Alosa sapidissima (American shad): 121682434
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Entry
121682434 CDS
T11137
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121682434 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
121682434
NCBI-ProteinID:
XP_041918505
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All DBs
Position
14:complement(12114401..12142168)
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AA seq
1850 aa
AA seq
DB search
MDPSGSELDSSLPQPENPCLIVEDSQPDSLAPEDDPESSYRALLAKRLSNLQPHAPSPVL
ELISSPPRDRLSQKESQASGNHNNHSVSQEPDQSLEVQESSPVFDIVTSGDPKSRSDMED
VDSGADSTTCAQTEESMSQFGLLELSESQGFRDQPQKSESMSQFGLLELSESQGFRDQPQ
KSDNTKTTGRNSQNQDLRRSEVSSSSRESQRLSIQALLHSQATEDEDMVSSQEDMFEGEE
GRAGTCVDSTVNEPVNCCMPTSTPANSLHLLHLSGQGTLVQESLSQQSVDFVAATQERMS
QTPLIVPSSPTGDEPMDISKTEDNQSQRGEKPKGSSAVLKPRPTSTPVSQNSPGFVLDKS
LSLPSQPEFSHDIFVATPSLDQPTVKADGASSSQTQNSPTAVKTLPTKPSPTSSPRNTPA
AASPKHTSKGAQAAQSSSSQAPEVGVSFQLELSSTSQPSILFQKTQSFLEDADEDSQATQ
IEEMATEGAMGVDTSDAGPSRAATAASQSSASGGGVGTCGVRPGAGVVGREISRSQPDPH
SRPASHNVNVGRALSQGSATLDRAKPSGGGVSQLGRVESSAAAKPSPSPDDLGVVPPSLP
SQSLSQSMLSVHSATRPVPDSQRSQPKSQSQSQASSQAASQRLTQHSQPPRSQGSGHSQG
KERNVPALEEMVETDKLREEENENESVVGTGPGASLGLCLALSQSQNFDPEPMEEDQDQL
ETQQLVPGPQHTKAAQASSASPSSPQKSQKVSQQQQKEKDKDRTVTASQPTPGLCSPERR
RKELEKSLSPGKGSLSQPERGSRADPGPHRSQSQGLSDSSGDIPFHFTLPKEGELIRPVV
TATPPLISQLKKTPRHSTPIEMTSFSEASEGDVTRETSMADSEIMAEESAEEPPTTAEAS
GKLSLRMKLVTPVEEGSSGSERFSLQKPPLSDDDGSVVKATTVAKAVASPSVFSRVREVH
RQEEAEEEVQPSTLSAPLSGGLFNSSQRLGGDSQDSESRPRPLITSTQNSQEAHQSQPLS
PAPQRSTVGNGTLGRLSQQANGAASESPVKHAPTGTPQGDAGQSAQVGGAELTPPRTPLR
QRAVSQQTSFEVPASTSNTPNKSHLRAVSQQTSFDAAGAHNSSGRGLPELSPPRPPPGVR
MRRHVRTTQEVRTTVTRIITDVYYEDGREVDRKVTEESEEPVVDCRVLESDLSPSRTGSS
MTSGDLADISSLSSKASSLTHSSSGSMGAAAGAGTSAGRHPDFIMPTGRGAGRSGSPRRG
RKQLQRPVSEQARVQGSRPLTPVTPRGRSRRGRPPSRSPQSRGGRAGANNVQRGPFSSPE
EEEERFTRVTSRGRAATPPPGPSARAGGASSDSSLVGLRVVAKWSSNGYFYSGRITSDLG
AGRFRLLFDDGYECEVQGRDVLLCDPIPTETEVTAISEDEYFLTGVVKNHKTVGRELQYC
VEREGQQQWYSRASVILSMEQGSQLREHYGLDPSEPLTPLTKAADISLDNLVDGKRRRRG
NTGPGVNTPSRSGSDSPRTPGPSGKRKLMSSTEEERAERTPAKRGRKSGPNKAGSRAAAG
TAVGNTSGSDAGDHLASHVCAGARAGAGTGVCNTSGSGTDVPSDPSDLLASHGPLPTSDS
LFMGFAFLLTTSSVNDRLSNLATSDEEEDYLPTAPYNKHYIVSQLEAGGGLVLPDFNEEQ
CKAAYQSLLIADQHCRTRKYLLCVASGVPCVSNAWVRDSCLEQKLLNYRNYLLPAGMGPS
QRVVEWHPRCSPFKSLRVLLVFAGSADLWGELLKLSGASSVKQQKGEDTDIPADTFDVMV
TERSCPSAVVKRASSRSLPVVSLEWLVQSLIVGERQDYASDPQYRHDYDL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagtggcagcgagctggactccagtctcccgcagcccgagaacccgtgcctg
atcgtagaggactcgcaacctgatagcctagcgccagaggacgaccccgagagcagctac
cgcgctctgctcgccaaacgcctgtccaacctacagccgcacgccccgagtcccgtcctg
gagctgatttcctcccctccccgagaccgactttcccagaaggagagccaagccagtggg
aaccacaacaaccactccgtctcccaagagccagaccaaagcttggaggtccaagaaagt
