Alosa sapidissima (American shad): 121683627
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Entry
121683627 CDS
T11137
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121683627 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121683627 (snrpa)
Spliceosome [BR:
asad03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121683627 (snrpa)
Complex B
121683627 (snrpa)
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
Motif
Other DBs
NCBI-GeneID:
121683627
NCBI-ProteinID:
XP_041919274
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All DBs
Position
15:complement(8080510..8083982)
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AA seq
319 aa
AA seq
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MFKCLPTSFPPSVFITRRSYCGSSPFKRWSGIEMAAQDVRLNHTIYINNLNEKIKKDELK
KSLYAIFSQFGQILDILVSRTIKLRGQAFVIFKEINSASNALRSMQGFPFYDKPMRIQYS
KMDSDIIAKMKGTYVERDRKKEKRKPKPAEVPGGKKGVAAAAAAAAMGPGVPAAMPGMPP
MSQAPRMMPMPGQPPYMPPPGMMPPPGMGPGQMPPGAMPPGQMMPGQMPGQMPHAQAVSE
NPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAREA
LQGFKITQTNAMKISFAKK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgccttcccacctcatttcctccttcagtgttcatcactcggcggtcttat
tgtggcagtagtccattcaaacgctggagcggaatcgaaatggctgcccaggacgtgagg
ctcaaccatacaatctacatcaacaatctaaacgagaagattaaaaaagatgagctgaag
aagtctttatacgccatcttctcccagtttgggcagattcttgacatcttggtctcccgg
actatcaaactgaggggtcaagcttttgttatattcaaggaaatcaacagtgcctccaat
gctctgcgatctatgcagggtttccccttctatgataaacctatgcgtatccagtattcg
aaaatggactccgacatcatagctaagatgaagggaacgtatgtggagcgggaccgcaag
aaggagaaaagaaagcccaaacctgctgaggttcctggagggaaaaagggtgttgctgca
gctgcagccgctgctgctatgggccctggggtacctgccgctatgcctggtatgccaccc
atgagccaggcgcccagaatgatgccaatgccaggacagcctccttatatgccacctcct
ggtatgatgcctccccctggcatgggccctgggcagatgccccctggtgctatgccccct
ggtcagatgatgcctggacagatgccaggccagatgccccatgcccaggcagtgtccgag
aaccctcccaatcatatccttttccttaccaaccttccagaagagacgaacgagcttatg
ttgtctatgctcttcaatcagtttcctggattcaaagaagtgcgtctggtccctggacgc
cacgacatcgccttcgtggagtttgataacgaggtgcaggcaggcgcagctagagaggcc
ctccagggctttaagatcacacagaccaatgcaatgaagatctcctttgccaagaaataa
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