Alosa sapidissima (American shad): 121683364
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Entry
121683364 CDS
T11137
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03440
Homologous recombination
asad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121683364 (brca2)
03460 Fanconi anemia pathway
121683364 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121683364 (brca2)
03036 Chromosome and associated proteins [BR:
asad03036
]
121683364 (brca2)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121683364 (brca2)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121683364 (brca2)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121683364 (brca2)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121683364 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
121683364 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121683364
NCBI-ProteinID:
XP_041918911
LinkDB
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Position
15:2248043..2296856
Genome browser
AA seq
2734 aa
AA seq
DB search
MFEACIWDTKTDLGPLAPNWFEELTVKASRKDETDVGESMATGPSSHDIAFKPPGIKAEM
FLASQTSTPKLLHKPPLASPEFLTKGTPASAQVLLLKESSLCPFGSEKESGPFNHQRSTE
LKIVHEQVETPKRFSSEVAQRISESLGAQINPDLSWSSSFNTPSSLTPTLILSKRQEPSS
AVKTSAERIVFVRQLFPPVFKDDILETSEAGRPFIEEAKEKKIDCSPEEDNYVSCGWKQR
VPDAIDDGELRTTVESVLDGTEDVLSFLFTSRKSSLQRVRTREQVERRLTSALQEDPQAL
DATVAHRKLAGGTKPDLPFSDLAKPGEISYPLKKRDYEITQWTPLSLSEISGSNIEQVRA
GDSSTDQQTPQHMQHQKQDDASQHNLQTSLLQVIDGQESLSDMQLNAPQVSTLDASCAPV
SCAPPSCRKPKKFIYPAGNSSQDVRQRFNKPLHQYQTVPTQQQTPNTHRSRSQVCNSTIF
EKDVDMSQLCKAFAVDFSQEVCPSTSFVKHEEVVQGQSSPNPAPVMNMDAGAQPLCERQT
DTFDEQNGSSITGQNAFLSQLDISNNHNNNTTASDGHSTTGYEASRCFTASQSQAFSGFK
TANGKTICISQEAVNVAKDLLDAFAGTDLTDSTALHNRDGSDNTEGTQDCRKSNHVLCPG
QKNTRLPPDRRIATQKSSTPHYPLDVCGFKTATDRRINVSSSSVWKAKKMFKELEDESSI
DNNLIGVQLKEVSGKPQVLESDFDVKSISPLLVLPLSSADACSALTASQKADVSELCSLL
EDANSQCEFTQVKPAKVNSSKPQESAQQAGEREWDPDILTGINFDDSFSNDIEHHKSVQR
DGVKLNNVLHINVENMSVGKISQSDFKTDLNTSVENVVNVQGNDLGRSQNSCAGMINNQK
SMVRNPEFIDTSGRSKSLDNCSFDSDSCIKEEPKAALSRTSMSGDESIFGKTILKMNSSV
ALNSAISCSGENLCGFRTAGGRKVLVSETALLQAKAFLSHCIDSDHKEFEEELGDDVNAT
IHKHGKMLSGAPTGQEESTVCGIGAPHSLKTTITGITLKAGIGGQSCGLSTEGNKMDCVS
VEALPNVRNHLDKVHQSYECESNQQNANSVTQVVDIKSRKGYRTVSQKVACVSTKAHQDA
STLTDRVGCAVNSTYIETMQGTQLESNLMGCNPVKRDSGFRTARGKSVLVSEKALLKARS
ILSETAENSHCDAVKHVNDFTNSSMKTLPVTKNPEVLISGKPIEEDVDLLMDSDVPEKRE
HETDTGHSDSGKSFGFSTANGKRISVSSTALQKAQKLLNECVQPQGLEQVNGSTVEPPPV
QRNSEQDCLGFSTASGKGIYVSAESVQAVKALLTDCDSLSKINCIKIKHAPKNGLDKDAG
