Alosa sapidissima (American shad): 121682026
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Entry
121682026 CDS
T11137
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121682026 (gigyf2)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121682026 (gigyf2)
Surveillance factors
Other surveillance factors
121682026 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121682026
NCBI-ProteinID:
XP_041917996
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Position
1:complement(37654315..37688789)
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AA seq
1323 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGGSSNTVASPPLSPALPKYKLADYRYGREEMLALYVKDNK
IPIDLHDKEFLPILQEDPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPR
GRSSSRGRGRGRGDGGFYQRSFDDVEGGFGRGVREMHRSQSWEERGDRRFEKPGRKDPEA
APPHYQLNHIRANYEDAVPGLVRKHDFTRSESENWRMSREEQNDVPRSAGWREHPERRRF
PFDARGEEERGYRRPRSGSGSLDDDRDALPEWCLEDAEEETGIFDSSGAFHSLKKGPKEP
ILEEAELDFRPLEECEEHWERDESESEETKDTAAEARKEGERREVEELGKPEEEAITSAP
VPAAPTPPEPTAPSPLSPIQPVAAEASQRPVERAPDVLPEPCKVPQHTPASTGMVEGISL
PHVASASSDMPAPIPTLPPPQPTQPPQPTLPQSLEIPAAVPTNLPFTAGVMAPIGRPGAM
PHDADEDEGLKHFEQEAEKMVAYLQDGVVDDEQLAKSAERPKPTALPISHDVAFKWFYKD
PQGEVQGPFSNQEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKIWGRVPFTPGPAAPP
LLGDVDQERLKRQQELTAINLYQMQQLQYQYLLRQQFVQAQALAQQKAAALNSAPPPPPQ
PQPQQQQQINLILHQALKMRSSEPLLPPVTRSMSVPDSGSVWDMQNSSSQASCTPNMQPA
PPITAWEGSSVWDLPIDSMAPASTMEQIQQLEKAKAMKLELERREAELRAKREEEERKRM
EEALRARQEEEQRKRLEEEELARRKQEEALRRQREQEEALRRQKEEEEERLAQEEARRRL
EERRREEEKEERRQREEFLRKQEEERRKQEELEALRKREEEKRREEEAAAEAAALALQQE
EQRRRELELQRQQEAQRQRQQQQEALRRLQQQQQQQQLAHMKLPSSSKWGQQSASLTSQS
QNALSLAEIQKLEEEKERQARQEQQRQQQELLKAQQLQQPQQAQAKLSGWGNVAKQPAAT
KSLLEIQREEAQQMKQRKEQKQQQPQQQQQQQPPPPPPPQQQPQPPPPAPVQQNRANTLS
SSVWGSVSGGGGSTWGSDTSSIWGDTHNSNVGFWDEAVKEAAQPPPRKASSQKSKGNANL
SNSVSGKANKKVEEEEKLLKLFQAANKSQDGFMQWCEQTLHTLNTANNLDVPTFASFLKE
VDSPYEVHDYVRAYLGDTPQAKDFAKQFLERRAKQNANQQKPQQIQQQKPQQQGSVWGGT
TPQQVLQSNHTSLQQQQRFETVTSGKKKKKQKMVRADPSLLGFSVNAASERLNMGEIETV
EDF
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacccagacacttaactttggaccagaatggctccgggctctgtctggtgga
ggtggtagcagcaacactgttgcttcaccacctctctcccctgctttgccaaagtataaa
ctagcagactaccgttatgggagggaagaaatgctagcactttatgtaaaggacaacaag
attcccatagatctacatgacaaggaatttcttcccattttacaagaggatcccttacca
ccattggcccttgtaccttttacagaagaggagcagagaaatttctctatgtctgtaaac
agtgcggcggtgcttcggctgacaggaagaggtgggggcactgtggtaggggcgccgaga
ggtcgaagttcttcgaggggacgaggccgaggcagaggagacggagggttttaccaaaga
agttttgatgatgtggagggaggctttggacggggagtaagggaaatgcatcgctcgcaa
agctgggaggagaggggagaccgaaggtttgaaaagcctggacgaaaagatccagaagca
gccccacctcattatcagcttaaccacattcgagccaactatgaggatgcggtgccgggc
cttgtgcgtaaacacgacttcacacgatcagagagcgagaactggcgcatgtctcgtgag
gagcaaaacgatgtgcctcgctcagctgggtggcgggaacacccagagcgccggcggttc
ccgttcgacgcacggggggaggaggagcggggttaccggcgaccccgctccggcagcggc
agcctggatgacgaccgtgacgccctgcctgagtggtgcctggaggacgcggaggaggag
acgggcatctttgactcttccggagccttccactcactcaagaagggtcctaaggagccc
atcctggaggaggcagagctggactttcggcctctggaggagtgtgaggaacactgggag
agagacgagagcgaatcagaggagaccaaagacacggccgcggaggccaggaaggaggga
