Alosa sapidissima (American shad): 121682344
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Entry
121682344 CDS
T11137
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121682344 (lingo1b)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121682344 (lingo1b)
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NCBI-GeneID:
121682344
NCBI-ProteinID:
XP_041918387
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Position
14:31331760..31350153
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AA seq
623 aa
AA seq
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MTIVQVTSRMVAGEAGGPNYLVACWQPILILMLGTVLSGSATGCPSRCECNGQERSVVCH
RRKLIALPEGIPIETRLLDLSKNRLKTINPEEFISYPHLEELQLNENIISVIEPGAFTNL
YGLRTLGLRNNKLKLIQLGVFTGLSNLTHLDISENKIVILLDYMFQDLYNLKSLEVGDND
LVFISHRAFHGLSGLEQLTIEKCNLTTLPKEALSHVHNLLTLRLRHLNINAIGDYSFRRL
YRLQVLEIVHWPLLDTMTPKSLYGLNITTLSITHCNLTAVPYQAIRHLVYLRTLNLSFNP
IHTIEGNLLHHLLRLQAFHLVGGRLAAIEPYSFRGLNYLKVLNVSSNTLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPACASPEFVQGKEFKDFPDVLPATY
FTCLKSKIRERKAQHKFVDEGTTVNFACQADGDPAPVIIWQTPRKQFITVKTIGRLSVST
DGTLEVRYAQIQDNGTYTCIASNAGGNDTRLAHLHVQSYSPNWPHQPNKTFAFISNQPSE
SGANATRGIVPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKTDAGDSSPTEGPRKINMKMM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgtgcaggtaaccagtaggatggtggctggggaggcaggtgggcccaactac
ctggtggcctgctggcagcccatcctcatcctgatgctgggcaccgtgctctccggctcc
gccaccggctgcccgtcgcgctgcgagtgcaacggccaggagcgctcggttgtctgccac
cgccggaagctgatcgctctccccgagggcatccccatcgagacgcgactgttagacctc
agcaaaaaccgcctgaagaccatcaatcccgaggagtttatcagctacccgcacctggag
gagctgcagctgaatgagaacatcatctccgtcatcgagccgggagccttcaccaatctc
tacggcttgcggacgttgggcctgcgcaacaataagcttaagctcattcagctgggggtc
tttacgggattaagcaacctgacccacctggacatcagcgagaacaagattgtcatcctg
ctggactacatgttccaggacctgtacaacctgaagtcgctggaggtgggcgacaacgac
ctggtcttcatctcccaccgcgccttccacggcctcagtggcctggagcagctgaccatc
gagaagtgcaatctgaccacgctgcccaaagaggccttaagccatgtccacaacctgctg
acgctgaggctgcgccacctcaacatcaacgccatcggggattactcgttccggagactc
tatcggctccaggtgctggagatcgtgcactggcccctcctggacaccatgacccccaag
tccctctacgggctcaacatcactaccttgtcaatcacccactgcaatctcacggctgtc
ccttaccaagctattcgccacctagtgtaccttcgcaccctcaatttgtctttcaatcct
attcatactatcgaggggaacctactgcaccacttgctcaggctccaggcctttcactta
gtagggggcagactggctgcgatcgagccttactccttcagagggcttaactatcttaaa
gttctcaatgtgtcaagcaataccctcagcaccttagaggagtccgcctttcactcggtc
ggcaacctggagactttggcgctccacgacaacccgttggcctgcgactgccgcctgctg
tgggtgttccgccgccgctggaggctcaacttcaatcggcagcagcccgcatgcgcctcg
ccggagtttgtgcaaggcaaggagttcaaggacttccccgacgtgctgccggccacctac
ttcacctgcctcaagtcgaagatccgtgagcgcaaggcccagcacaagttcgtggacgag
ggcaccacggttaatttcgcatgccaggctgacggcgatcccgccccggtgatcatatgg
cagacgccgcggaagcagttcatcaccgtcaaaacgattggtcgactcagcgtctctaca
gacggcaccctggaggtgcgctatgcccaaatccaagacaatggcacgtacacatgcatc
gccagcaacgcggggggaaacgacacccgcctcgcccatttgcatgtgcagagctattcc
cccaactggccccatcagccaaataaaacatttgccttcatctccaatcagcccagcgaa
agtggcgccaatgccacccgaggaatagtgcccttcccgttcgacatgaaaactctgatc
atcgccaccaccatgggatttatctcattcctcggcgtcgtgcttttttgtctcgtcctc
ctcttcctctggagcagagggaaaggcaacgccaagccaaacatcgagattgagtatgta
cctaggaagacagatgcgggcgatagcagcccaaccgaggggccccgtaaaatcaatatg
aaaatgatgtaa
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