Alosa sapidissima (American shad): 121683205
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Entry
121683205 CDS
T11137
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121683205 (smc4)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121683205 (smc4)
Condensin II
121683205 (smc4)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
TPR_MLP1_2
AAA_29
ERM_helical
THOC7
Motif
Other DBs
NCBI-GeneID:
121683205
NCBI-ProteinID:
XP_041918668
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Position
15:complement(31500366..31539353)
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AA seq
1295 aa
AA seq
DB search
MPAKTTKVSAAKPRGKGSQPLDDSDEELDLPPQEVNSNGQEPPLTNDAVPGEPAEAVDDR
SLEEILGSIPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNG
SGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKLKDVQSCTVEVHFQKIIDKEGDDFE
VIPNSKFYVSRTAGKDNSSTYHVNGKKATFKDVGILLRSHGIDLDHNRFLILQGEVEQIA
MMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTLCQRVEQLNEQRGEKLNRVKMVEKEKN
ALEGEKNTAVEFLQLENEIFKKRSQLCQYYIHDLQKRVVEHEVEKRQIQDDTKELTEKNN
KLSEEMKGKTQDLKNVEKKLGKVTKYIENQKEKFTQLDLQDVEVREKLKHCKSKTKKLDK
QLQKDQEKLEEVRNIPASSEKIITEATNRKGQLEGQKVVEEEKLAQVMESLKEETKGLQQ
DKETKERELMELSKEVNETRSRMDVAQSELDIYLSQHKSVLTQLNQAKDTLQGATDTLKE
RKAAIKDLEVKIPQCEQQLKKDEQELEQVSQADGQVQEVLRDMRQKVEEAKSSLSSTRSR
GKVLQALMQQRRSGQIPGILGRLGDLGAIDEKYDIAISSSCGALDNILVDTIDTAQKCVT
FLKAQNIGVATFIGLDKMKVWERSMGAISTPESIPRLFDMVKVKDEAVRPAFYFALRDTL
VARDLEQATKVAFQKDKRWRVVTMQGQIIEQAGTMTGGGSRVMRGKMGSSIGSEISQKEL
DGMESTLREKQRQRQDYQQQRQQLEEKVHRQRQQLRDMKNTLEKYTASIQGLAEQEVHLK
SQIKKLEASVVAAAPDKAKQKQMEKNLDSFKKDFEAASSKAGKVEAEVKRLHTLIVDINS
HKLKAQQDKLDQVNKGLDECTSAITKAQVAIKTAGRNLKKSEETVAKVEQEVEENKKTME
ELTEQLKQLEEQAGEIMKACQEAEEALPEVQEQHKSVLQEIKVLQEQEHALQKESLNVRL
KVEQIDTAISENNNKIKHWQKEATKLSLHPIDDKPAEELLPLTAEELEAIRSSDVLKNAI
ALLEDRCAHMKPNLGAIAEFKKKEELYLQRVSELDDITTLRDDFKRGYEELRKQRLHEFM
AGFNIITNKLKENYQMLTQGGDAELELVDSLDPFSEGINFSVRPPKKSWKKIYNLSGGEK
TLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMF
EIADRLIGIYKTYNTTKSVPINPKTISLQEVVSSA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccagctaaaacgactaaagtatcggccgcgaagccacgagggaaagggtcgcagcct
ctggatgattcggatgaggagttggacttaccccctcaagaagtgaactccaatggtcag
gagccaccactcacaaatgatgccgttcccggggagcctgccgaggctgttgatgatcga
agtttggaggagattctcggtagcatccctccacccccgcccccagcgatgaccaatgag
ccgggcgctcctcgcctgatgataacgcatattgttaataggaattttaagtcgtacgca
ggcgaacagattctcgggccctttcacaagcggttctcctgcatcattggtcccaacggc
agtgggaaatccaacgtgatcgattccatgctatttgtgtttgggtacagggctcaaaaa
atcaggtccaaaaagctctctgtgctcatccacagctcagacaagctcaaggatgtgcag
agctgtacagtggaggtgcactttcaaaaaattattgataaggaaggagatgacttcgaa
gtcatccccaacagcaagttctatgtttcaagaactgctggcaaagacaattcctccacc
taccacgtcaatggcaaaaaagccaccttcaaagacgtgggcatattgctgcgcagtcat
ggaattgatctggaccacaacaggtttttgattttacagggcgaggtggagcagatcgcc
atgatgaagcccaagggtcagacggagcacgacgagggtatgcttgagtatctggaggac
atcatcggctcctgccggctcaagcagcccattcacaccctgtgccaacgtgtggagcag
ctcaacgagcagagaggagagaagctgaaccgggtgaagatggtggagaaggagaagaac
gcgctggagggggagaagaacacagcggtggagttcctccagctggagaacgagatcttc
