Alosa sapidissima (American shad): 121681583
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Entry
121681583 CDS
T11137
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04217
Necroptosis
asad04622
RIG-I-like receptor signaling pathway
asad04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121681583 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121681583 (cylda)
04625 C-type lectin receptor signaling pathway
121681583 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121681583 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121681583 (cylda)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121681583 (cylda)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C67
121681583 (cylda)
Ubiquitin system [BR:
asad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121681583 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
121681583
NCBI-ProteinID:
XP_041917323
LinkDB
All DBs
Position
14:6673437..6698808
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AA seq
982 aa
AA seq
DB search
MSSALWSQEKPGGGSGGGCFREDWRFYMVVTECVVEKPPQKTLRIPRGSLGQACQERNSL
GRTLPPAKGKRSLRLLDQANVVLSLDERDVAELDEKLAELLFPITNCEERYSLLCNEPRL
ERARQIDCGSKVRVQLRSGDDPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEG
SYQGQQLFRCEDECGVFVAVDKLELWEDEDDELGELEVDSVTLVDSEHDFPPLEINSRVL
VQTREGPERGTIIFYDLLPGNESLGFYVGVDMDNPIGDWDGVFDGKLLCSFASLEHTRLV
PVCDVMPEYSMQDQRPPKHSFASRGSSSDKSSGQSKPKSKGLGLQCGSRSKSEFYYTLNG
SSIDHPAQSKSKSTWYIDEASCSCLLGEDPAKSLTDTPPDFNQASPPSRAVPPSTSLTSD
QKFHSLPFSLSRKSGPNGSMSQGPLSLSVQSVRADQPDLQQGQQQQGQQPPPPQPTATAV
SPRQPSSPPPRGHLRLEVGSLVEVKENPPLCGVIRWVGLPPGLEEHLAGLELEEECVGCT
DGTFKGTRYFTCPPKKALFVKLKCCRPDSRFPSLHHSANPIERCNSIAFGGYLSEVVHEN
TPPRTENDGLEVMVGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRAKTDVEYYK
ETQELLRTEIVNPLRIHGYVCATKIMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHIL
RVDPLLKLRSAGQKVQDCYFYQIFMDKKDKVLVPTSQQLLEWSFINSDLKFAEAPSCLII
QMPRFGKDFKMFNKIFPSLELDITDLLEDTPRECRICGGLALYECRDCYEDGDITAGKIK
QFCEKCNTQVHLHPRRKSHRHGKLSVPKELQESVWRQGSFPHQRMELFAVLCIETSHYVA
FVKYGAADSAWLFFDSMADRDGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKNIQGY
ARRLLCDAYMCMYQSPTMSLYK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggccctgtggagccaggagaagcccgggggcggcagcggcgggggctgcttc
cgggaggactggcgcttctacatggtggtgacggagtgcgtggtggagaagccgccgcag
aagacgctgcgcatcccccgcggcagcctgggccaggcctgccaggagcgcaacagcctg
ggccgcacgctgccgccggccaagggcaagcggagcctgcggctgctggaccaggccaac
gtggtgctgagcctggacgagcgtgacgtggccgagctggacgagaagctggccgagctg
ctcttccccatcaccaactgcgaggagcgctacagcctgctgtgcaacgagccgcggctg
gagcgcgcccgtcagatcgactgtggctccaaggtgcgcgtgcagctgcgttcaggcgat
gaccctctgcccggcgtggtgcgcttcaaggggtcactgctcccggaccgggccctctcc
ggcatctggttcggtgttgagctactggaggagggccgaggccagggcttcacggagggc
tcgtaccagggccagcagctgttccgctgcgaggacgagtgtggcgtgttcgtggccgtg
gacaagctggagctgtgggaggacgaggacgacgagctgggcgagctggaggtggactcg
gtcacgctggtcgacagcgagcacgacttcccgccgctggagatcaactcgcgcgtgctg
gtgcagacccgcgaggggcccgagcgcggcaccatcatcttctatgacctgttgcccggc
aacgagagcctgggcttctacgtaggggtggacatggacaatcccattggggactgggac
ggcgtttttgacgggaagctgctgtgtagctttgccagcctcgagcacacccgcctcgtg
cccgtctgtgacgtgatgccagagtactccatgcaggaccagaggccccccaagcacagc
tttgcctctagaggcagcagcagtgacaagtcctctggccagagcaaaccaaagagcaaa
ggattaggtcttcagtgtgggagtaggagcaagtctgagttttattacactttaaatggc
agttctattgatcacccagcccagtccaaatccaaaagcacatggtacattgatgaagcg
tcatgcagctgtctgctgggagaggaccctgccaagtccctcacggacactccccccgac
ttcaatcaggcgtctccgccgtcccgcgccgtcccgccctccacctcgctgaccagcgac
cagaagttccactcgctgcccttcagcctgagccgcaagagcggccccaacggcagcatg
agccagggccctctctcgctgtccgtgcagtcggtcagggccgaccagcccgacctgcag
cagggccagcagcagcagggccagcagccgccgccgccgcagcccacggcaaccgccgtc
tcccccagacagccgtcgtcgccgccgccgcgggggcacctgcgcctggaggtgggctcg
ctggtggaggtgaaggagaatccaccgctctgcggagtcatccgttgggtggggctgccc
ccggggctggaggagcacctggcaggcctggagctggaggaggagtgtgtgggctgcacg
gacggcacgttcaagggcacccgctacttcacctgcccgcccaagaaggccctgttcgtc
aagctcaagtgctgtcggcccgactcacgcttcccctcgctgcaccactccgccaacccc
atcgaacgctgcaactccatcgcctttggagggtacctgagcgaggtggtgcatgagaac
acccctccgcgcacagagaacgacgggctggaggtgatggtgggcaagaagaaaggcatc
caaggccactacaactcctgctacctggactccaccctcttctgtctgttttctttcagc
tctgttttggatacagtactgctgaggcctcgggccaaaactgatgttgagtattacaag
gagacacaggagctgctgcgcacagagatcgtcaacccgctacgcatacacggctatgtg
tgtgcaactaaaataatgaagctaagaagaatcctggagaaggtggaggctgcctctggc
ttcacctcggaagagaaagatcctgaggaattcctgaacatcctgttccatcacatcctg
agagtagaccctttgctgaagctgcggtcagccgggcaaaaggtccaggactgctacttc
taccagatcttcatggacaagaaggataaagtgttagtgcccacaagccagcagctttta
gagtggtccttcatcaacagcgatctcaaattcgctgaggctccctcctgccttataata
cagatgcctcgctttgggaaggacttcaaaatgttcaacaagatcttcccctctctcgag
ctcgacatcacagacttacttgaagacactcctagggagtgccgcatctgtgggggtctg
gccctatacgagtgcagagactgttacgaggacggtgacatcacagctgggaaaatcaag
cagttctgtgaaaagtgcaatacccaggtccacctccacccacggcggaagtcccaccgg
cacgggaagctgtccgtgcccaaggaactgcaggagagcgtgtggcgtcagggcagcttc
ccccaccagcggatggagctgttcgccgtgctctgcatcgagaccagccactacgtggcg
ttcgtcaagtacggcgccgccgactccgcctggctcttcttcgacagcatggccgaccgg
gatgggggccagaacggatttaacatcccccaggtgtcgccgtgtccggaggtgggggcg
tacctgaagatgacccccgaggagctgcacgcactggaccccaagaacatccagggctac
gcccgccgcctgctgtgtgacgcctacatgtgcatgtaccagagtcccaccatgagcctg
tacaaatga
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