Alosa sapidissima (American shad): 121683339
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Entry
121683339 CDS
T11137
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
asad03110
]
121683339 (clpb)
Chaperones and folding catalysts [BR:
asad03110
]
Heat shock proteins
HSP100
121683339 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
Ank_4
ClpB_D2-small
AAA_5
AAA
Zeta_toxin
AAA_22
Sigma54_activat
Torsin
AAA_16
AAA_24
nSTAND3
AAA_3
YchF-GTPase_C
RNA_helicase
NACHT
ABC_tran
ATPase_2
RuvB_N
Motif
Other DBs
NCBI-GeneID:
121683339
NCBI-ProteinID:
XP_041918888
LinkDB
All DBs
Position
15:33904524..33952717
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AA seq
676 aa
AA seq
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MLLSSVPKRMLMRRSRSLSPCRALQTTGADSSCTTGRQGLREAVDANRNPLVSTSRVSRK
GILSEEASSANVTPHMQYHHLATRWLNNLQGRRSSWAALASRGREQNYWEGAGGRESRSS
GATSAGVLSAAAIAFCLKKDSSSKGDTLLQAARTSSSQEVIRLLAEGADVNHRHKLGWTP
LMVAAMNRQHNVVKVLLEKGADPNLGDDFSSVYEISREKSIHSLEVLVTREDEFSSRLSS
RANFRGCTPLHYAVLADDLATVRMLLEAGADPLRPNSQGHTPAQYAKEGPLQELLKEWEG
KCVEARQQREAEERRRFPLERRLKEHMIGQEGAINTVAAAIRRKENGWYDEEHPLVFLFL
GSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEDGGQLT
KRLRDCPNAVILFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKGAVFIMTSNVASE
DIAQHALGLRREAQEQSRRRLADNLEEVQKSSQITISKQFKEEVIRPILKAHFRRDEFLG
RISEIVYFLPFCHAELIQLVNKELNFWAKKAKQRHNITLLWDPPVLDLLAGGYNVHYGAR
SIKHEVERCVVNQLAAAYEQELLPKGCTLRLSVETGLEEQGGAEPTLRLEVVGDDSSTHT
LEIRPPLNPEQTGYAH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtcatctgtgcccaagcgcatgctgatgcgaaggtcgcgcagcctgtcgccc
tgtcgggcgcttcaaacgaccggagccgactcgtcttgcaccacaggacgccagggcttg
cgcgaggcagtggatgccaatcggaatccccttgtgtccacgtctagagtgtcgaggaag
ggcattttgagcgaggaggctagctcggcgaatgtgaccccgcacatgcagtaccaccac
ctcgccacgcggtggctgaacaacctacagggccgccggagctcgtgggccgcgctcgcc
agcagggggcgcgagcagaactactgggaaggagcgggcggcagggagagtcgctcgtcc
ggggccacgagcgcaggcgtgctgtcggccgctgccatcgccttttgcctgaagaaagac
tcgagctccaaaggtgatacacttctgcaggctgcaaggaccagtagttctcaggaagtt
atcaggttactggcggagggtgcggatgttaaccatcggcacaagctgggctggacacct
ctcatggtggctgcaatgaacagacaacacaatgtggtgaaggttctgttggagaagggg
gcggaccctaacctgggtgatgacttcagcagtgtgtatgaaatctcccgggagaagagc
atccattctctggaggtgctggtgacgcgtgaggatgagttcagcagtcgtctgagctcc
agggccaacttcagaggctgcacccccctccactacgccgtgctggcagacgacctcgcc
actgtacgcatgctgctggaggcaggtgccgaccccctgcggcccaatagccaggggcac
acgcctgcgcagtacgccaaagagggaccactgcaggagctgctcaaggagtgggagggc
aagtgtgtggaggctcggcagcagagggaggcagaggagaggaggcggttccctctggag
cgacggctgaaggagcatatgattggccaggagggagccatcaacactgtggcggcagcg
atcaggaggaaggagaatgggtggtacgatgaagagcatccattggtatttctcttcctc
gggtcctctggcattggtaaaacagaactggcaaagcaggtggctcgatacatgcacaaa
gacatcaagaagggttttatacggatggacatgtccgaattccaggaaaaacatgaggtg
gctaagttcatcggctctcctccggggtacgtgggccatgaagacggagggcagctgacc
aagcggctgcgcgactgccccaacgccgtcatcctgtttgacgaggtggacaaggcccac
ccggacgtcctcaccattatgctccagctcttcgacgaggggaggcttactgatgggaaa
gggaagactattgagtgtaagggcgcagtgttcatcatgacgtctaacgtggccagtgag
gatattgcccagcatgctttgggcctgcggagagaagctcaggagcagagccgtcgacgc
ctggctgacaacctggaagaggttcagaaaagcagtcaaatcaccatatccaaacagttt
aaagaagaggtcatacgtcccattctgaaggctcatttccgtagagacgagtttctaggg
cggatcagtgagattgtttacttcctgcctttctgccatgctgagctcattcagctcgtc
aacaaggagctcaacttctgggccaagaaggcgaagcaaaggcacaacatcacactgctg
tgggatccgccagtcttggacctcttggcagggggctacaacgtgcactacggggctcgc
tccatcaaacacgaggtggagcgctgtgttgttaaccagctggccgccgcctatgagcag
gagctcctccctaaaggctgcacgctccgcctctctgttgagacgggattggaggagcag
ggaggggcggagccaacgctgcgactggaggtggtaggagatgacagctcaacacacacg
ctggagatacgaccccccctcaacccagaacagacgggctacgcccactaa
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