SLLGNTSEDMITGSVLVTSGDISISEHSIHNPGVTHCGFSTASGKLVSVSSIAVEHARHL
FDESLRPEDSKPLIGVVLQHDEQKDLQDRGVNIYKASGKSVSMSATTLKSVHAIFDDCGH
VPAVSCGKNTKNSYHTDSEANNILSSPNITPETQNEGTKCGEHSTISFGFSTASGKDVAV
SKKALKEAYKQLEKCGVETLPKKNFDIAPEKHLKPAVPLDSERNQCNISCLSRPPKRHSS
GLSFQSDGLSNCTTTQQRYFEQEADACTKALLEDEDLHDTLHGTSGASPVNPHVEKRWSG
KRDWEYDDSKDQPPLKRRLLTEFNKSKRPLVPLKSSPNGVLNDRTVTCNVSLKPNITQPH
RTTMTPKRINEEPELTTPVSYAKQQEKLPVFVPPFIKQTNPEHQKGEKSLAHRAPRGFVP
PFKTKVNDCKRPFDSVAGSEDHTEMHEKCNGFVPVMKKICPHAEACIQDCSALSDLSHSR
ILPCRDGDDLNHKVEHGLNHEAPNTDVHTEGYKSPSPSEEALHCIQLAREMQDMRIRKKR
QTIRPLPGSLFLAKTSGVARVSLRAAVGYKCPRQHSEERLYMYGVPSEVCQVSSGSAKSF
KFPWKHFFKWEALSQAGGVQLADGGWLIPDHRGMLGKEQFYRALCDTPGVDPQLISEEWV
YNHYRWIVWKRASMERAFPQELGGLCLTPEQVLLQLKYRYDVEVDRSQRSALRKIMERDD
SPAKTLVLCVCDVETSGTTGKTEGPISTIWLTDGWYMIRAALDPPLTTLLQRGRLSVGDK
LVTHGAELVGSQDACSPLEAPKSLMLKISANSTRPARWDTRLGYHCDPRPFQLQLDTLFS
DGGVVGCVNLLVLRSYPMQWMEKTAGGVFIFRSERAEEREARSHEEQKQKAMESLFSRIQ
TQLEKEEEQKRKNRRVQKQTLSRREMETLQDGEELHEAMESDPTYLQADLREEQLASLCS
FRRSLEERRQAQLQDRFRRALQEAEQGSASCASRDVTPVWKLAVCDANRQQSSSSKGSIF
LLNIWRPKMELVSLLKEGGRYRAYHLSTSEDKRKASTAAISLTATKKTHFEHMKVVPELL
QEVFEPRQCPSFNSLQRHLFHSTYGEVDVVGYVIYISVKNGLSPVLYLVDERVDFVSVRC
SNTLRQLAVEELVKPQTLLIVSNALIRQASAPIPALYAGDFTAFRTSSSEPHTQERTRQL
KSLVQNLDQFFKSAEEKLSNLIPMQSLLTQSCSSLTSDPCQNAWNKQPQLPITPVGKGTL
ATGTSEGNHPKSLKRRRGFEYLSRIPSPPSLSPLVAAISPHVKKTFNPPRRSDILCTKSN
TSILSPQVPNFPRSEDEWVKDEELALINTQNLLD
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcatgtatatgggacaccaaaacagatttggggcccctggcccctaattgg
tttgaggaattgactgtgaaagcatcaagaaaagatgaaacagatgtgggagaatccatg
gcaactggaccatcaagccatgacatcgcctttaaacctccagggattaaagcagaaatg
tttttggctagtcagacatctacacccaagctcctccacaagccaccactagcttctcca
gaattcttgacgaaaggaacacctgcatctgcacaggtcttgttattgaaggagtctagc
ctgtgcccatttggatcagaaaaagagagtgggcctttcaatcaccaaagaagtactgaa
ctaaaaatagtccatgaacaagtggaaacgcctaaaagattttcgtctgaagttgcacag
cgaatttcagaaagccttggtgcccagatcaatcccgacctgtcctggagcagttctttt
aacaccccatcatctctgacaccaaccctcattttatctaagagacaagaaccaagctca
gctgtcaagacttctgcagaaaggatagtttttgtgcggcagctttttcctcccgtcttc
aaagatgatatcttggaaacatcagaagcgggcaggccattcattgaggaggctaaagaa
aagaagattgactgctctccagaggaagataattatgtcagctgtgggtggaaacagagg
gttccggatgccatagatgatggagaactgcgaacaacggtggaaagtgttcttgatggc
actgaagatgtcctttccttcctcttcacgagcaggaagtcatccctgcaaagggtgagg
accagagagcaggtggagaggaggttaacctctgcattacaagaagatcctcaggctcta
gacgctacagtggctcacagaaagctggctggaggtacaaagccagacttgcctttcagt
gatctcgccaagccaggagagatcagctatcccctgaagaagagagactatgaaattaca
