Alosa sapidissima (American shad): 121683712
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Entry
121683712 CDS
T11137
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121683712 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121683712 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121683712 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
asad03029
]
121683712 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121683712 (si:ch211-11n16.2)
Membrane trafficking [BR:
asad04131
]
Autophagy
Other autophagy associated proteins
Others
121683712 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121683712 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
MMR_HSR1
AIG1
Motif
Other DBs
NCBI-GeneID:
121683712
NCBI-ProteinID:
XP_041919399
LinkDB
All DBs
Position
15:complement(16377949..16396366)
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AA seq
662 aa
AA seq
DB search
MSEMLLKEMEEISLTSHHKGIEENGSERSFLLVDENENLQVRDVEHFLQKLGFDSDSTLG
VKVLSIFGNTGDGKSHTLNHVLFDGEEVFATSPSPTTCTVGVWAAFEPSLGLVVLDTEGL
LGATTHQNRRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLGSASAAYLRYFTPQLRALS
SRCGLDVPLSSLGPAVMVFQETSRTQLLGQDSSCPGQADTLLQKRFHDLNLTTEAFSSFQ
YVGTQTITPPTDYSQLLQAVRHQVKNMATRAPRAPSIVFSALQALSERFCGDISDERVSV
YSFFPDEYFTCPSVCLSCNVRCKNGMNHQKDGVHHRADGLCQYAHQYNNKVLICKRCYEG
GREMIVIPKTSASTDNPWFGLAKYAWSGYVLECPTCGIIYRSRQYWMGNQDPEGSVVRTE
VKHVWPGSELFPTDHQNAAQRVLDGMNFVIQSVSEYSTGPTKAITSWLTDQVAPPYWRPN
AEIMACRACEKPFEELERKHHCRACGEGFCQACSSRSMPVPERGWGSGPVRVCDACYRQG
GPNTTTTITTNQAAQLEPHALMARKVTEVAQSTLDMVSTAVDYPLCFVKGVARPDYWVPD
HEIVECHQCHKAFTPSIPKHHCRACGQGVCGGCSAQSRPVPSRGWDHPVRVCDDCARQKD
SL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatgctactgaaagaaatggaggaaatatctcttacgagtcaccataaagga
attgaagagaatggtagcgagaggagtttccttttggttgacgaaaatgaaaacttacag
gttcgtgatgtcgagcatttcctacagaagctgggctttgacagtgacagcacccttggc
gtcaaggtcttgtccatctttggcaacaccggtgatggcaaatcccacacactcaaccat
gtgctttttgacggagaggaggtgttcgccacctcgccctcccccaccacctgcacggtc
ggtgtgtgggctgccttcgagcccagtctgggcctggtcgtcctggataccgagggcctc
ctcggcgccaccacccaccagaaccgccgaatgcggctgctgctgaaggtgctggccgtg
tcggacattgtggtgtaccggacacgggccgagcggctgcacaacgacatgttccagttc
ctggggagcgcctctgctgcctacctgcggtacttcaccccgcagctgcgcgccctctcc
agccgctgcggcctggacgtgcccctctccagcctggggcctgccgtgatggtgttccag
gagacgtcacgcacacagctgctgggacaggatagctcatgtccaggccaggctgacacg
ctactgcagaagcgcttccatgacctcaacctgaccactgaagccttcagctcgttccag
tatgtgggcactcagaccatcacgccccctacagactactcccagctcctgcaagctgtc
aggcaccaggtgaagaacatggctacccgcgccccacgcgcacctagtattgtcttcagt
gcgctgcaggccctgagtgagaggttctgtggggacatttctgatgagagggtcagcgtc
tactccttcttcccggatgagtacttcacctgcccatcagtttgcctcagctgcaatgtg
cggtgcaagaatggcatgaaccaccagaaggacggtgtacaccacagagctgatggcttg
tgccagtatgctcatcagtacaacaacaaggtcctcatttgtaagaggtgctatgaggga
ggtcgggagatgattgtgatacccaagacctcagcctcaaccgacaacccctggtttggc
ctagccaaatatgcctggtcagggtatgtactcgagtgtcccacctgtggcatcatctac
cgcagtcggcagtactggatggggaaccaggaccctgagggcagtgtggtccgaaccgaa
gtcaagcacgtctggcctgggtcagagctgttccccaccgaccatcagaatgcagcccag
cgggtcctggacggcatgaacttcgtcatccagtcagtgtccgagtacagcaccggaccc
accaaggccatcacgtcctggctcacagaccaggtggcgccgccttactggaggcccaat
gcagaaatcatggcgtgccgtgcctgtgagaagccctttgaggagctggaacggaagcac
cactgtcgtgcatgtggcgagggcttctgccaagcctgctcgtcccgctccatgcctgta
ccggagcgcggctggggcagcgggcccgtgcgcgtctgcgatgcctgctaccgccaggga
ggccccaacaccaccaccaccatcaccaccaaccaagcggcccagttggagccacacgct
ctaatggcgcgtaaagtgacggaggtggcccagtcaacactggacatggtgtccaccgct
gtggactaccccctgtgttttgtaaagggtgtggcacggcctgactactgggtgcccgat
cacgagatcgtcgagtgccaccagtgccacaaggccttcacgcccagcatccccaagcat
cactgccgggcctgcgggcagggcgtgtgtggcggctgctcagcccagagccggccagtg
ccctctcgtgggtgggaccatccggtgcgggtgtgtgacgactgtgccaggcagaaggac
agcctgtag
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