Alosa sapidissima (American shad): 121682304
Help
Entry
121682304 CDS
T11137
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121682304 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Other domain-containing proteins
FERM domain-containing proteins
121682304 (frmpd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
PDZ_6
RA_2
FERM_C_FAK1
PDZ_2
FERM_f0
Motif
Other DBs
NCBI-GeneID:
121682304
NCBI-ProteinID:
XP_041918329
LinkDB
All DBs
Position
14
Genome browser
AA seq
1675 aa
AA seq
DB search
MEEGERSRSRSPRRASRVEQVVGRWLRRSRDSLSRERILDGKSERSSSSSQQNFPVKVTV
EIIRDEVLDSHGFSISTKQPLLVRDVIAGGPADGRILPGDQLLKVNNTPVEDLPPDQVQE
MIGDSQESITVTVLRHMSVPKSSLMTAEKRARLRRNPVKVRFAEEVLVNGHTQGNSLLFL
PNVLKVYLENGQTKAFKFDNTTTVKDIILTLKDKLSIRSIEYFSLVLEQQYSITKLLLLH
EEELIQKVVQKKGSHDYRCLLRVCFIPRDPLDLLQDDPVAFEYLFHQSVGDVLQERFAVE
MKCNTALRLAALHIHERLSSCGQTHRASVKSISKEFGLDSFISPTLMRNMREKDLRKALN
YHLKKIQSLLEPRQKVISMDQARLAYLTQMAELISYSGRSYNATMLLQDRESLVSLLVGA
RYGISQVLNHKLNMISTIIDFHYITRVELLSESERVSMLKIYLQDIKPLALLMDSLAAKD
LACLLAGYCRLLVDPNMNVFRWGGRPKMRRIPVEEEYLSRCGSDSDDSSDEDYPMDAQLS
EETHSTQTSNSRGPQDDEDEATGGEEKDSKNGKRGKVRVIVTKAEDEDEENGNMTSKAKA
GSAKGDEEISLETFLETAWYHTDPRVNSSFSSLSSNSLSALEENFRAANRAQAQLDALRE
KSKAASQAASNIDVHSPYLLDIPGQLDPSGGSNTPQRPSKLVYSHEPDLCYADLSQADSL
PSPPEATDDELDDDSQMEDDDGGNRPIPRTLTRWNTQLVTLDDDSLHDSEDTDLSIHAVM
TRGYNREDGQQGSSMTLQEEIFGQIFANEDVSPRRQRPSGFPHVAGTIRDSVSESEDEFF
DAQDRFTPPLTEQEQRDLSNSPRVLNVNHINIRKLMKTAYLNGRQQEDELGEEDRDDGSS
VSSFLQSRSAADSDMDSLSGGSLTSHPTVACLMNDPEEVEHAEPKPTRDHGTAQQGIQHS
HGQCNGDIPGRNTRLSSELLEMEPDTMEFKPVTSTGPPRTSPLITAVRQTQPSQGSTEGT
RNAEKETKQANGIPPPIRPKNHLLLKVPDPVDVPVSGGDTVEKERSPSSVHGRGGRKSPQ
VIYPPPRKEAILTPTSQQPASPSSTPPSSLRELKPASPVQSEGDNKDTSLPSTPNGLTFH
PWEQRNGVTPTPGLSKGVSVSHENLRTEKADAPKMRVGSASTTPTPTPSPMVPVRSPISG
DPSKESVGTTSPGLGTRNGSSGRLSTAALRGRIQDLPWYLTRSQEILGTAALEASSVTEL
KVKEVQNPAEPQPAGPKETKNLPAAAVAKKVKEKGAEVVIAKLKDGPEEVLPFQKETNGK
AGAHPSFVDKNGIYKHLGSCKCEQPQSNRDKHPAAGPDGPPAPVAAPNREPCGCRTVYAN
CFSGDAEDSCGFDDEMTVYEFSRRNPVKKPPPVPPQPVPPATDANCNPSPNVLSLLRDTP
NPLSTSSELSPLLAPPRPLEPRPLELGLLGDPLRSLQGRRYSTGQRGTSLKAAYAALRSD
IDELLVVLEAGMTSASAVALAPPSGQLACCNESAGTNGHSLSDAERCLLQTEARRLASGC
QRATRVGWAPDDALLSLGNSFSALVYLSAACLRVNCTHCGGSHSDIDGKEALGKLQEIVG
LYNEFVAAVETAREGEGVRLLAKQCTVLISTVFSLTQLFRTRTPDTDYGLSHLSF
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggtgagaggagtcggagtcgctctccacggagggccagtagggtggagcag
gtggtgggaagatggctgcgccgctccagagactcgctcagcagggagcggattctggac
gggaaatcggagcgctcgagcagctcgagccagcagaacttcccggtgaaagtgacggtg
gagatcatccgtgatgaggtgctggactctcatggcttcagcatttccacaaagcagccc