cagtggactccattaagcttgtctgagatttcaggttcaaatatagagcaggttcgcgca
ggtgattcatctactgaccagcaaactccacagcatatgcagcatcaaaagcaggatgat
gcctctcagcataatctgcagacatctttattgcaggttatagatgggcaggaatccctg
tcagacatgcagctgaatgcacctcaagtttccacactggatgcctcatgtgcacctgtc
tcatgtgcacctccctcatgtaggaaacccaagaagtttatttaccctgcaggaaactca
agtcaagatgtcaggcagcggtttaacaaacctcttcatcagtatcaaactgtgccaaca
caacagcaaacaccaaatacacacagaagcagaagccaagtttgtaactctacaattttt
gaaaaagatgttgacatgtcgcagctgtgcaaggcatttgcagtagattttagtcaagag
gtctgcccaagcacatcatttgtgaagcatgaggaagtagtgcagggccaaagctcccca
aatcctgctccagtgatgaacatggatgctggagctcagccactgtgtgaacgccagact
gacacatttgatgagcaaaatggctcttccatcactggacagaatgcctttctgtcacag
cttgatataagtaacaaccacaacaacaacacaaccgccagtgatggtcattccactaca
ggatatgaagcatccaggtgtttcacagcgtctcaaagccaagctttttctggtttcaaa
acggccaatggtaagactatatgtatttcacaggaagctgtaaatgtggcaaaagactta
ctggatgcatttgctggaactgatctcacagactctactgccctacacaacagagacgga
tcagacaacactgaaggcactcaggattgtagaaagagtaaccatgtgctctgcccaggg
cagaagaacactagactcccacccgacagaagaatagcaactcagaagagcagtactcct
cattaccctttggatgtgtgtggtttcaaaactgccacagatagaagaataaatgtttct
tcatcgagtgtctggaaagccaagaaaatgttcaaggaattagaagatgaatcctcaata
gataataacctcattggagtccagttaaaagaggttagtggaaaaccacaggtccttgag
tcagactttgatgtgaagagcatatcacctctgctggtacttcctctcagttcagctgat
gcttgctcagccttaacggcatcacaaaaagcagacgtgtctgagctctgcagcctgcta
gaggatgcaaacagccagtgtgagttcacacaagtcaaaccagccaaggtgaactctagc
aaaccccaggaatctgctcagcaggcaggggagagagagtgggacccagatattctgaca
ggcatcaactttgatgatagttttagcaatgacatagaacatcataagtcagtgcaaaga
gatggtgttaaattaaacaatgttttacatatcaatgttgaaaatatgtcagtaggtaaa
atatcacagtcagactttaagactgatttaaacacttcagtggaaaatgtagtaaatgtg
cagggcaatgatttaggtagaagtcagaacagctgtgctggaatgataaacaatcaaaaa
tccatggtcaggaatccagagttcatagacacctctgggagaagtaagtcattggacaac
tgtagttttgacagtgattcttgcattaaggaagaacccaaagctgccctcagtagaact
agtatgtctggggatgaaagtatttttggtaaaactatattgaagatgaactccagtgta
gcactcaattcagccatttcttgctcaggggaaaacctctgtggattcagaaccgcggga
ggcaggaaggtgcttgtgtctgaaactgcactccttcaggcgaaggcatttttgagtcac
tgtattgattctgaccacaaagaatttgaggaggaacttggtgatgatgtaaatgccaca
atacataaacatggaaaaatgttaagtggtgctccgacaggacaagaagagtctacagtg
tgtggcattggtgcccctcacagtctgaaaacaaccattacagggattacactcaaagct
ggtattggtggacagtcatgtggactcagcacagaaggcaacaagatggattgtgtatct
gtagaggcattaccaaacgtcaggaatcatctggataaggtacatcagtcatatgagtgt
gaatctaatcaacagaatgcaaattcagtaactcaagttgttgatataaagtctaggaaa
ggatacaggacagtaagtcagaaagttgcatgtgtttctacaaaagcccaccaggatgca