agtccagtatttgacattgtcacatcaggtgacccaaaaagcaggtctgatatggaggat
gtggattcaggagcagactccaccacttgtgctcagactgaagagagcatgtctcagttt
gggttgctggagctgtcggagagccagggatttcgggaccagccgcagaagagtgagagc
atgtctcagtttgggttgctggagctgtcggagagccagggatttcgggaccagccgcag
aagagtgacaacaccaagacaacaggaaggaactcccaaaaccaggatttgagaaggtct
gaggtgagctccagcagtagggagagtcagaggctgagtatccaggccctgctgcactct
caggctacagaggatgaggacatggtgtcatcgcaggaggacatgtttgaaggggaggag
gggagagctgggacatgtgttgacagcacagtgaatgaaccggtcaactgctgcatgccc
acctccaccccagccaacagcctccacctcctccacctgtctggccaaggcactctggtg
caggagagcctctcccaacagtctgtggattttgtggcggccacacaggagaggatgagc
cagacgcccctcatcgtgcccagctctcccactggagatgaaccaatggatatctccaaa
accgaagataaccaatcacaaagaggagagaagcccaaaggcagcagtgctgttctcaag
ccacgccccacttccaccccagtatcccagaattctcctggttttgtgttggacaagagt
ttatctctgcccagccaacctgagttttctcatgacatattcgtggccacccctagtctg
gatcagccgactgttaaagccgacggggcgtcgtcctctcagacccagaactcccctaca
gctgtgaagaccctgcccactaaaccgagccccacgtcttctcctcgcaacacacctgct
gctgcttcgcccaagcacacgtccaaaggggcccaggcagcccagtccagctcctcccag
gccccagaggtgggagtgtccttccagctggagctgtcctccaccagccagcccagcatc
ctcttccagaagactcagagcttcctggaggacgcggacgaggacagccaggccacgcag
atagaggagatggcaactgagggggcgatgggggtggacaccagtgatgctggtccaagc
cgtgctgctactgctgctagccagtctagtgcctccggtgggggagtagggacgtgcggt
gtgagacccggtgctggggtggtagggagggagatctccaggtctcagcctgatccgcac
tccaggcctgcctctcacaatgtgaatgtaggccgtgccctgagccagggctcggcgacc
ctggaccgtgccaaaccctccggtggtggtgtctcccagctgggccgagtggagagctct
gccgccgccaagccttctcccagccctgacgatttaggggtggtgcctcctagcttgcct
tcccagtcgctctcgcagtccatgctgtctgttcactctgccacacggcctgtccctgac
agccagagatcccagcccaagtcccagtctcagtcccaggccagcagccaggcagcatcc
cagagactgacccagcacagccaacctccgaggtcccagggctccggccacagccaaggc
aaagagagaaacgtgcctgcgctggaggagatggtagagacggataaactaagggaggag
gagaatgagaacgagagtgtggttggaaccgggcctggagcctcactgggactctgcctg
gctctctcccagagtcagaactttgacccagagcccatggaggaggaccaggaccagctg
gagactcagcagctggtgcccggtcctcagcacaccaaagcggcccaagccagctctgcg
agtccctctagtccacagaagagccagaaggtgagccagcagcagcagaaggagaaggac
aaagacaggacggtgaccgcatcacagcccactcccggcctctgcagcccagagcgaagg
aggaaggagctggagaagagcctctccccggggaagggctctctctctcagcctgagagg
ggttccagagcagacccagggccgcaccgctcccagtcccagggcctgagcgacagctcc
ggggatattcccttccactttacactacctaaagagggggagctcatccggcctgttgtc
acggcgactcccccgctcatctcccagctgaagaagacgcccaggcacagcactcccatt
gagatgacctcattctctgaggcgtcagaaggggacgtcaccagggagacctccatggcg
gacagcgagatcatggctgaggagagcgcggaggagccgcccaccaccgccgaggcctct
gggaaactgagtctgcgcatgaagctggtgaccccagtggaggaggggagttcggggtcg
gagcgcttcagtctgcagaaacccccattatcagatgatgatggctctgttgtcaaggct
accactgttgccaaggcagtagctagtccgtctgtgttcagtcgtgtccgtgaggtccac
cggcaggaggaggctgaagaggaggtccagcccagcactctctctgctcctctcagtgga
