Alosa sapidissima (American shad): 121681650
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Entry
121681650 CDS
T11137
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04136
Autophagy - other
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121681650 (atg13)
04136 Autophagy - other
121681650 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121681650 (atg13)
03029 Mitochondrial biogenesis [BR:
asad03029
]
121681650 (atg13)
Membrane trafficking [BR:
asad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121681650 (atg13)
Atg1 complex
121681650 (atg13)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121681650 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121681650
NCBI-ProteinID:
XP_041917433
LinkDB
All DBs
Position
14:27767939..27778103
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AA seq
550 aa
AA seq
DB search
MDNDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPSIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQMAGLGEGFQTVRVGVVGTPI
GTITLSCAYRTNLAFMSTRCRDSQFERTAPIMGIIIDHFVERPFGNVGHMHPCNYRAPGE
EEGGAYAGVEDSQEVCTTSFSTSPPSQCVLTVSKAHLKTPKPVLMDTLKVPVMGLGFSHQ
LYSSRLSYQPPTLGAADLCHPATCSAAHPHQMAVPGKEGGVPQVPMQPYHGAQAEHGRRP
SCPSSDTAHHIPATPSSSGEDAETCSRSSDLKSASPSDTLETTFTRKVGAFVNKPTTQVT
TASLDLPFAAFAPRAYDLEENDPMVHPPDSPATSSPLQGSLHSQGSSETGEQAQEDFVMV
DFKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSAQSMAEDLDSLPEKLALYEKNID
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgatctgagcccacaggataaaaaggacctggacaaatttattaaattcttt
gcattgaagactgtgcaggtgatcgttcaagctcgcctaggagagaaaatatgcacgcgc
tcatcatcttcacccactggctcagattggttcaatctagccatcaaagatattcctgaa
gtgacgcatgaagccaagaaagctttggccggacagctacccagcattgggcgctccatg
tgtgtggaaatctcactcaagacgtcagagggggattccatggaacttgagacatggtgt
cttgaaatgaatgaaaagtgtgacaaagacatcaaagtctcttacacggtttataaccgc
ctttcattactcctaaagtcattgttggctattacaagggtgaccccagcctataaattg
tctcgaaagcaaggccatgactatgtcattttatacagaatatattttggagaggttcag
atggcaggacttggagaaggatttcaaactgtacgtgttggagtcgttggcacccccata
ggcacgatcacactgtcttgtgcctataggacaaacctggcctttatgtctacacggtgt
agagactcacaatttgaaagaacagcccccatcatgggcatcatcatcgaccactttgtt
gagcgtccctttggaaatgttggccacatgcatccatgcaactacagagctcccggagag
gaggaagggggggcttatgcaggggtggaggattcccaggaggtgtgcaccacatctttc
tccacctctccaccctctcagtgtgtgctcactgtaagtaaggcccatttaaagacgcct
aaacctgttctgatggacactctgaaggtcccggtgatgggcttgggcttttcacaccaa
ctctacagctctcgtctgtcctatcagccacccactctgggagcagccgacctttgtcat
cctgccacctgtagtgcggcccatcctcaccagatggcagtgcctggaaaggagggtggt
gtcccccaggtgcccatgcagccctatcacggtgcccaggcagaacatggccgaaggccc
tcctgcccctcctctgacacggcccatcatatccctgctaccccttcaagcagtggagaa
gatgcagagacatgctccaggagcagtgacctgaagagtgcctctccgtcagacaccttg
gagacaacattcacccgcaaagtgggagcctttgtcaacaagcccactacacaggtaaca
accgccagtctggatttaccatttgcagcatttgcaccccgggcctatgacctagaggag
aatgaccccatggtccacccaccagactctccagccacatcctcacctctgcaaggcagc
ctgcattcccagggatccagtgagactggagagcaggcacaggaggactttgttatggtg
gattttaagccagctttctccaaggatgacctcctgcccatggacttgggcacattctac
agggagttccagaaccccccacaactggctagtcttaccatagatgtcagtgcacaatct
atggcagaagatcttgactcacttccagagaagctggctttatatgaaaagaatattgat
gaatttgatgcatttgtggaaaccttacagtag
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integrated database retrieval system
