Alosa sapidissima (American shad): 121681316
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Entry
121681316 CDS
T11137
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121681316 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121681316 (vps35)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121681316 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
121681316
NCBI-ProteinID:
XP_041916915
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Position
14:28682287..28701575
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSI
DFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYKQ
IVLSGVLEQVVNCRDPLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKH
FPPLFEYFDYESRKTMSCYVLSNILDYNTTILAQEQVDSILSLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLA
FRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTRCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSSRNTDKSGEEIRDGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQ
RESPESEGPAYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccacacagcagtcacctcaggatgagcaggagaagctgttggatgaggctgtg
caggccgttaaagtgcagtcctttcagatgaagcgctgcctggacaaaaacaagttgatg
gatgcactgaagcacgcctccaatatgctgggtgaactaaggacttccatgctctctcct
aaaagctactatgagctctacatggccatctctgatgagctgcactacctggaggtttac
ctgactgatgagtttgccaaaggcaggaaagtggctgatctgtatgagttggtccagtat
gcaggaaacatcattcccagattgtatctgctaatcactgtaggggtggtgtacgtgcgc
tccttcccccagtcccgtaaagacatcctgaaggacttagtggagatgtgccgtggagtg
cagcatcctctacgcggcctgtttctcaggaattacctgctgcagtgcacccgtaacatc
ctgcccgatgatggggagcaagccgaggaggagatgactggggacatcaatgattccatt
gattttgtgctgctgaacttcgctgagatgaacaagttgtgggtgcgcatgcagcaccag
ggccacagtcgtgaccgggagaagagggagaaggagaggcaggagctgcgcatcctggtt
gggaccaaccttgtccgtctgagccagctggagggggtcaacgtggacaaatataaacag
attgtgctgtctggagtcttggagcaggtagtgaattgcagggaccctctggcacaggag
tacctcatggagtgcattatacaggtgttcccagatgaattccacctccaaacactgaac
cccttcttgcgctcatgtgccgagctgcatcagaacgtcaatgtgaaaaacatcatcatt
gctctcattgacagactggctctgttcgcccacagggaagacggccctggcattccagct
gaaatcaagctctttgacattttctctcagcaagtagcaactgtgattcagtcacgccag
gacatgccctcggaggacgtagtctcactgcaggtgtccctcatcaacctggccatgaag
tgctaccctgaccgtgtagattacgtagacaaggtgctggagagcactgtcgagatcttc
aacaaacttaatctggaacacattgccaccagcagcgcggtctctaaagagctgacgcga
ctgctgaagatcccggtggacacctacaacaacatcctgaccgtgctgcagctcaagcac
ttcccgccactttttgagtacttcgactacgagtcgcgcaagaccatgagctgctatgtg
ctcagcaacatcctggactacaacaccactattttggctcaggagcaggtggactccatc
ctgagcctggtgtccacactgatccaggaccagccagatcagccagcagaggaccctgat
cctgaggactttgctgaagagcagagccttgtgggcaggttcatccacctgctccattct
gatgaccctgaccaacagtacttgatcttgaacactgccagaaagcattttggtgctggt
ggcaaccaaaggatccgttacacgcttcccccactggtgtttgctgcatatcaactggcc
tttcgctacaaagagaactcctcttcggatgacaaatgggagaagaagtgtcagaagatt
ttctcctttgcacaccagaccatcagtgctcttatcaaagctgaactggcggagttgccc
ctccgcctcttcctgcagggggcgctagcggccggggagatcggctttgagaaccacgag
actgtggcctacgagtttatgtcccaggccttttccctgtacgaggacgagatcagcgac
tccaaagcccagctggcggccatcactttgatcattggcacatttgagcgcacgcgctgc
ttcagcgaggagaaccatgagccactgcggacccagtgtgcgctggctgcctctaagctg
ctgaagaagcctgaccagtgccgtgccgtcagcatctgcgcacatctgttttggtccagc
cgcaacaccgacaagagcggagaggagattcgagatggcaagagggtgatggagtgtctg
aagaaagctcttaagattgccaatcagtgcatggacccatccttgcaagtgcagctcttc
atcgagatcctgaacagatacgtctgcttctacgagcgagagaacgatgcggtgacggtg
caggttctgaaccagctgatccagaagatccgcgaagatttgccaaacctggaggccagc
gaagagacggagcagatcaacaaacacttccacaacacactggagcacctgcgcctgcag
agggagtctcccgagtcggaggggcctgcctacgagggcctggtgctgtag
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