Alosa sapidissima (American shad): 121682195
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Entry
121682195 CDS
T11137
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121682195 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121682195 (chrna5)
Ion channels [BR:
asad04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121682195 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121682195
NCBI-ProteinID:
XP_041918176
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Position
14:19713920..19730772
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AA seq
473 aa
AA seq
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MARYRRAAYALALLVCCFSGSSALGSPKLSSYARTEDQLFKDLFSTYQKWVRPVEELNGT
VRVKFGLAISQLVDVNEKNQLMTTNVWMKQEWIDMKLRWNPEEYLGITSIRVPSDSIWIP
DIVLYDNADGQFEATVTKTVVRYDGTISWTPPANYKSTCTIDVTFFPFDLQNCTMKFGSW
TYDGSQVDIVLADVHVDKRDYFDNGEWEIVKATGSRGLRMDENSYYPFITYSFLIRRLPL
FYTLFLIIPCIGLSFLTVLVFYLPSNSGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP
LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHHGMAPWVRRIFLHRLPKLLCMRSHVD
RYATTTSGQQRAGRMGLGGFTKGLEQEDTTPLLSSRNNLQAALDSIRYITQHVVKENEVR
EVVQDWKFVAQVLDRVFLWAFLLVSVLGSALLFIPVIYKWANIIVPSYNGISS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggtatcgccgagcagcgtacgccttggcgctcctggtgtgttgcttttcgggc
tcttctgcactaggaagccccaagttgtcctcctatgccaggacagaggaccagctgttc
aaagacctcttcagcacttaccagaagtgggttagaccagtggaggagctcaacggaaca
gtgagggttaaatttggcctggctatctcacagctcgtcgatgtgaatgaaaagaaccag
ctgatgacaacaaatgtctggatgaaacaggaatggatagacatgaagctccgctggaac
cctgaagagtacttgggcattacctccatccgagtcccctccgattccatatggatccca
gacattgtgctttatgacaatgcagatggtcagtttgaggccacagtcaccaaaaccgtg
gtgagatatgatggtaccatctcctggaccccccctgcaaactacaagtccacctgcacc
atagacgtcactttcttcccctttgaccttcaaaactgcaccatgaagtttggctcctgg
acatacgatggctctcaggtggacatcgtcctggctgacgttcatgtggacaaacgggac
tattttgacaatggcgagtgggagatcgtcaaggcgacgggcagccggggactgcggatg
gacgagaacagctactaccccttcatcacctactccttcctcatccgacggctgccgctc
ttctacacactcttcctcatcatcccttgcatcggcctgtccttcctcaccgtgctggtg
ttctacctgccgtccaatagcggcgagaagatctccctgtgcacctcggtgctcgtgtcc
ctcaccgtcttcttgctcgtgatcgaggagatcatcccgtcctcctccaaggtcatcccg
ctcatcggcgagtacctggtgttcaccatgatcttcgtcacactgtcaatcgtcatcacc
gtcttcgctatcaacatccaccaccgctcctcatccacgcaccatggtatggcgccctgg
gtgcgccgcatcttcctgcaccgcctgcccaagctcctctgcatgcgcagccacgtggac
cgctacgccactaccactagtgggcagcagcgagcaggccggatgggccttgggggcttc
acgaaggggctggaacaggaggacaccactccactgctctcctccaggaacaacctgcag
gctgccctggactccattcgctacatcactcaacacgtggtgaaggagaacgaagtgaga
gaggtggtccaggactggaagtttgttgctcaggttctggaccgggtgtttctgtgggcc
ttcctgctggtctcggttctgggttcggctctgctcttcatccctgtcatttacaaatgg
gctaacatcatcgtcccaagctacaacggcatcagcagttga
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