ggtttgtttaactcttcccagaggctgggcggagactctcaggactcagagtcgagacca
cgccccctgattaccagcacccagaacagccaggaagcccaccaatcgcagcccctctct
cccgcgccacagaggagcaccgtgggtaatggaaccctgggacggctctcccagcaggcc
aatggggctgcgtccgagagtccagttaagcacgctccgactgggacgccacagggagac
gctggccaatcagcacaggtgggcggggcagagctgaccccgcccagaactccccttaga
cagcgggcggtgtcccagcagactagctttgaggtacctgcctctaccagcaacactccc
aataagtctcacctgagggctgtctcccagcagaccagctttgatgcagcaggagcacac
aactcatctggcagagggttaccagagctgtcccctcctcgtccccctccgggagtacgc
atgcgcaggcatgtgcgcaccacccaggaagtgcgaactacagtcacgcgcatcatcaca
gacgtgtactacgaggacgggcgtgaggtggaccgcaaggtcacagaggagtcagaggag
cctgtggttgactgccgtgtgctggaaagtgacctctcgccctcacgtaccggcagctcc
atgacctccggtgacctggcggacatcagctcgctctcgtccaaagcgtccagcctgacc
cacagcagctcgggcagcatgggtgcggctgcaggggcgggcaccagtgctggccgacac
cctgacttcatcatgcccacgggccgcggggctggcaggtcggggagccccaggaggggg
cgcaagcagctgcagaggcctgtctctgagcaggccagagtgcaggggtcgcgccctttg
accccggtcacacctcgtggccggtcacggcgaggcagacccccctcacgcagccctcag
agcaggggtggtcgggccggagccaacaacgtccagcgaggaccattctcctctccagag
gaggaggaggagcgcttcacccgtgtcacctctagagggcgtgctgcaacaccccctcca
ggaccctccgcccgcgctgggggagcctcgtccgacagcagcctggtgggcctgcgggtg
gtggccaagtggtcctccaacggctacttctactcgggccgcatcaccagtgacctgggc
gccggaaggttccggctgctcttcgacgacggctacgagtgtgaggtgcagggccgtgac
gtgctgctgtgtgaccccatccctacggagacagaggtcaccgcaatatctgaggatgaa
tacttcctcactggtgtggttaaaaaccataagacggtgggcagggagctgcagtactgt
gtggaacgggagggccaacagcagtggtacagcagggcctctgtcatcctctccatggag
cagggcagccagctacgcgagcactatggcctcgacccctccgagcccctcacccccctc
accaaagcggccgacatcagtctggataatctggtggatgggaagcgccgtcgccgtggc
aacacggggccaggagtgaacaccccaagtcggagcggcagcgacagcccacggaccccc
gggccttctgggaagaggaagctgatgagctccactgaggaggagcgtgcagagcggaca
cccgccaaaagggggcgcaagtctggccccaacaaagccggttcgcgtgctgctgcaggt
acggctgtgggcaacacctcgggaagtgatgctggtgaccacctggccagccacgtgtgt
gcaggtgcacgtgccggtgcaggtacgggcgtgtgcaacacctcgggcagcggcacagac
gtgccctctgaccccagtgacctgctggcgagccacgggccgctccctaccagcgactcc
ctgttcatgggcttcgccttcctgctcacgacctcctcggtcaacgaccgcctctccaac
ctggccaccagcgacgaggaggaagactacctgccgaccgctccctataacaagcactac
atcgtcagccagctggaggcgggagggggcctcgtcctgcccgacttcaacgaggagcag
tgtaaagcagcctatcagagcctgctgatcgcggatcagcactgccggaccaggaagtac
ctgctgtgtgtggcgagtggtgtgccgtgcgtgtccaacgcctgggtgcgggacagttgt
ctggagcagaagctgctcaactacaggaactacctgctgcccgctggcatgggacccagc
cagcgcgtcgtagagtggcatccacgctgcagcccgtttaagagcctgagggtcctgctg
gtgttcgcgggctcggcagacctgtggggggagttgctgaagctgagtggagcgagtagc
gtgaagcagcagaaaggagaggacaccgacattccagccgacacgtttgatgtgatggtg
actgagcggtcctgcccctctgcggtggtgaagcgtgcgagctcccgctccttgccagtg
gtctccctggagtggcttgtccagagcctgattgttggagaacgccaggactacgccagt
gatccccagtatcgccatgactacgacctatga
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