Alosa sapidissima (American shad): 121684053
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Entry
121684053 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04517
IgSF CAM signaling
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121684053
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121684053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121684053
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121684053
Intermediate filaments
Intermediate filament-binding proteins
121684053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
TMP_3
Motif
Other DBs
NCBI-GeneID:
121684053
NCBI-ProteinID:
XP_041919917
LinkDB
All DBs
Position
15
Genome browser
AA seq
2684 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNRPVSTGHWETETTSAKLFECSRIKALAEERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNTRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLARSNATHNLQQAFNVA
EQNLGLTKLLDPEDVNTENPDEKSIITYVVSFYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIERYEELASELLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRTELIRQEKLE
LQAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEDRISVV
VELAAEMEAEGYYDIRRISARKENILGQWKLLKELVVGRKTRLEKNLALQKTFQDMVYMI
DWMEEIQIQLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVQTLNTVALKFTTIEGYQ
PCDPQVICNRVNHVSTCLEELKQLASTRRAELEESRQLWAFYEELEESEAWIREKTSILS
AQTCGKDLSSVLRLLQNHKSLAGELLSRRSLLQQTMKKGKQILTQKSFGTAGIQERVMEA
KGEWKRLEEQAALRLGHLQEALDFFQFAAESDDLLAWLQDIYRLVSSEDFGHDEYSTRSL
LKKHRCVRESLEKHRANAAALRKHAASLPPPYRQLEEVQARTAEVEQLYAEVVDVAVLRQ
QWLHDALAVYHMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDNGHPSSTEVRGCQDHLNSRWNRIVELVEHKKDHLDSVLRIQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGSVLALQRRLSTMEGALSVLEPKLLHLQQEAEEL
ATAHPDKAVEVLVPFEGISLEWEELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWLVQTQ
TAAAADELPNTLEEAERLINCHASLKEEIGRYEEDYERLQAVSELLEAEEAPLPYAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFMRDVKQAEAFLNNQESGLAHVELPTTVE
TVEAAIKKHKEFTTTMELNLHRIKAVIEAGESLISQSNIYSERIKERVDTLANRGNQNRE
LAQQWLSKLNDQWELQSFLQDCHELGDWVAEKMLMARDTSRDEMQKLHKKWLKHQAYMAE
LAQNKEWLDKIEKEGQHLMEEKPELRDAVAQKLGEIRECWQDLESTTQAKARQLFEANRA
DLLVQSYSSLDQRLGQLENQLAHQDYGQDLTTVNKHLKKLQTMETQMEEWYQEVGELQQE
AASLPQQGQIMEDVSERQVVVESRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPLATSQEHGNTLQEVQQLMKKNQTLQRELQGHRARVEDVLERASLIASIRSPEADCV
RGGLEQLAGLWEALWIETEQRQLALDGMYQAQQYYFDVAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQSIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSL
KDLLEERKSRLEQQYWLYQLSREVDELEQWIAEREVVASSPELGQDYEHVTILQEKFTEF
ASETGSMGQERVTAINQMVDELIDYGHGDAATIAEWKDGVNEAWADLLELMETRGQLLAA
SHQLHKFFSDCREVSAQIDDKKRRLPEVRAQQGDTANTSTLQRLMHTFEHDIQLLVNQVR
QLQESSAQLRTVYAGEKAEAIARREHEVMHAWKELLVSCEDCRVQITTATDKLRFFSMVR
DQLMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARDKSVLTCIEMGKTLLAAR
