Alosa sapidissima (American shad): 121681882
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Entry
121681882 CDS
T11137
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121681882 (pax6b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121681882 (pax6b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_Tnp_IS1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121681882
NCBI-ProteinID:
XP_041917759
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Position
14:complement(6325686..6345397)
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AA seq
459 aa
AA seq
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MPQKEYHNQAAWESGVASMMQNKVYDVCDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQMHVDAKVQVLDNEHVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGA
DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSDE
TQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFS
NRRAKWRREEKLRNQRRQASNPSSHIPISSSFNTSVYQAIPQPTTPVSFTSGSMLGRSDT
ALTNTYSGLPPMPSFTMANNLPMQPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQAHMNS
QSMAPSGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaaagaataccacaatcaagccgcgtgggagtctggtgtggcgtcgatgatg
cagaacaaggtgtatgacgtctgtgatgaaggtcacagcggcgtgaaccagctcggtggt
gtatttgttaacggaagacccttgccggactcaaccagacagaaaatcgttgagctcgca
cacagcggtgcgcggccgtgcgacatctccaggatcctgcagatgcatgttgatgcaaaa
gtccaagtgctggacaatgaacacgtgtcgaatgggtgcgtgagtaagatcctgggcaga
tattatgagactggctccatcagaccacgggcgattggaggtagcaaaccacgagtagcg
acgcccgaagtggtcggtaaaatagcacagtacaaaagggagtgtccctcaatcttcgcc
tgggaaattcgtgaccgactactgtcagacggcgtgtgcaccaacgacaatatacctagc
gtgtcgtcgataaacagagtccttcgcaacctggctagcgaaaagcaacagatgggtgca
gatggcatgtatgacaagctgagaatgctcaacgggcagacggggacgtggggaacccgc
ccagggtggtaccctggaacttctgtacccgggcaacctaatcaagatggatgtcagcag
caggatggtgcaggagaaaacacaaactccataagctccaacggagaggactcagatgaa
acacagttgcggctccagctgaagagaaagttgcagagaaatcggacatcatttacacaa
gagcagattgaggccctggaaaaagaatttgaaagaactcattatccagatgttttcgca
agggaaagattggcagccaagattgatttaccagaggcaagaatacaggtgtggttctca
aacaggagagcgaagtggaggcgagaggagaagctgcggaatcagcgccgacaggcgagc
aacccctccagtcacatccccatcagcagcagcttcaacaccagtgtctaccaggccatt
ccacagcccacaacaccagtgtctttcacatcagggtccatgttaggcagatcagacaca
gccctcacaaacacatacagcggattgcctcccatgccaagtttcacaatggccaacaac
ctgcctatgcaacccagccagacatcctcctactcctgcatgctgcccacgagtccctct
gtgaatgggcggagctacgacacgtacacaccccctcatatgcaagcacacatgaacagc
caatcaatggccccttctggtaccacctcaacaggactcatctccccaggagtatctgtt
ccagtccaagttccaggcggcgagcctgacatgtctcagtactggtcaagactacagtaa
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