Alosa sapidissima (American shad): 121682259
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Entry
121682259 CDS
T11137
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121682259 (irx3a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121682259 (irx3a)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
121682259
NCBI-ProteinID:
XP_041918272
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Position
14:complement(7529533..7532950)
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AA seq
452 aa
AA seq
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MSFPQLGYQYIRPIYPQDRQGIASARPGTELSPSGALSNVLSTMYGSPFAAAQGYGAFLP
YSNDLSIFNQLGAQYELKDSPGIQHPGFAHHPAFYPYGQYQFGDPSRPKNATRESTSTLK
AWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRTRTDEEG
NVYSSDHEGDEGDKREDEEEIDLENIDTENIENKDDLDDQDELNADLKDGRSDSEISDGY
EDLQGADQRFLKSVVKEGKEIHVERDDHFHHHHHHHHSFEIKAPQPNGDQMKLNPASTNS
PPSENNAAPAQKPKIWSLAETATTPDNPRKSPLMNGSSAGPAAQTIIAPHRLISCPVGKI
QNWTNRAFSAHQLALLNSNHYLGLANQATANGLALYSRHAEEKSHNSDSAVTERSSALEA
EKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccacaggaccgtcag
gggatcgcaagcgcccgacccgggacagagttgagcccgtccggagctctctccaacgtt
ctctcaactatgtacggatcacctttcgctgcagcgcagggctatggagcctttcttcct
tattctaatgatctctccattttcaaccagttgggtgctcagtacgagctgaaagacagc
ccaggcattcagcaccctggctttgctcaccacccagccttctatccgtacggccagtat
cagtttggtgatccatccagacccaaaaatgcaaccagggagagcaccagcaccctgaag
gcctggctgagcgagcacaggaaaaacccgtatcctactaagggggagaagatcatgctg
gccatcatcaccaaaatgaccctcactcaagtgtccacctggtttgccaacgccaggagg
aggctaaagaaggaaaacaagatgacttggaccccgaggacccgcactgatgaagaagga
aatgtttacagcagcgatcatgagggagacgagggggacaagagggaagacgaggaagaa
atcgatttagaaaatattgacacggaaaatatcgaaaacaaggatgatttggacgaccag
gacgaactgaacgccgatttgaaagacggcagaagcgattcggaaatttcggacggctat
gaggatttacagggggcagaccaaaggtttctaaaatctgtggtgaaagagggcaaggag
attcacgtggagcgggatgatcacttccaccatcaccaccaccaccaccactcatttgaa
atcaaagcgccacagccaaacggcgaccaaatgaaactgaaccccgcgtccaccaactcg
cccccgtcagaaaacaacgcggccccagcccagaaaccaaagatttggtcgctggctgag
acagctacaaccccggacaatcctagaaaatctccactaatgaatgggagctctgctggg
cctgctgcccagaccatcatcgctccacacagactcatctcatgccctgttgggaaaatc
cagaactggacaaatcgagctttctcagcccatcagcttgcgttacttaactcaaaccat
tacctcggactggcaaaccaagccacggcgaacggcctagctctgtacagcagacacgcg
gaagagaagagtcataattcagactcagctgttacagaaagatctagtgccttggaagca
gagaaaaagttgttaaaaacagccttccatccagttcaaagacggcctcagaaccaactc
gaagcggcgatggttctatccgcgctctcctcctcgtag
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