Alosa sapidissima (American shad): 121681775
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Entry
121681775 CDS
T11137
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121681775 (cdhr5a)
Cell adhesion molecules [BR:
asad04515
]
Cadherins
Cadherin related
121681775 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121681775
NCBI-ProteinID:
XP_041917634
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All DBs
Position
14:4624318..4630367
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AA seq
713 aa
AA seq
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MEQHKYYGKSLNGLLCCLLTVCLHKLSQSQKLCTVPPEPVSIRENSTVDTFIATVNTTER
DITLTLMENPEEAFELRGTDLMAKKGLDFEALLSEDALTVRIKCNKTGFKAVTLPLIVQV
ENINDNPPTFAKDEYVLEIDELMPINSSIGLIEASDLDSDLLYYTLDPSTSKYFRLQTEN
YPKILVQKIVEYDVIQKMTLILYVQDTPIPTEPGEPSFTATTTISVNVRDIDNRPPWFQP
CTKATIGIAKLCYSSGYKGRVNLTEKQEGPLPLQPGPIYAKDGDKNRNEQISYKILKGNE
DSIFQIDENTGNITMLKAADITGPITLTVLASQVTNRDQFAITSVTIEVMKKSRNPPRFE
KERFEAFVYTTSGPENMVMRDRASNRPFRVRARDEDFATGMNPDIRYEVQYSSYVNVTTD
GFVLLKKAVKTDSFALQIRAVDISTGESGTAALSVQVIPVPGVQSPSEGYRAGDMALLGF
VMAALLVMSLIVIGFLISRLRKGNANALKLSECLDPCLKLTQPRRRPRDSMQFTNDGFMN
EGGGDANRGLPPRRHVGPDRRPDSIKTARARAMIRERQKPPCSSCGHRVQANHVHNSGPP
AQAKARPAAGQGAEQVRSILTKEKKRDERHKSVWFKESADTSEIQVEIIPDNIGLKPEED
AGDLDADSVNSAAPVGSEMELGDLTAMITQDLGGPGTSASDNKEDENGDKPDQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcacaaatattacggcaaatcgctaaatggcctcctctgctgcctcctaaca
gtctgccttcacaaacttagccagtcgcaaaaactgtgcacggtccccccagagcctgtg
tccatcagagagaacagcacagtcgacactttcattgccacggtcaacaccacggagcgg
gatatcacgctgacactcatggaaaacccagaggaagcttttgaactgcgagggacagac
cttatggccaagaaaggattagattttgaggctctgcttagtgaagatgcacttacagtc
aggatcaaatgcaacaaaactggcttcaaagcagttaccctacctcttattgtacaagta
gaaaacatcaacgataatcctccaacctttgccaaggatgaatatgttttagagattgat
gagttgatgccaataaattccagtattggacttattgaagcttcagatcttgattcagat
ctactgtattacactttggatccatccacgagcaaatatttcagactgcaaacagagaac
tacccaaagatcttggtgcaaaagatcgttgaatatgatgtcatccagaagatgacactg
attttatacgtccaggacacacccattcctacagaacctggtgaaccgtctttcacagcc
acaaccaccatctcagtcaatgtgcgggacattgacaaccgcccgccatggttccaacca
tgcactaaggcaacaatcggcatcgcaaagctctgttatagctcaggatacaagggcaga
gtaaacttaactgaaaaacaagaaggtcctttaccgttgcaaccaggaccaatatatgcg
aaagatggagataaaaacagaaatgagcagatcagttacaaaattctaaaaggaaatgag
gacagcatatttcaaattgatgagaacactggaaacataacaatgctgaaggctgctgac
atcactggcccaattaccttgacagttctggcctcacaagtgaccaatagggatcagttt
gccatcacctccgtcaccattgaggtgatgaagaagagtcggaatccgccgaggtttgag
aaggagcggtttgaggccttcgtctacactacctccgggccagagaacatggtgatgagg
gacagggcatccaacagaccctttagagttagagcacgcgatgaggatttcgcaactggt
atgaatcctgacatacgatatgaggtccagtacagcagctatgtcaacgtgaccacagat
ggttttgttcttttgaagaaggcagtgaaaacagactcctttgctctgcagatccgtgcg
gtggacatctctaccggggagtcagggacagctgctctgtctgtacaagtcatacctgtg
ccgggtgtccagtcaccgtctgaaggctacagggcaggagacatggcgttgctgggcttc
gtcatggcggcgctgctggtgatgagccttatcgtcatcggattcctcatctcgcgcctg
agaaaagggaacgccaatgcgctcaagttatcagagtgcctagatccatgcctcaagctc
acccagcccagaaggcgaccccgagacagcatgcagttcaccaatgacggcttcatgaac
gaagggggaggagacgccaatagagggcttccccccaggagacacgtgggcccagaccgc
aggccggactccataaagactgcccgggcccgagcaatgatccgcgagcggcagaaacca
ccatgcagctcctgtggccatcgcgtccaggccaaccacgtccacaacagcggcccccct
gctcaagccaaggcccggccagctgcagggcagggagcggagcaggtgaggtccatcctc
accaaggagaagaagagggacgagcggcacaagagcgtctggttcaaggagagcgccgac
acctctgagatccaggtggagatcatcccggacaacataggcctcaagcctgaggaggac
gcgggggacctggacgcagactcggtgaactccgctgcacctgtggggagcgagatggag
cttggagacctcactgctatgatcacgcaagatctgggaggcccagggacctctgcttct
gataacaaggaggacgagaatggagacaaacctgaccagtag
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