Alosa sapidissima (American shad): 121683270
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Entry
121683270 CDS
T11137
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121683270 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asad01001
]
121683270 (limk1a)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121683270 (limk1a)
Protein kinases [BR:
asad01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
121683270 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RelB-like
ABC1
RIO1
PDZ_2
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
121683270
NCBI-ProteinID:
XP_041918757
LinkDB
All DBs
Position
15:22518613..22564297
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AA seq
679 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGGSLPVCAGCHQRIYDEQYLQALNTDWHTVCFRCCECSTS
LSHWYYEKDGRLFCKKDYWAKFGELCHGCTEPITTGLIMVAGEQKYHPECFTCLNCRSFI
GDGDTYALVERSKLYCGHCYYQTIVTPVTLPDSPCSKIPHTVTLVSIPASTDGKRGFSVA
IDQSTSPNGFGPDHNPTVRVSEVDTECISPDVKNSIHVGDRILEINGTPIRNVPFDEIDL
LIQETSRLLQLTIEHDPHDRGGSEDQVDRPSPLSPVSSPVSPITQPPNQDVNNLRSRVIT
RSYSIDKSPCSSNTASPLSQRKDINRSESLRVVSNHTHRIFRPSDLIHGEVLGKGCFGQA
IKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIA
EYIKGGTLREIIKKMDSNFPWNQRVSFAKDIASGMTYLHSMNIIHRDLNSHNCLVRENNS
VVVADFGLARLMVEDKNQDKLSLGNPQGLKKPDRRKRYTVVGNPYWMAPEMIHGKSYDEK
VDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVKGFLEHFCPSDCPPAFFPIAAICCDL
DAEKRPAFTKLEEWLENLKMHLDIRLPLVSELEQLSRDFWQKHPASENGLRPHPEQPESA
HSLALSARLRGEDEEQNGA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgcttctctgttgtacctggaaggacgaacgcatgggagaggaggaagct
ggtgggagtttgcctgtgtgtgcgggatgccaccagcgcatctacgatgagcagtacctc
caggccctcaacaccgactggcacaccgtttgcttcaggtgttgtgaatgcagcacctcc
ctgtcccattggtactacgagaaggatgggcggctcttctgcaagaaggactactgggcc
aagttcggcgagctgtgtcacggatgcacggagcccatcaccactggcctgatcatggtt
gcgggagagcagaagtatcaccccgagtgtttcacctgcctgaactgtcggagtttcatt
ggagatggggacacgtatgccctcgtggaaaggtccaagctctactgtggccattgctac
taccagaccatcgtcaccccggtgacactcccggactcaccgtgctcgaagatcccccac
acagtgacccttgtgtccatcccggcatccaccgatggcaagcgtggcttttccgttgcc
atcgaccagagcaccagtcctaatggcttcggccctgaccacaaccccacagtgagggtg
tcagaagtggacacagagtgcatcagtcctgatgtgaagaactccatacatgtaggtgac
agaatccttgagatcaacgggacgccaatccggaatgttccttttgatgagattgacctg
ctgatccaggagacaagtcgtctgctgcagctgaccattgagcacgacccccatgaccgt
ggcggctcggaggaccaggtggacaggccgagccccctgtctccagtgtccagtccggtg
tccccaatcacccagccccccaaccaggacgtcaacaacctccgctcccgcgtgatcacg
cgcagttacagcattgacaaatcaccctgctccagcaacaccgcttcacccttgtcccaa
cgcaaagacatcaaccgctcagaatccctgcgtgtggtgtccaatcacacgcaccggatc
ttccgcccctctgacctcatacatggagaggtcctggggaagggctgcttcggtcaagcc
atcaaggtgacccaccgagagacgggcgaggtgatggtgatgaaggagctgatccgcttc
gacgacgagacgcagaggaccttcctcaaggaggtgaaggtgatgcgctgcctggaacac
cccaacgtgctcaagttcatcggcgtgctctataaagacaaacgactcaacttcatcgcc
gagtacatcaaaggaggaaccctgagggaaatcattaagaaaatggatagcaactttcca
tggaaccagcgagtgagttttgcaaaggacattgcttcaggcatgacctacctgcattcc
atgaacataatccacagagacctgaattctcacaactgccttgtacgagaaaataacagt
gtggtggtggcagacttcgggcttgctaggctcatggtggaggacaagaaccaggacaag
ctgtctctggggaacccgcagggtctgaagaaacctgaccgtcggaagaggtacacggtc
gtgggcaacccctactggatggcaccagagatgattcatggaaagagttacgacgagaaa
gtcgacatcttctcctttgggattatgctttgtgagatcatcgggcgagtcaacgcagac
ccagactatctcccccgggcgatggacttcgggctgaacgtgaagggcttcctggagcac
ttctgcccgtcggactgcccgcccgctttcttccccatcgctgctatatgctgtgacctg
gacgcagagaaaaggccggcgtttactaagctggaggagtggctggagaacttgaagatg
cacctggacatccggctgccgctcgtctccgagctggagcagctcagccgggacttctgg
cagaagcacccggcctccgagaatgggctgcgcccgcaccccgagcaaccagagtcggct
cactcgctcgcgctctcggcgagactaagaggagaggatgaggagcagaacggagcgtag
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