NPASEEIRDKLERVLSKQRELSEKWDRHWEFLQQMLEVHQFAQEAVVAEAWLTAQEPFIS
SSELGSSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKIKAEQGKLPPTPLLGRK
VFLDPQEISPARSTPSSLLRQTIYEQQAVERGERAQPSPSSSSVACRLGSTVANYTPVLN
GSAYTRSIEARTSGLVGVAAGLGMSSPPMLAVSPPVTLVTTPAPAPAAAVTAAVVTTASE
ASGSPESKALVPERRAERILRKLAAQKPQESIDHLHEAVKPLLDRERERLERERESLERP
GGEVGVMAEVVLQDPPLGRERLNSEARSSELRVSTGGGGSGGSSRSELQAELHGQPPRHH
HRLERQLSNEQLVQARRDELPQELWRERAERERRLERQTSSELEGAGGPAQGQGQGHEAR
RRDRHRLDRQESSDREHSDRRSTEKRSTLADIVEQLQEREAAVARGDIPRLPNGLPEKVS
RPERPRARDRPKPRRRPRPKEPSGGEVREARRSRSAPAQSSPSVPQPPSHTAQHEGFLFR
KLDIESLKKAANSRSWANLYCVLSKGELGFYKDAKNTATPYNNEPLLSLSGCICDVNNGY
KKKKNVFTLKTKDGSEFLFHARDEDDLKGWVSNITKSINEHEEIAKWGQPQPTTSSTDEG
TRRDARKSEAEKSERGEKSDRDRDRVSERSDKGEKPEKRTGKKK
NT seq
8055 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccactgatctggacaatgcggaggcccagcggcagctcaacaacaac
aaccgacccgtcagcacaggacactgggagactgagaccaccagcgccaagctcttcgag
tgctcccgcatcaaagcactagcagaagagagagatgctgtccagaagaagaccttcacc
aaatgggtcaactcccacctggcgcgggtgtcctgccggatcgctgatctatacaacgac
ctgcgggacggctacatgctcaccagacttctggaagttctgtccggagaaatgctgcca
aggccaactcgaggccgcatgcgtatccactgcctggagaacgtggacaaggctctgcag
ttcctcaaagaacagcgggtccacctcgagaacgtgggctcccacgacatcgtcgacggc
aacacccgtctgaccctcggccttatctggaccatcatcctccgcttccagatccaggtg
atcaaaattgagacagaggacaacagagagacgcggtcagccaaggacgcccttctgctg
tggtgccagatgaaaacagcagggtaccctgaggtgaacattcataacttcaccacctgc
tggagggatggcctggctttcaatgcactcattcacaggcacagacctgatttaatcgag
ttccataagctggccaggtctaacgccactcacaacctccagcaagccttcaacgtcgca
gaacagaaccttggcctcaccaagctcctggaccctgaagacgtgaacacggagaacccg
gacgagaagtccatcataacctatgtggtgtccttctaccactacttctccaagatgaag
gcccttattgtagaggggaaaaggataggcaaggtcctggacaacgccattgaggcggag
aagatcatcgagcgatacgaggagctggcgtcggaactgttagagtggatcgagaagacc
atcagcataatcagcaaccagaagtttgccaactcgctcaccggtgtccagcagcaactc
caggccttcaccacctactgcaccatcgagaagcccatcaaattccaggagaaaggtaac
ctggaggtgctcctcttcaccatccaaagtaagctcagagccaacaaccagaagccatac
gtgcctcacgaagggaagctcatctcggacatcaacaaggcgtgggagaggcttgagaag
gcggagcatgagaggggcgtggccttgaggacggagctgattcgccaggagaaactggag
ctgcaggcgcagcgctttgaccacaagaccaccatgcgccaagcgtggcttaatgagaac
cagcggctagtctcacaggacaactttggctacgacctgccagcggtggaggcagccatg
aagaagcatgaggccatcgaggcggacatctcgtcctacgaggaccgcatcagtgtggtg
gtcgagctggcagccgagatggaagccgagggctactacgacatccgacggatctccgcc
cgcaaggagaacatcctgggccagtggaagctgctcaaggagctggtggtgggccgcaag
acgcggctggagaagaacctggccctgcagaagaccttccaggacatggtctacatgatc
gactggatggaggagatacagatccaactgctgtctaaagactttgggaaacacctgctg
gaggtggacgacctgctgcagaagcacagccttcaggaggccgacatctcagtgcaggcc
gagagagtgcagaccctgaacactgtggccctcaagttcaccaccatcgaaggctaccag
ccatgcgacccgcaggtcatctgtaaccgggtcaaccatgtgagcacgtgcctggaggag
ctgaagcagctggcgtccacgcgtcgtgccgagctggaggagtccagacaactctgggcc
