Alosa sapidissima (American shad): 121681797
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Entry
121681797 CDS
T11137
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04517
IgSF CAM signaling
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121681797 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121681797 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121681797 (rapgef2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121681797
NCBI-ProteinID:
XP_041917666
LinkDB
All DBs
Position
14:complement(13969246..14080420)
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AA seq
1622 aa
AA seq
DB search
MASYVDNRFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQQGERQTIIDTVDPYPAGKPPIARACHTECPKP
QLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRAEMLCMGNSF
GVSPTMDKEYMKGIMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGEKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREKMCGHLRLLNIACAA
KAKLRVVTLTKASRDTPLAFTLLGGAEKGVRIFIDSVEPGSKAAEAGLKRGDQILEVNGQ
NFENVQLSKANEILRNNTHLSITVKTNLLVFKELLARPDQDHEHDPEDELDRKNGAPHIP
KIGDMKKASRYSIPDLAVDVEQAMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKP
YNDVGVGQSQDDSIVGLKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPEAAAAN
MSDQVLRVFKADQQSRYIMISKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIK
QRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQELLREGQIGLLQLSTVEVATQ
LSMRAFQLFCAIEPTEYIDDLFKLRRPGLPAAAATTGTAEPPVSSLKRFEEAINRETFWV
TSEVVREPNQLKRMKIVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPS
KYEKLFSDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGL
VNFEKLRMIAKEIRHVGRMAAVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGG
HKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLTLDTNEENLQTLSLQCEPSVNTLPKSA
GEKRRPDTSPVVSRAIHARPAPLKANQALTVPAVALYPSRKKVPVKDLPPFGTSSPQSLK
KILSLSEESSDRHRRPAEDTVSNASSQMSSPPTSPHSSPKKGYGRAGDNLSDSGHSEISS
RSSLVSTSSLDMPHDDRRLRHGGPDTHLGPRLERRATTDPDQYSLGSYSSMQDCRALYAG
ATVLSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAEGAG
LWAGRGSWASSAGSSSSSSVACWGEEPEGDTGTIKRRGGKDVSGDADSSSITSTGSEESK
QASRRPSPITVGNTKAVVTRKEGRYRDPPPTPPGYTGLTLSDVTMEGSVPAHAHTLTHGG
RRPPDYTTALQRSRLVTHSPDSQQALAASADTHTRHTHSQDGGEEEEEEEEEEEEDEQVS
AV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttacgtggataaccgctttcgacaggcggtgatgatgaacccggctgagaga
acgcaacaggatctggagattgtgtactcatatcttcatgggatggaggcgttgtcaaat
ctcagagagcaccagctcaggatcatgtgtgaaacggtccgctatgagaggcatgaagcc
aatgaggtcctgtactaccctgatgatgtggggagctgctggtacatcctgctctccggg
tcagtcttcatcaaggagtccatgttcctacccaggagcagctttggcaagcggtcggcc
ggtagcctgcgccgaggatgtgagtgcatcgttctggaaccctctgagatgattgtggtg
gactatatggacgagaatgaggagtatttccagaggcaggcttctcacaggcagtcccgc
cggcgcttccgcaagatcaaccagcagggagagaggcagaccatcatcgataccgtggac
ccctatccagcagggaagccccccatagcacgcgcatgccacacggaatgccctaaacca
cagctccctgcggactttagcagattgcacctggctgacggtctccatccccaggtgacg
cacgtaagctccagccaatcaggatgtagcatcaccagtgattctggaagcagtagcctg
tccgacatctaccaggcgacggagagtgagccgggcgacatggacctgagtgggctgccg
gagacggcagtggactcggaggaagacgatgatgaggaagatatcgagcgcgcctccgac
cccctcatgagccgagacatcgtccgtgactgcctggagaaggatcccatggaccgcacg
gacgacgacatcgaacaactgctggagtttatgcaccagctcccagccttcgccaacatg
accatgtccgtcagacgggagctgtgtgccgtcatggtgttcgccgtggtggaaagggcc
ggcaccatcgtcctcaatgacggagaggagctggactcgtggtcggtgatcctgaatggc
tcagtggaggtgacctatccggagggccgagcggagatgctgtgcatgggcaacagcttt
ggcgtctcccccacgatggacaaggagtacatgaagggtatcatgaagactaaggtggac
gactgccagttcgtgtgcatagcccagcaggactattgctgcatcctgaaccaggtggag
aagaacatgcagaaggtagaggaggagggggagatcgtcatggtgaaggagcaccgcgag
ctggacagaactggaaccaggaagggacacattgtcatcaagggcacgacggagcgcttg
accatgcacctggtggaggagcactcggtggtggaccccacctacattgaggacttcctg
