Alosa sapidissima (American shad): 121681728
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Entry
121681728 CDS
T11137
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121681728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121681728
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121681728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
121681728
NCBI-ProteinID:
XP_041917580
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Position
14:complement(11535213..11562313)
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AA seq
573 aa
AA seq
DB search
MSSSILRRNSSKQGLQNLQRITAQRSVEDAEEIERERRRRARQRFGAQNGSAGSGETQHS
GGYTLEDDISESAELKPSHQSAMEEDEGFSDWTQRLEKRRQKRMEEHASSTEEDRTVPAP
PRQNGTTRHTSTSVSILKSTTHRPLHNGAGGGPQEEEGWSWRRHKEQEDTGHRDWEGEED
IRKTGAKAKADKKPLIISYTSKLVLQHDVRYMNGNGVTDGGDVTSHMTTSKIIPGAESLA
EDDEAFEAAQEREAKLQSIRLSHQQKEQQELDELRQKGMDAQQELEDLNMRREERRRARE
EEERRREEEEQLRKAREEEERQRMREEIERRRMEATERRMKRLSTSSAEEEPFSPLSPRS
PSFKKLLIQFYPNENEERVTAESTCSITERTESLKCSLKKSNSLKSAQPPVPIAKIDDRL
EQYNQAIEISSKEAKAAKQALMEIPSPPEPVASKKSLFEAGDAWNQNASKTTPSKDAEEL
KVGVADLITKWAQGSSDGSVKTSPSKAAEVKPGDVLNKKNLWENLGDSPGNSGPGAKGTP
CGKKYKFVKTRHGKYEKIAVDDEYTFEKSGEDL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcaatcctgagaagaaattccagcaaacaaggattacagaatctccagagg
ataacggcccagaggagtgttgaggatgcagaggagatcgagcgtgagcggagacgaagg
gccaggcagaggtttggggcccagaatggctcagcagggtctggggagacccagcacagc
ggtggatatacactggaggacgacatctctgagagtgcagagctcaagccctctcaccag
tcagccatggaggaggacgagggcttcagcgactggacccagaggctggagaagcgtcgg
cagaagcgcatggaggagcacgctagttcgacggaggaggacagaacggtaccggcgcca
cccagacagaacggcaccaccagacacaccagcacgagcgtttccatcctgaagtccacc
acacacagaccactgcataacggagcaggaggagggccacaggaggaggagggctggagc
tggagaagacacaaggagcaggaggacacgggtcacagagactgggagggagaggaggac
atcaggaaaacaggagcaaaggccaaggcagacaaaaagccgctgataatttcatacacg
tccaagctggtcctgcagcacgatgtgaggtacatgaacggcaatggagtgacagacgga
ggggatgtgacatcacacatgaccacatccaagatcataccaggggctgagagtcttgca
gaggatgatgaggcatttgaggctgcccaggagcgggaggccaaactgcagagcatccga
ctaagccaccagcagaaggagcagcaggaattagacgagctgaggcagaagggcatggat
gcccagcaggagctcgaggatctcaacatgaggagagaggagcgccggcgcgcccgcgag
gaggaggaaagacggcgggaagaagaagagcagctgcgcaaagccagagaggaggaggag
aggcagaggatgcgagaggagatcgagcggaggaggatggaggccacggagaggaggatg
aaacgcctgagcacctccagcgccgaggaggagcccttcagtcccctcagtccgaggagc
ccatcttttaagaagcttctcattcagttctatccaaatgagaatgaagagagggtgact
gcagaaagcacatgctcgattacagagagaacagagtctttgaaatgctcgcttaagaaa
agcaacagcctgaagagcgctcaacctcctgtaccaattgccaagattgacgacagactg
gaacagtacaatcaggccattgagatttcctcaaaggaagctaaagcagccaagcaagct
ttgatggagatccccagcccccctgagcccgtggcctcaaagaagagcctgtttgaagca
ggagatgcctggaaccagaatgcctcaaagaccactccatccaaagatgcagaggagttg
aaggtgggtgtggctgaccttatcaccaaatgggcacagggcagctcagacgggagtgtg
aagacctcgccctcgaaggcagcggaagtgaagcctggtgatgtattaaacaagaagaac
ctctgggaaaatctaggagactcacctggaaactctggacccggagcaaaaggcactcct
tgtggcaagaagtataaatttgtcaagacccggcatggaaaatatgaaaagattgcagtt
gatgatgaatacacatttgagaaatcaggtgaagacttatga
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