aagaagaggagccagctctgccagtactatatccatgacctacagaaacgtgtggtggag
cacgaagtggaaaagcggcagatccaggacgacaccaaggagctgacggagaaaaacaac
aagctgtccgaggagatgaaagggaagacccaagacctgaaaaatgtggagaagaagctg
gggaaggtgaccaagtacatcgagaaccagaaggagaagttcacccagctggacctgcag
gacgtagaggtgcgcgagaagctcaagcactgcaagagcaagaccaagaagctggacaag
cagctgcagaaggaccaggagaagctggaggaggtgaggaacatcccggccagcagtgag
aagatcatcacggaggccacgaacaggaaggggcagctggagggtcagaaggtggtggag
gaggagaagctggcccaggtgatggagagcctgaaggaggagaccaagggcctgcagcag
gacaaagagacgaaagagcgggagctgatggagttgagtaaggaggtgaacgagacacgc
tcccgcatggacgtggcccagtcggagctggacatctacctgagccagcacaagagcgtg
ctcacgcagctcaaccaggccaaggacacgctgcagggcgccacagacaccctcaaggag
aggaaggccgccatcaaggacctggaggtcaaaatcccacagtgcgagcagcaactcaag
aaggatgagcaggagctggagcaggtgagccaggctgacgggcaggtgcaggaggtgctg
cgggacatgcggcagaaggtggaggaggccaagagctccctgtcctccacccgcagccgc
ggcaaggtgctccaggcactcatgcagcagaggaggagtgggcagatccctggcatcctt
ggacgcctgggtgacttgggggccatcgatgagaagtacgacatcgccatctcctccagc
tgtggggctctggacaacatcctggtggacaccatcgacacggcgcagaagtgtgttact
ttcctcaaagcgcagaatatcggagtggccaccttcataggcctggacaagatgaaggtg
tgggagcggagcatgggcgccatctccaccccggagagcatcccgcgcctgttcgacatg
gtgaaggtgaaggacgaggcggtgcgtccggcgttctacttcgccctgagggacacgctg
gtcgccagagacctggagcaggccaccaaggtcgccttccagaaggacaagcgctggagg
gtcgtcaccatgcagggacagatcatcgagcaggccggtaccatgactggaggaggcagc
cgggtgatgaggggcaagatgggctcctccatcggctcagagatcagccaaaaggagctg
gacggcatggagagcactctgcgggagaagcagaggcagaggcaggactatcagcagcag
aggcagcagctggaggagaaggtgcatcgccagagacagcagctcagagacatgaagaac
actctggagaagtacaccgccagcatccagggtctggctgagcaggaggttcacctcaag
tcccagatcaagaagctggaggctagtgtcgtcgccgctgcacctgacaaggccaagcag
aaacagatggagaagaacctggactccttcaaaaaagactttgaggcggcgtccagcaag
gcagggaaggtggaggcagaggtgaagcgcctacacaccctcatcgtggacatcaacagc
cacaagctgaaggcccagcaggacaagctggaccaggtcaacaaggggctggacgagtgc
acctccgccatcaccaaggcccaggtggccatcaagaccgccggacgtaatctaaagaag
tctgaggaaacggtggccaaggtggagcaggaggtggaggagaacaagaagaccatggag
gagctgacggagcagctgaaacagctggaggagcaggcaggggagatcatgaaggcctgc
caggaggccgaggaggcgctgccagaggtgcaagagcagcacaagtcggtgctgcaggag
atcaaggtgctgcaggagcaggagcatgcgctgcagaaggagtccctcaacgtgcgcctc
aaagtggagcagatcgacacggccatctccgagaacaacaacaagatcaaacactggcag
aaagaggccaccaagctgtctctgcaccctattgatgacaagccagcggaggagctgctg
ccgctgacggccgaggagctggaggccatcagaagctctgacgtactcaagaacgccatc
gccctgctggaggaccgctgcgcccacatgaagcccaacctgggtgccatcgcagagttc
aagaagaaggaggagctgtatctgcagcgggtgtctgagctggacgacatcaccacgctg
agggacgacttcaagcgcggctacgaggagctgcgcaagcagcggctgcacgagttcatg
gccggcttcaacataatcaccaacaagctgaaggagaactaccagatgctgacacagggg
ggcgacgcagagctggagctcgttgacagcctggaccccttctccgaaggcatcaacttc
agtgtgcggcccccgaagaagagctggaagaagatctacaacctgtcgggcggagagaag
actctgagctcgctggcgctggtcttcgccctgcaccacttcaagcccacgccactctac
ttcatggatgagattgacgccgccctcgacttcaaaaacgtctccatcgtggcctgctac
atctatgagcaaaccaagaatgcccagttcatcatcatctccctgaggaacaacatgttt
gagatcgcagaccgcctgatcggcatctacaaaacctacaacaccaccaagagtgtcccc
atcaaccccaagaccatcagtctgcaggaggtggtgtcctctgcctga
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