Alosa sapidissima (American shad): 121681635
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Entry
121681635 CDS
T11137
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121681635 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
asad03051
]
121681635 (psmc3)
Proteasome [BR:
asad03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121681635 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
PhoH
AAA_33
AAA_7
CCDC22_CC
AAA_14
AAA_28
ATPase
Sigma54_activat
IstB_IS21
Golgin_A5
RNA_helicase
AAA_24
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
121681635
NCBI-ProteinID:
XP_041917414
LinkDB
All DBs
Position
14:complement(3355431..3363658)
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AA seq
427 aa
AA seq
DB search
MSSLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttgaatgacagatcagtttgggatgaggtggaggatgggatcggggaggaa
gtcctcaaaatgtccactgaagaaattgttcagaggacgcgtcttctggacagtgaaatc
aagatcatgaagagtgaagtgctaagggtgacccatgagctccaagctatgaaggataag
attaaggagaacacagagaagatcaaagtcaacaagaccctgccttacttggtctccaat
gttattgagctgttggacgtggaccccaatgatcaggaggaagatggagccaacattgat
ctggactctcagagaaaggggaaatgtgcagtcatcaagacctctacgagacagacatac
tttttgccggtcattggtttggtggatgctgagaagttgaagccaggggaccttgtgggt
gtgaacaaggactcctacctgatcctggagaccctccccactgagtacgactctcgggtc
aaggccatggaggtagacgaacgccccactgagcagtacagcgacattggaggcctcgat
aaacagatccaagagttggtggaggccattgtgttgcctatgaaccacaaagagaagttt
gaaaacctgggcatccagccgccgaagggtgtactgatgtacggacccccaggaacagga
aaaactctgctggccagggcctgtgctgcccagaccaaggcaacctttttgaagttggct
ggccctcagctggtccagatgttcattggtgacggtgccaagttggtccgcgatgctttt
gctctggccaaagagaaggccccatccattattttcattgatgaactggatgccattgga
accaaaaggtttgacagtgagaaggctggcgatcgtgaggtgcagaggaccatgctggag
cttctcaaccagctggatgggttccagcccaacatgcaagtcaaggtcatcgctgccaca
aacagagtggacattctggaccctgcgctgcttcgttctggacgtttggaccgcaagatt
gagttcccaatgcccaacgaggaggcgcgtgcccgtatcatgcagatccactcccgcaag
atgaacgtcagtcctgatgtgaattatgaagagctggccaggtgcacagatgacttcaat
ggtgcccagtgcaaggctgtgtgtgttgaggctggtatgatagcgcttcgcaggggagct
actgagcttaaccacgaggactacatggagggcatcctggaggtgcaggccaaaaagaag
gccaacttgcagtactatgcctga
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