ctgctggtcagggatgtcattgcaggaggtccagctgatgggaggatcttacctggagat
caacttctgaaggtgaataacaccccagtagaggatctaccccctgaccaggtccaggag
atgattggggacagtcaggagtcgattactgtcacagtcctgaggcacatgtcagttcca
aaatcttccttgatgacggcggagaagagagcccgcctgaggagaaatccagtgaaagtc
cgctttgctgaggaggtgctggtcaacggacacactcagggaaactctctgctcttcctc
cccaatgtcctgaaagtctacctggagaatggccagaccaaggcctttaagtttgacaac
accaccactgtcaaggacattattttgactctgaaggacaaactgtctatccgttcgatt
gagtacttctcactagtgctggagcaacagtatagcatcaccaaactgctactactgcac
gaggaagaacttatacagaaggtggtgcagaagaaaggttcccatgactaccgctgtctt
ctcagagtctgcttcatccctagagacccgcttgacctactgcaggatgaccctgtggct
tttgaatacctcttccaccagagtgtgggggacgtgctgcaggagcgctttgcggtggag
atgaagtgcaacacggccctcagactggccgctctgcacatccatgagagactgtccagc
tgtggacagacccatagggcatctgtcaaaagcatctctaaggagtttgggctggatagc
ttcatttctccgactctgatgaggaacatgagggagaaggatctgaggaaagcactcaac
taccacctcaagaagatccagtctctgctggagcctcggcagaaggtgatctcaatggac
caggcccgactggcatacctgactcagatggcagaactcatatcctacagtggcaggtcc
tacaatgccaccatgctgcttcaggacagggagtcgctggtgagcttgttggtgggagca
aggtacggcatcagtcaggtactcaaccacaagctcaacatgatctccaccatcatcgac
ttccactacatcacacgggtggagctgctctctgagtcagagagagtcagcatgctcaag
atctaccttcaggatatcaagccgttagcattgctgatggattctttggctgctaaagac
ttggcctgcctgttggcgggttactgtcggctgcttgttgatccaaacatgaacgtattc
cgctggggtggtcgtcctaagatgcggcgcatcccagtcgaagaagaatatttgtctcgt
tgtggcagcgactcggacgactcatccgacgaagactatcccatggatgcgcagctctca
gaagaaacccactccactcagacaagtaatagcagaggtccacaggatgatgaggatgag
gctacggggggagaagaaaaggatagtaagaatggcaagagaggaaaggtgagagtgatt
gtgaccaaggcagaagacgaagatgaggagaacggcaacatgacaagcaaggccaaggca
ggttctgcaaaaggcgacgaagagatatcgctggagactttcctggaaacagcctggtac
cacaccgacccgcgagtcaacagcagcttctctagcttgtcgagcaactcgctgagcgct
ctggaggagaacttcagagcggccaaccgtgcccaagcccagctagatgccttgcgggag
aagagcaaagccgccagccaagccgcctccaacatagacgtccacagcccgtacctcctg
gacattcctggacagctggacccttcaggggggtctaatacaccacagagaccgtccaaa
ctggtttatagtcatgaaccagacttgtgttatgcagacctctctcaagcggactctctt
cccagtccaccagaggccactgatgatgagttggatgacgatagccaaatggaagatgac
gatgggggtaacaggccgataccgaggacactgactcgctggaacacccagcttgtgaca
ttagatgacgacagcttgcacgactcagaggacactgacctgagcatccatgcagttatg
accagaggttacaatcgtgaagacggacagcagggttccagcatgactctccaggaggag
atatttggacagatctttgccaatgaagacgtgtcccctcggagacagaggccatcaggg
ttcccccatgtggctgggactatcagagacagtgtgtcagaatcagaagatgagttcttt
gacgctcaagaccggttcacgccaccattaacagaacaggaacagagagacttgagcaat
tcacccagagtcctgaatgtgaatcacatcaatatcaggaagcttatgaaaacggcttac
