Alosa sapidissima (American shad): 121683857 Help Entry 121683857         CDS       T11137                                  Name (RefSeq) toll-like receptor 4 isoform X1   KO K10160   toll-like receptor 4 Organism asad  Alosa sapidissima (American shad) Pathway asad04145   Phagosome asad04217   Necroptosis asad04620   Toll-like receptor signaling pathway asad04621   NOD-like receptor signaling pathway asad05132   Salmonella infection Brite KEGG Orthology (KO) [BR:asad00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121683857   09143 Cell growth and death    04217 Necroptosis     121683857  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     121683857    04621 NOD-like receptor signaling pathway     121683857  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     121683857  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:asad04131]     121683857   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:asad04054]     121683857    04090 CD molecules [BR:asad04090]     121683857    00536 Glycosaminoglycan binding proteins [BR:asad00536]     121683857 Membrane trafficking [BR:asad04131]  Endocytosis   Phagocytosis    Toll-like receptors     121683857 Pattern recognition receptors [BR:asad04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    121683857 CD molecules [BR:asad04090]  Proteins   121683857 Glycosaminoglycan binding proteins [BR:asad00536]  Hyaluronan   Cell surface receptors    121683857 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 TIR TIR_2 LRR_1 LRR_9 LRR_At5g56370 LRR_EndoS ThsB_TIR Motif Other DBs NCBI-GeneID:  121683857 NCBI-ProteinID:  XP_041919634 LinkDB All DBs Position 15:complement(7599029..7616729) Genome browser AA seq 822 aa AA seqDB search MAALTVYRFALLDFIILCTAKIIKDPGDCLEVIPSLKYSCFRRNLSYIPTSVPPSTQHLD FSFNYLATLQRHMFLRLPLLQHLDLTRCHIQNIDNEAFFNVRNLSVLILTGNPLKHLGKN SINVLEKIHKLVLVDIGLLSLDSLNLQSLTSLKELKVGTNRLFSLALPSYAVSFKDFTLL DLHKNNISTIRAVDTSVLRQMSSNLTLILSRNPLSFIETGAFNGLYLGEINLLDTISSTT AREALGGLSGLTVKKLKIGHFLAMGKIQMNSDSLTSLCFIKFQEIYFCQSFFVELPSHIV LCMINSTKISLRYVGINTWEHSYFPNLKEIVVVEGQMGSLPNLLLSHQHKLKKLVINDNQ YSPIFKSFADLPSLEYIDLSHNNLIMSCCDAEFIGVPKLRYLNLSENARIKIRNFGLFNY SSLEILDLHGTEVEVVDNWVIMHNLRNLKMFDLSYTQFTFDSNAIFYGLSSLKELKMAGN SIEKDIFGKLFSNLSTLEVLDISNCGLKDIPFTSFQDLHNLRHLTLSGNKLTTVDFLTCP SLSKLTSIHVDNNHIARISSNVLQNLPADLSVVDLSFNPIECSCTQTEFISWIINHQSVL KDPQLMSCKSSSTNSRVINFDPTHCVHTNRVIITVSILAAVTVLLLSALLYKYQFYIHYV FILLRGYRMSRQQECSYDAFVIYSSKDEAWVLDELVENLEKGHPPIQLCLHERDFQAGKS ITSNIVDEGIMGSRKVIVVVSQHFLDSSWCQFEFELAQSWLVFRRNASIIIIILEDVEDK KIRRLFGLHKYLKKNTYLKWKGNALSNIRFWARLRKAIIANK NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atggccgccttgacagtataccggtttgcactgttggactttattattctgtgtacagcc aagataataaaagacccgggagattgcttagaggtcatccccagtctcaaatactcatgc ttcaggagaaacctgagctacataccaaccagtgtccctccctccacacaacatttggac tttagttttaattacctcgcaacattgcagagacatatgttcctgagattaccattacta caacatcttgatctcacaagatgtcacatccaaaacattgacaatgaggccttctttaat gtaaggaatttgtctgttttgatcctcactggaaatccactcaaacatttaggaaaaaac agcattaatgttttggaaaaaatacacaagcttgttctagtagacatcggtctgctctcc ttagacagtctgaatttacagagtttaacaagcctaaaggaattaaaagtgggaacaaac agattattttctttagcccttccatcttatgctgttagtttcaaggacttcacattactg gaccttcataaaaacaacatatctacaatcagagctgttgacacttctgttttgcgtcag atgagtagcaatttaactttaatattgtccagaaacccactatccttcatagaaactgga gcatttaatggcctttatctgggagagatcaatctacttgacacaatctcatccacaact gcaagagaagctcttggaggtcttagtggattgacagtgaagaagttgaaaataggacat ttcctggcaatgggaaagatccaaatgaattcagattccctgaccagcctttgtttcata aagttccaagagatatatttttgtcaatccttttttgttgaactacccagtcacatcgtc ctttgcatgattaattctacaaaaatctctctgagatatgttggaataaatacctgggaa cattcttattttccaaacctcaaagagattgttgtggttgaaggtcaaatgggctcactg ccgaatcttctactgtctcatcaacacaaattaaagaaactggtcatcaatgacaatcaa tattcaccaatatttaaaagctttgctgatttgcctagtctggaatacattgatctgagt cataataatttgataatgtcttgctgtgatgctgaatttattggtgttcctaaactccgg tatctaaatctaagtgaaaatgcaaggataaaaattagaaactttggactttttaattat tcatctctagaaatattggatcttcatggaacagaagttgaagttgtagataattgggtt attatgcacaaccttaggaatttaaaaatgtttgacctttcctacacacaatttaccttt gacagtaatgctattttttatggcctgagcagtctgaaagaactgaaaatggctggcaac agcattgaaaaagacatttttggcaaattattttcaaatctctcaactttggaggtactg gacatttcaaattgtggccttaaagacatacccttcacttctttccaagatttacataat ttgagacacctaaccctaagtggaaacaaactgaccacagtggactttctcacctgtccc agtctgtctaaactaacctccattcatgtagacaataaccacatagcccgcatctcttca aacgttcttcagaatctccctgcggatctttcagtagttgatttgtccttcaatcccata gaatgttcctgtactcagactgaatttatttcctggattattaatcatcagtcagttcta aaagatcctcaactaatgtcatgcaaatcctcatccacgaactccagagtgattaacttt gaccccacacactgtgttcacacgaacagagtgataataactgtgtccatattagcagct gtaactgtactcctattgtctgcattgctgtataagtaccagttctatatacattacgtc ttcatattgctaagaggctacagaatgtctagacaacaagaatgttcttatgatgccttt gtaatctactcaagcaaggatgaagcctgggtgttggatgagcttgtggaaaatcttgag aaaggacatcctccaattcagctttgcctgcatgagcgagatttccaagcaggaaagtcg attacctccaatatagtggatgaaggcatcatgggtagccggaaagtcattgtggtggtg tctcagcacttcctagacagctcctggtgtcagtttgagtttgaactggcacaatcctgg cttgtcttcaggcgaaatgccagcatcatcatcatcattctggaagatgtggaagataag aaaataaggagactgtttggacttcataagtatctgaaaaagaacacctacctcaagtgg aaggggaacgctctaagcaatatccggttctgggcccgtctcagaaaagccattattgca aacaaatga

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