Alosa sapidissima (American shad): 121683765
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Entry
121683765 CDS
T11137
Symbol
chrd
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121683765 (chrd)
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
121683765
NCBI-ProteinID:
XP_041919511
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Position
15:32827156..32844195
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AA seq
813 aa
AA seq
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MEAVGAFVLCWVINCAWMPLCSGSRMKSPALPIQSEREPVPSKGLSGCSFGGRFYSLEDT
WHPDLGEPFGIMHCVKCNCEPQRSKRKVFGKVSCRNIKQDCPEAKCAEPVLQPGHCCKTC
PDGDSSRQPLESLFDGYEYFQEKDGDLHKSYNDRSYLSAEASNPTDTRTDFVALLTGVSD
SWLPSSSGVGRARLTLTRTGLAFSITYNSFARPSRIMFLDSDGNTAFEFSVPKADTDMIC
GVWKNLPKSHLRQLQAEQLRVSMVASNGRREEIKGQVIKHRALFAETFSAILTSEVEHSG
IGGMAMLTLSDSENNLHFILMLQGLTTHSHTGLVPIRLQLQYRQHTLREIRANISAQDAD
FAEVLTDLNVRELFWLSRGQLQITVETEGNDPRVISGFITGRKSCDILQSVMASSEALTP
AKTGAVGSAIFFLHDNGTLDYQVQVVGVATKVIGVTLELKPRRRSKRSVLYQLSEGWGAE
SGKGRGSVGRLEARHIHMLLQNELFINVATEMHADGELRGQVVSLPYSGLEALTQELPVP
LAGQLVTPPVASSAGGHAWVALDERCHLHYEIIVSGLSRSDDLTVNAHLHGLAEIGEMDE
SSPSQRRLLTGFYGSQAQGVLRDLSVDLLRHLDQGTAYIQVSTKLNPRGEIRGQVHVPNS
CEFGSRGAVVEEAEFDELVFVRDPEELRKDPLTCFFEGEHHTHGSHWTPQYNACFNCSCQ
KRTVICDPVICPALSCPHTRQPEDKCCPVCDERKDLKDTRASVKAEEHPEGCYFEGDQKM
HAPGTSWHPFVPPLRLHQMCRLHLQGCYGGGAV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcggcgcattcgtgctgtgctgggtgattaactgcgcatggatgccgttg
tgttcaggctcacgaatgaagtctcctgcgctgcctatacaatctgagcgcgagccggtt
ccatcgaaaggactgtcggggtgctccttcggtggccgattctactctctggaggacacc
tggcatccggacctaggagagccatttgggatcatgcactgcgtcaagtgcaactgtgaa
ccacagaggagtaaaagaaaggtgtttgggaaggtgagctgcaggaacattaagcaggac
tgtcctgaagccaaatgtgctgagcctgtgctgcaacctggacactgctgcaagacctgt
cctgatggggactccagcagacagcccctggagtctctgtttgatggctatgagtatttt
caggagaaggacggggacctgcacaagtcctacaatgaccgctcctacctcagtgcagag
gcgtccaaccccacagacacccgcacagattttgttgctctgctgacgggtgtgtccgac
tcctggctgcccagttccagtggggtgggacgcgctcggctcactttaactcgcactggc
ctggcattctccattacttacaacagctttgcacggcccagtcgtatcatgtttctggac
tccgatggaaacactgcatttgagttcagcgtacccaaggctgacacagacatgatctgt
ggcgtgtggaagaatcttcccaagtctcatttaagacagctgcaggcggaacaactgcgc
gtctccatggtagcatccaatgggagaagagaggagatcaagggacaggtcatcaaacac
agagcgctgtttgcagagacgttcagtgcgattctgacctcagaagtggagcattctggg
ataggtggcatggccatgctgacgctgagtgactcggagaacaacctccacttcatcctg
atgttacaaggacttaccacacactctcacacaggcctggtgcccattcggctccagctg
cagtatcgacaacacacactgagggagatccgagccaacatcagtgctcaggatgcagac
tttgcagaggtgctcacagatctcaacgttcgcgagctgttctggctttccagaggccag
ctgcagatcaccgtggaaacggagggcaatgacccgcgtgtgatctctggcttcatcacc
ggcaggaagtcatgtgacatcctgcagagtgtgatggcgagcagtgaggctttgactcca
gctaaaaccggtgcggtgggctcggccatcttctttctccatgacaacggaacgctggac
taccaggtgcaggtggtaggcgtggccacaaaggtgattggcgtgacgctggagctgaaa
ccacggcgacggagcaagcgcagcgttctgtaccagctgtccgagggctggggggcggag
tctgggaaggggcgtggcagcgtgggccggctggaggcgcggcatatacacatgctgctg
cagaacgagctgttcatcaacgtcgccacggagatgcacgccgacggggagctgaggggg
caggtggtctcactgccctacagcggcctggaggcactgacacaagagttgccggtgccc
ctggctggtcagctggtgactcctcccgtggccagcagtgcgggggggcacgcttgggtg
gcgctggacgagcgatgccacctgcactacgagatcatcgtcagcggactcagcaggagc
gacgacctgaccgtcaacgcccacctccacggattggccgagatcggagagatggacgag
tccagccccagtcagaggaggttgctcactgggttctatggctcacaggcccagggcgtg
ttgcgggacttgagtgtggacctgctcaggcaccttgaccagggcactgcctatatccag
gtcagcaccaaactcaacccacgcggggagatacgtggacaggttcatgtgcccaacagt
tgtgagtttggttcccgcggtgctgtggtggaggaggcggagtttgatgagctggtgttt
gtgcgtgatcccgaggagctccggaaagatccgctgacgtgcttcttcgagggcgagcac
cacacacacggctcccactggactccgcagtacaacgcctgcttcaactgcagctgccag
aagcgcactgtcatctgtgatccagttatctgtccagccctctcatgtccacacactcgc
caaccagaggacaaatgctgccctgtgtgtgatgagaggaaggacctgaaagacaccaga
gcttcagtgaaagctgaggaacacccagagggctgctactttgagggcgatcagaagatg
cacgcccctggaacctcctggcatcccttcgtccccccccttcggctacatcaaatgtgc
cgtctgcacctgcaagggtgctacgggggaggtgcagtgtga
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