ttaaatggcagacagcaggaggacgagctgggagaagaggacagagatgatggttcatca
gtgtcatccttcctccagagccggtccgctgccgattctgacatggactccctgtctgga
ggctctctgacttcccatcccacagtggcctgcctgatgaatgatcctgaggaggtagaa
cacgcagagcccaaaccgacaagggaccatggcaccgcgcaacaggggattcagcactct
catggtcagtgcaatggagacataccaggcagaaacacacggttgtcctcagagctgctg
gaaatggagccggacactatggagttcaaaccggtcacctcgactggtccaccacgtaca
tctccactgatcaccgctgtgcgtcaaacccagccgtcacaaggctccactgaaggtacg
aggaatgcagagaaggagacaaagcaagcgaacgggattcccccacccataaggccaaaa
aatcatctccttttgaaagtccctgatccagttgatgtgccagtttccggaggtgacaca
gtggagaaggagcgctcccccagttcagttcacggaagagggggtcggaagtcgccacag
gtgatataccctccaccaaggaaggaagccatccttaccccaaccagccagcaacctgca
tctccctcatcaacacctccgtcttcccttcgtgagctgaaaccagcttccccagtccaa
tcagagggcgataataaggacacatcactccccagtacccccaatggtctgacctttcac
ccctgggagcagaggaatggggtcaccccaactcctggcttaagcaaaggggtgtcagtg
agccatgaaaacctgcgcacagagaaggcagatgcccccaaaatgagagtgggcagcgcg
tccaccacaccaacgcccactccttccccaatggttcccgtcagaagtccaatcagtgga
gacccctccaaggagtctgtggggacgacttcaccaggcctcggtaccagaaacggatcg
tcgggtcgcctctccacagcagctcttcggggaaggattcaagacctgccctggtacctg
acccgttctcaagagatcctcggtaccgctgcattagaggctagttctgttaccgagcta
aaggtcaaggaggtccaaaacccggctgagcctcagcctgcaggccctaaagaaaccaag
aatctcccagcagctgctgtagcgaaaaaagtcaaagagaaaggtgctgaggtggtcatc
gcaaagttgaaagatggaccagaggaagtgttgccatttcagaaagaaactaatgggaaa
gcaggtgctcatccgagctttgtggataagaatgggatatacaagcatttgggctcttgc
aaatgtgaacagccccagtctaacagagataagcatcctgcagccggtcctgacggtccc
cctgcccctgttgccgctcctaaccgcgagccctgcggctgtcgcacggtttacgctaac
tgctttagcggggatgcagaggatagctgcggatttgatgatgaaatgacagtttacgag
ttctcccgccgaaaccctgtcaagaaacctcctcctgtacctccccagccagtgccccca
gccacggatgccaactgtaacccctctcccaacgtcctgtctctgctaagagacacgcca
aaccccctgtccacctcctcggagctcagccctctcctagcgccgccccggcctctggag
cctcggccgctggagctgggtctgctgggggatcccctgcgctctctgcaaggccgacgc
tacagcaccgggcagcggggcactagcctgaaagcggcatacgccgccctgcggagtgac
atcgacgagctgctggtggtgctcgaggccggcatgacgtcagcgtcagctgtagcgcta
gcacccccatcgggccagctggcatgttgcaatgagtccgccggaactaatgggcactct
ctctccgacgccgagcgctgcctcctgcaaacagaggcccggaggttggcatctgggtgc
cagcgggcaacccgggtagggtgggcacctgacgacgccctcctgtcactaggcaacagc
ttcagtgccctggtgtacctgtctgcagcctgcctgcgtgttaactgcacacactgcggg
ggttcccatagcgacattgacgggaaagaggcactagggaagctgcaggagattgtggga
ctgtacaatgagtttgtcgctgctgtcgagactgcacgagagggagaaggggtcaggttg
ctggccaaacaatgcactgttctcatctccacggtcttctccctcactcagctgttcaga
acgcgcacgccagacacggattacggactctctcacctgagcttctga
DBGET
integrated database retrieval system