tcgactttaacagaccgtgttggatgtgcagtgaattcaacctacatagaaacaatgcaa
ggcactcaattggagtccaatttgatgggttgtaatccagtcaaaagagactctggtttc
agaactgcaagggggaaatctgtgcttgtgtctgaaaaagcgttgttaaaagcaaggagt
attttgagtgagactgcagaaaatagccattgtgacgctgttaaacatgtaaatgatttt
acaaactcttcaatgaaaacgctgccagttaccaaaaatcctgaagtcttaatttctgga
aaacctattgaggaggatgtggatttgttgatggatagtgatgtgccagaaaaaagggaa
cacgaaacagacacaggtcacagtgattccggaaaaagctttggatttagtacagcaaat
gggaaacgtatatctgtgtctagtactgcacttcagaaagcacaaaaacttttaaatgaa
tgtgtacagccacaaggcttagaacaggttaatggttctacagtagaacctccaccagtg
caaagaaacagtgagcaagattgtttgggtttcagcacagcaagtggtaaaggaatatat
gtttcagcagagtcagttcaagctgtgaaagcgctattaactgattgcgattcattatca
aaaataaactgtatcaaaattaaacatgctcccaaaaatggactggataaagatgctggc
agtctccttggtaatacctctgaggacatgataactggatctgttctagtaacaagtggg
gacattagtataagtgaacattcaatccataatccaggagtcacccattgtgggttcagc
actgcaagtggcaaacttgtgtccgtatccagtattgctgtcgaacatgccaggcacctg
tttgatgaaagcctaagaccagaagattcgaagcccttaataggtgttgtattgcagcat
gatgaacaaaaggatctgcaggacagaggtgtgaatatttacaaagcaagtggtaaatct
gtgtccatgtctgccacgacacttaaatctgttcatgctatatttgatgattgtggtcat
gttcctgctgtcagttgtggaaaaaacacaaagaattcctatcatactgattccgaggca
aacaatattttgagtagtcctaacatcacaccagagacccaaaatgaaggcacaaaatgt
ggagaacattcaaccatatcttttggatttagcacagcaagtggtaaagatgttgctgta
tcaaagaaagctttgaaggaggcatataagcagttggagaaatgtggtgttgaaacgcta
cctaaaaagaattttgacattgcaccagaaaaacacctgaagcctgcagtacccctagac
tctgagaggaaccaatgcaacatttcctgtttgtcaagaccacctaaaaggcactcctct
gggttgagctttcagtctgatggtctgagtaattgcaccactacccagcaaagatacttt
gaacaggaagctgacgcttgcaccaaggccttactggaggatgaagatcttcatgatact
ctccatgggacatcaggtgcaagtccagtaaatccacatgtggaaaaaagatggagtgga
aaacgggattgggaatatgatgattccaaagatcagccacctctgaaaagacgtcttcta
acagagtttaacaagtcaaagagaccccttgtgcctttgaaaagctccccaaatggtgtt
ttgaatgatcggacagtaacatgcaacgtgtcactaaagccaaatattactcaaccacat
aggactactatgacaccaaagaggataaatgaagagccagagttgactactcctgtgtcc
tatgccaaacagcaggaaaagttgccagtgtttgtgcccccttttattaaacaaacaaat
cctgaacatcagaaaggggagaagtctctggcccatagagcaccgaggggttttgtgcca
ccgttcaaaacgaaagtaaatgactgcaaacgtccctttgactctgttgctggatctgaa
gaccatactgagatgcatgaaaaatgcaatggttttgttcctgtgatgaaaaagatttgc
cctcatgctgaggcttgcattcaggactgctctgccctttcagacttaagtcacagcagg
attcttccttgcagagatggggatgatctcaatcacaaggttgagcatggccttaatcat
gaggcaccaaacacagatgtacacacagaaggttataaatcacctagcccctcagaggaa
gccttacattgtatacaacttgctagagagatgcaggacatgaggatcagaaagaaacgg
cagacaatcagacctcttccaggaagcctcttccttgcaaagacatctggcgtagccaga
