Alosa sapidissima (American shad): 121682461
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Entry
121682461 CDS
T11137
Symbol
spi1b
Name
(RefSeq) transcription factor PU.1b
KO
K09438
transcription factor PU.1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121682461 (spi1b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
121682461 (spi1b)
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Gene cluster
GFIT
Motif
Pfam:
Ets
Motif
Other DBs
NCBI-GeneID:
121682461
NCBI-ProteinID:
XP_041918557
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Position
14:11834730..11845418
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AA seq
267 aa
AA seq
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MLHSYRMEGYLTSHQAAEEMIYDSDIYRPPIEYYPYINIDEGQTDHVWDYPHHAHGSDFE
NIPDTHFTELQSVQPVHIPSLHPRFEPEPSHPLDPSLVGHPHHLALSPQVQYFRPQLCYP
QTSPIQRISDDDDPGSRSPPLEVSDEEGLREHISSTTGGEPGNKKKIRLYQFLLDLLRNG
DMKESIWWVDRDKGTFQFSSKHKEALANRWGTQKGNRKKMTYQKMARALRNYGKTGEVKK
IKKKLTYQFSGEVLGKGHLGIERKMYL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgttacattcatacaggatggaggggtatcttacctcacatcaagcagctgaagaaatg
atctatgactctgacatctaccgaccgccgatagagtactacccatacatcaacatagat
gaaggccaaacagaccacgtctgggactacccgcaccacgcccatggcagtgactttgag
aacattccagatactcacttcacagaactgcagagtgtgcagcccgtgcacatcccgagt
ctgcacccgcgcttcgagcccgagcccagccatcctctggaccccagcctggtggggcac
ccacaccacctggccctctctcctcaggtgcagtatttccgacctcaactctgctatccc
cagacatcgccaatccagcgcatctccgacgacgatgaccccggaagccgcagtcctcca
ctggaagtgtctgatgaggagggcctgagagagcacatcagctccactactggtggagag
ccaggcaacaagaagaagatccgtctatatcagtttctcctagacctcttgcgaaacggg
gacatgaaggagagcatctggtgggtggatcgggacaagggcacattccagttctcctcc
aaacacaaggaggcgctagcgaaccgctggggcactcagaagggcaaccgcaagaagatg
acctaccagaagatggcaagggcactgcgcaactatggcaagacgggcgaggtcaaaaag
atcaagaagaagctgacataccagtttagtggagaagtgctggggaagggccacctcgga
attgaaaggaagatgtacttgtag
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