ctgacctaccgcaccttcctgtccagccccatggtggttggcgagaagctcctggagtgg
ttccacgacccaagcctcagggataaggttacacgggtagtgttgctgtgggtgaacaat
catttcaatgactttgagggtgaccctgccatgacccactttctggaagagtttgagaac
aatctagaaagagagaaaatgtgcgggcacttacgactgttaaacatcgcctgcgcagcc
aaagccaagctgcgggtggtgacgctgaccaaggcgtcacgggacacgccgctagccttc
acactgctgggcggcgcggagaagggcgtccgcatcttcatcgacagcgtcgagcccggc
agcaaggccgcagaggctggcctcaagagaggagaccagattctggaggtaaacggacag
aactttgagaatgttcaactgtccaaagccaacgagatcctacggaacaacactcacctg
tctattactgtgaaaaccaacctgctggtgttcaaagagctgctggctcgaccggaccag
gaccacgagcacgaccctgaggacgagctggaccgcaagaacggcgccccgcacatcccc
aagatcggcgacatgaagaaggcgagccgctactcgatcccggacctggcggtggacgtg
gagcaggccatggggctggagaaggtcagcaagaaggccaaggccaacactgtgggaggc
cgcaacaagctcaagaagatcttcgacaagacgctcaccagcatcctgccccccaagccc
tacaatgatgtgggcgtgggtcaatctcaggatgacagcatcgtggggctgaagcagtcc
aagcagattcctcctgcgctgcccgtcagtgggaacctctcgtccagcaaccccgacctg
ctgcagtcccaccaccgcatcctcgacttcaacaaccagccagaggctgctgcagcaaac
atgtcggaccaggtgctgcgtgtgtttaaggcggaccagcagagtcgctacatcatgatc
agcaaggacacgacggctaaggaggtggtggctcaggccatccgggagttcgcgctcacc
gccgccgcagaagcctattcgctgtgcgaggtgtccgtcacccccgagggtgtgatcaag
cagaggcgcctcccagagcagctctccaaactggccgacaggatccagctcagtggcagg
tactacctgaagagcaacatggagacggagacgctgtgctcggacgaggatgcccaggag
ctgttgcgtgagggtcagatcggtctgctgcagctcagcacggtggaggtggccactcag
ctgtccatgcgcgcgttccagctcttctgcgccatcgagcccaccgagtacatcgacgac
ctcttcaagctccgccggcccggcctgccagctgccgccgctaccacgggaaccgccgag
ccgcccgtgtccagcctaaagcgcttcgaggaggccatcaaccgcgagaccttctgggtg
acgtccgaggtggtgcgggagcccaaccagctgaagaggatgaagatcgtcaagcacttc
atcaagatcgccctgcactgtcgcgagtgcaagaacttcaactccatgttcgccatcatc
agtgggttgaacctggcgcccgtctcacggctgagggggacgtgggagaagctgcccagt
aagtacgagaagctgttcagcgacctgcaggacctgttcgacccgtccagaaacatggcc
aagtaccgcaacgtactcaacaaccagaacctgcagccgccaatcatccccctcttcccc
gtcatcaaaaaggacctcaccttcctgcacgagggtaacgactctaaggtggatggcctt
gtgaactttgagaagctacggatgatcgccaaggagatccgtcacgttggacgcatggcc
gccgtcaacatggaccctgcactcatgttccgcaccaggaagaagaagtggcgcagtcta
ggatcgttaagtcagggcagtgccaacgcggcggtcctggacgtgacgcagacgggcggg
cacaagaagcgtgtgcgccggagctccttcctcaacgccaagaagctgtacgaggacgcg
cagatggcccgcaaggtcaagcagtacctgtccaacctcacgctggacactaacgaggag
aacctgcagacgctctcgctgcagtgcgagcccagcgtcaacacactgccgaagagcgcg
ggcgagaagcggcgtccagatacgtctccggtggtgtcgcgcgccatacacgcccgcccc
gcgccactcaaagccaaccaggcactcacggtgcccgccgtcgccctctacccctcacgc
aagaaggtgcccgtcaaggacctgcccccattcggcacgagttctccgcagtcgttgaag
aagattctgtccctgtccgaggagtccagcgacagacaccgccggcccgcggaggacacc
gtgtccaacgcctcctcccagatgtcctctccccccacctcgccacacagctcacccaag
aaaggttacggccgggctggggataacctgtcggactcgggccatagtgagatctcgtcg
cggtccagcctggtgagcacgtcctctctggacatgccccacgacgaccgccgcctgcgt
cacgggggcccggacacacacctggggccacgtctggagcgcagggccaccacagaccct
gaccagtacagcctggggtcgtactcatccatgcaggactgccgtgctctgtacgcgggt
gcgacggtgctgtcctctcccagctcggaggagctgacgcaggaccagggcgaccgcgtg
tcattggatgctgccgacagtggccggggcagctggacgtcttgttccagcggttcccat
gacaacatccagacgatgcagcagggccgcagttgggagacgctggcggagggggcgggg
ctgtgggcggggcgtggcagctgggcgtcgtcggctggctcctcctcctcgtcctcggtg
gcgtgctggggggaggagccggagggcgacacgggcaccatcaagcgccgtggcgggaag
gacgtcagtggcgacgccgactccagcagcatcacctccaccggctccgaggagtccaag
caggccagccgccgcccgtcccccatcaccgtcggcaacaccaaggctgtcgtcacgcgt
aaggaggggcggtatcgtgacccccctcccacgccacccgggtacacgggcctcaccctc
tcagatgtgacgatggagggcagcgtgcccgcacacgcacacacactcacacacggcggg
cgccggccaccggactacaccaccgcgctgcagcgctcccggctcgtcacacactcgccg
gactcccagcaagctctcgctgcttcagccgacacacacacacgacacacacactcccag
gacggaggggaggaggaggaggaggaggaggaggaagaggaggaggacgagcaggtgtct
gcagtgtga
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integrated database retrieval system