gtctcactccgagccgctgtgggatacaagtgtccaagacagcactcagaggagaggttg
tatatgtatggagtgccctctgaggtgtgccaggtcagtagtggtagtgcaaagtctttc
aagtttccatggaagcacttcttcaagtgggaggcactcagtcaagctggtggagttcag
ctggctgatggaggctggctcatcccagaccacagaggaatgctgggaaaagagcaattt
tacagagcactgtgtgatactcctggtgtggacccgcagctgatcagcgaggaatgggtg
tataaccactaccgctggatagtgtggaagagggcttccatggagagggcctttccccag
gagctgggaggcctttgccttaccccagagcaggtgctactgcaactaaagtacaggtat
gatgtggaggtggacaggagccagagatcagccctgaggaagatcatggagagagatgac
tccccagccaagacattggtcctgtgtgtgtgtgatgtggagacctctggaacaaccggc
aaaactgaaggaccaatatccaccatctggctaactgatggctggtacatgatcagggct
gcactcgaccctccccttactactttgctgcagagagggcgcttgagtgtgggagacaag
ctggtgactcatggagctgagctggtgggctctcaggatgcctgctctcctctggaggct
cctaaatctttgatgttgaagatttcagctaacagcaccagaccagcacggtgggatacc
aggctgggataccactgtgacccacgccctttccagctccagctagacaccttgttcagt
gatggaggtgtggtgggctgtgtgaatttactggtgctcaggagctaccccatgcagtgg
atggagaaaacagctggaggggtgttcatcttccgcagtgagcgtgctgaggaaagggaa
gccaggagtcatgaggaacagaagcagaaggccatggagtcactcttcagccgcattcag
actcagctggagaaggaggaggagcaaaaaaggaaaaataggagggtacagaaacagaca
cttagtcgtcgagagatggaaactttacaagatggggaggaacttcatgaggccatggag
tctgacccaacgtacctacaggctgacctacgtgaggagcagttggccagtctttgcagc
ttcagacgctcattggaggagaggaggcaggcgcagctgcaggaccgtttccgacgggct
ttgcaggaggcagagcaggggagtgccagttgcgccagtagggatgtcaccccagtgtgg
aaacttgcagtctgcgacgccaaccgccagcagagcagcagcagtaaaggctcaattttc
ctgcttaacatctggcgccctaaaatggagttggtctcactgttgaaggaggggggtaga
taccgagcctatcacttgtccacatcagaggacaagaggaaggccagcaccgctgctatc
tcactcactgccaccaagaaaacacattttgagcatatgaaggttgtgccggagctgtta
caagaagtatttgagccacgtcagtgcccaagcttcaactctcttcagagacatttattc
cactctacctatggggaggtggatgttgtaggatatgtcatctacatcagtgtcaaaaat
ggtctctctccagtgttgtacctagttgatgagagggtggactttgtgtctgtccgctgc
tccaatactctgaggcagctggctgtggaggagcttgtgaagccccagacccttttaatt
gtgagcaacgccctcatccgtcaggcctcagcacccattccagccttgtatgcaggagac
tttacagcgttcagaacaagctcttcagagcctcatacccaggagcgaacgagacagcta
aaaagtctagtgcagaacctagaccaattttttaagagtgcagaggagaaactgtctaac
ttaatccccatgcaaagcttattgacccagtcatgttcaagtttgacatctgatccatgt
cagaatgcatggaataagcagccacaactgcccattacccctgtgggcaaggggactctg
gcaaccgggacctcagagggaaaccacccaaaaagcctgaagagacgaaggggttttgag
tacctatcacgtatcccctctcccccttctcttagccccctggttgctgcaatatcccct
catgtgaagaaaacgttcaatcctcctcggaggtctgatatactgtgtactaagagcaac
acctctattctatcaccacaagtgcctaactttcctcgatcagaagacgaatgggtgaag
gatgaggagttagccttgataaacactcagaatttgctggattga
DBGET
integrated database retrieval system