gagaggagggaggtagaggaactgggaaaaccagaggaagaagcgatcacatctgctccc
gttccggcagcccccacccctccagagcccactgccccttcacctctctcccctatccag
ccggtagcagccgaggccagccaacggccggtagagagagccccagacgtcttacccgag
ccctgcaaagtaccccagcacacccctgcctccacgggcatggtggagggcatctcactc
ccccacgtcgcctccgccagttcagacatgcctgcccccatccccacactaccgccgcca
cagccaacacagccgccacagccaacactgcctcagtctctagagatacccgcagcagtc
cccaccaacctacccttcacagcgggcgtcatggcacccatcggcaggcccggtgccatg
ccccatgatgcggatgaagatgagggactaaagcactttgaacaggaagcagagaaaatg
gtggcttacctccaggacggggtggtggacgatgagcagctggccaagagcgctgagcgg
cccaaaccaacagccttgcccatcagccacgacgttgcttttaaatggttctacaaggac
ccacagggggaggttcagggacccttcagcaatcaggagatgaccgagtggtttcaggcg
ggctacttcacaatgacactgttggtcaagaggggctgtgacgaggtcttccagccgttg
ggcgagatcataaagatctgggggagggtaccgtttacacccggaccagcggcaccccca
ctcctgggggatgttgatcaggagagattaaagagacaacaggagctaactgcaatcaac
ctctatcagatgcagcagctgcagtatcagtatcttctcaggcagcagtttgtgcaggcg
caggccctggcccagcagaaagcagcagctctcaactccgcacccccacctccaccacag
ccacagccacagcagcagcagcagatcaacctgatcctccaccaggccctgaagatgagg
tcctcagaacctctgctgccgccggtcactcgctccatgtcggtaccggactctggttcg
gtgtgggacatgcagaactcctcctctcaggcctcctgtacccccaacatgcagcctgca
ccgcctatcactgcatgggagggcagtagtgtgtgggatttgcctattgactcaatggca
ccagcctctaccatggaacagatccagcagctggagaaggccaaggccatgaagttggag
ctggagcggcgtgaggcagagctgcgggccaaacgtgaggaggaggagaggaagaggatg
gaagaggctctgagagcccggcaggaggaagagcagcgaaagcgtctggaagaggaggag
ctggcgcgaaggaaacaggaggaggcactgaggaggcaacgtgagcaggaggaggcgttg
cgccggcagaaggaggaggaggaggagaggttagcccaggaggaggcgcgccgaagactg
gaggagagaaggagagaagaggagaaggaggagaggaggcaaagggaagagttcctccgc
aaacaggaagaggagaggcggaaacaggaggagctggaggccctgcggaagcgcgaggag
gagaagcggcgcgaggaggaggcggcagcggaggccgcagccttggcactgcagcaggag
gagcaacggcggcgcgagctggagctccagcggcagcaggaggcgcagaggcagaggcag
cagcagcaggaggccctccggcgcctgcagcagcagcagcagcagcagcagctcgcccac
atgaagctcccctcttcttcgaagtggggtcaacagtctgcctccctgacttcccagtcc
cagaatgcactgtcactcgctgagatccagaaactggaagaggaaaaagaacgccaagca
cgacaggagcagcagcggcaacagcaggagctgctgaaggcccagcagctgcagcagccc
cagcaggcccaggccaagctctcaggctggggcaacgtggccaagcagccggccgcaacc
aagtccttgctggagatccagcgagaagaggcacagcagatgaagcagaggaaggagcag
aagcagcagcagccacaacagcaacagcagcagcagccgccgccgccgccgccgccgcag
cagcagccgcagccaccgccaccggcgcctgtccaacagaatcgagccaacacgctgagc
agctctgtgtggggctctgtgagtggtggcggtggctccacctggggctcggacaccagc
agcatctggggcgacactcacaactccaacgtaggcttctgggacgaggctgtaaaggaa
gctgctcagccgcccccacgcaaggccagctctcagaaaagcaagggaaacgctaacctc
agtaactcagtgagtgggaaagccaataagaaagtggaggaagaggaaaagttgctaaaa
ctgttccaggcagccaataagagtcaagatggcttcatgcagtggtgtgagcagactctg
cacacgctcaacactgccaacaatctggacgttcctacgtttgcatccttcctgaaggag
gtggactccccctatgaagtgcatgactacgtcagagcctacctcggtgacacgccccag
gccaaggactttgccaaacagttcctggagcgccgtgccaaacagaatgccaatcaacag
aaaccgcagcagatccagcagcagaaaccacagcagcagggctctgtttgggggggaacg
acaccacaacaagttcttcagtccaaccacactagcctccagcagcagcagcgctttgag
actgtgacatcagggaaaaagaagaaaaagcagaagatggttcgagcagaccccagcctc
ctcggtttttcggtcaatgccgcctctgagaggttgaacatgggtgagatcgagacagtg
gaggacttttga
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