgtcaatgcttgggccatccagcttcaaaaaagccattgag
gaagcagagaagttatcagagagtctaaaactccggtatgaagaagttgaagtacgtaaa
aaacttgaggagagggagaaacaagaagagaaacgacgcaaagaggaaaagcaggaaaag
gacgagggacggtctttatcaaaagggacaactgactcccgcaaagacaataagaaggtg
aaaggagaacagaatgactcaaaaattgtaccatcaaaagctgctgtgccagtgggaggg
atcacagctgagaaactcttccacatgatgatggaccacagcctcagtgtcatcgttatg
gatgcgagaagcctcagggacttcgaagagtcgcaaattcaagtgccggcacagaagtgc
atcagtgtcccagaggaggccatctccccagggataactgtaaaccagatcgaggtgaag
cttccagaggcctcaaaagagttgtggaagcgtagaggttttgtggattatgtggttctg
ctagactggttcagctctgcggcagacctcaagctggggaccacactgcagagtttgaaa
gatgccctttacaagtgggacagcaccaccatcctccgcagtgagcccatggtgttggag
ggaggctatgagaactggctgttcttctaccccatgtacaccaccaatgctaaagttaag
cccccaagacagcaggcctccagtgccatcccacaactgaacttcagctacccctcgctg
gaggagcccaagcccccggcggcccccgagccccagcagccagtgcaggtgaatgggaga
gcggcggacgaggccctcccactggagccagcagcgccagagccctcaaccgtggctccc
gctgtccccgacggacctgttcctaaagtgaccgagacgaccaagaaagttcctctgcct
cagactggcgtaacagttaaaccgacccctcaggttgatcgcagtaaaaagccctctgtc
agaatctcggatggctcaagacccaacaacgaaccaccgactaaggactctcagctgcct
cagaatggcccgtttgtgccggaccgctcagtgaagccggccttcgagtccggcggccag
ctgtcggaggaggagcgcatccagatccacgccgaggcggcgggtgtgaaggacaaggcc
cgctgggagcttgagcagcgcaggagagcccaggaggaggaggaggcacgcgaggaggag
gagcggcggaggaggcaggagcaggaggaaggggagaggaagacacccgaggaagaggag
gaggaggaggaggaggagaagggccgacaggagcgcggccggctggagcggcagagagcc
gaggaggacgatcaggtgggacaggagaggttcagacgagggcagagaacgcagaaggga
gaagggcagctgaaaagtgtctcgctggactcgcccatgcccaacaacgtggtcagtgag
atcaagcgggagcccttaaccagagcacgcagtgaggagatgggacgcactgttccaggc
ctgccagtcgggtggatgaagtttctagacacagtgacgggtacgtaccggtattaccac
tccccgaccaaccgggtgcacttgtaccccccggaggtgagcgtgccccagacgcccccg
gccacgccgaagcagaagccggccaagccccccgaggcggagcgggaccgcgagcagtcc
aaactcaagcgctcctactcatcccctgacatcacccaggacctgcaggaggaaggccag
aagaagcccaccccaacacccaccatcaacagagagaccaagcctataactgctagcaca
tatgcgaaggttgaaaattccagaccgtcagcagccaagatccgtagtctgaaccccaca
tttggaggtctgggaccagccctgactggtctgaggaacctggggaacacctgctacatg
aactcaatcctacagtgtctgtgtaacacacccatcatggctgactacttcaacaagaac
cgctatcaggatgacattaaccgagccaacatcctgggtcacaagggcgaggtagcggag
gagtttggcgtgatcatgaaggctctctggtctggccagtacaagtgcatcactccacgc
gacttcaaggtcaccattggcaagatcaacgagcagttctctggctacgagcagcaggac
tcccaggagctgctgctctttctcatggacggcctccacgaggacctcaacagagcagac
aaccgcaagcgctacaaggaggaggccaacgaccacctggacgatatcaaggcagccgag
ctggcctggagcaagcacaagcttctcaactcctccatcatcgtgtcgctcttccagggc
cagttcaagtccaccgtccagtgcctgacctgccaccgcaagtcccgcacctttgaggcc
ttcatgtacctctccctgcccctggcctcctccaacaagtgctctctgcaggattgcctg
aagctgttctccaaggaggagaggctgactgacgcaaacaaagtgttctgcagacactgt
aaagcccatagagattctactaagaagttggagatctggaaggttccacccatcctcctg
gtgcacttgaaaaggttctcatatgagggcagatggaagcagaagctgcagaccacagtg
gactttcccctcgagagtctggacctggcgcagtacgtcatcggccccaagcccagccag
aagggatacaacctgtttggcgtgtctaaccactatggtgggctggacggcggccactac
acggcctactgcaggaacaaccccaaacagcgctggtgcaagttcgacgaccacgaggtg
tcggagatgtccacctcctccatcaggtcctcggccgcctacatcctcttctactcctcc
ctgtga
DBGET
integrated database retrieval system