ttctatgaggagctggaggagtcggaggcgtggatccgggagaagacgtccatcctgtcg
gcgcagacgtgcggcaaggatctgagcagcgtgctgcgcctgctgcagaaccacaagagc
ctggcgggggagctgctgagccggcgctcgctgctgcagcagaccatgaagaagggcaag
cagatcctcacgcagaagagcttcggcacggccggcatccaggagcgcgtcatggaggcc
aagggcgagtggaaacgcctggaggaacaggccgcgctgcgcctcggccacctgcaggag
gcgctggacttcttccagttcgccgccgagtccgacgacctgctggcgtggctgcaggac
atctaccggctggtgtccagcgaggacttcggccacgacgagtactccacgcgctcgctg
ctgaagaagcaccggtgtgtgcgcgagagcctggagaagcaccgcgccaacgccgccgcc
ctgcgcaagcacgccgcctcgctgccgccgccctacaggcagctggaggaggtgcaggcg
cgcacggccgaggtggagcagctgtacgccgaggtggtggacgtggccgtcctgcggcag
cagtggctgcacgacgcactcgccgtctaccacatgttcagcgaggtcaacgcctgcgag
gtctggatcgacgagaaggagcagtggctcaacaagatggaggtgcccgagaggctggag
gacgtcgaggtggtggcgcacaggttcgagagcctcgaccaggaaatgaacagcctgatg
ggaagaatactggatgtcaatcaaatagtgcagcagctcctggacaacggccaccccagt
tccactgaggtcagaggctgtcaggaccacctcaacagccggtggaaccgcatcgtggaa
ctggtggagcacaagaaggaccacctggactcggttctgcgcatccagaactacctgctg
gagtgcgctgagatcaagtcgcagatccaggacaagcgcaaggccatcgacgccacgcag
tacgtgggcagcgacctgggcagcgtgctggccttgcagcgccgcctctccaccatggag
ggcgctctctccgtgctggagcccaagctgctgcacctgcagcaggaggccgaggagctg
gccaccgcgcacccggacaaggccgttgaggtgctcgtgcccttcgagggcatcagcctg
gagtgggaggagctcaagaggacgctgcagggctgcgaggactcgctgaccgtggcgggg
cggctacagcagttcatccaggacctggactccttcctaacgtggctggtccagacgcag
acggcggcagcggccgacgagctgcccaacacgctggaggaggccgagcggctcatcaac
tgccacgcgtcgctcaaggaggagatcggccgctacgaggaggactacgagcgcctgcag
gcggtcagcgagctcctggaggccgaggaggcgccgctgccctatgccgcgctgcagcag
tggctacagaagctggacgtgggctggaacaagctgctggagatgtgggagagccgccga
gaggtgctcgtccaggcgcacatcttccacctgttcatgcgcgatgtcaagcaggccgag
gccttcctcaacaaccaggagtcaggcctggctcacgtggagttgcccaccacagtggag
acagtggaggcggccatcaagaagcacaaggagttcaccaccaccatggagctcaacctg
caccgcatcaaggccgtcatcgaggccggggagagcctcatcagccagagcaacatctac
tccgagcgcatcaaggagcgcgtggacaccctcgccaacaggggaaaccagaaccgggag
ctggctcagcagtggctcagtaaactcaatgaccagtgggaactacaaagcttcctgcag
gactgccatgagctaggggactgggtggcagagaagatgctcatggcgcgcgacacgtcc
cgtgacgagatgcagaagctgcacaagaagtggctgaagcaccaggcctatatggccgag
ctggcacagaacaaggagtggctggacaagattgagaaggagggccagcatctgatggag
gagaagccagagctgcgtgacgcggtggcccagaagctgggcgagatccgcgagtgctgg
caggacctggagagcaccacgcaggccaaggcgcggcagctcttcgaggccaaccgggcc
gacctgctggtccagagctactccagcctggaccagcgcctggggcagctggagaaccag
ctggcccaccaggattacgggcaggacctcaccactgtcaacaagcacctcaagaaactg
cagacaatggagacgcagatggaggagtggtaccaggaggtgggggagctgcagcaggag
gcggcgtccctcccccagcagggccagatcatggaggacgtcagcgagcggcaggtagtc
gtggagtcgcgcatcgtccgcctcatcgagccgctgaaggagcgccggcgcatcctgctc
gcctccaaggaggtgcaccaagtgggacgcgacctggaggacgaaatcctatgggtgcaa
gagcgcctccctctggccacatcgcaggagcacggcaacaccctacaggaggtgcagcag
ctcatgaagaagaaccagacactccagcgtgagctgcagggtcaccgcgcgcgggtggag
gatgtactggagcgtgcgtcgctcatcgcgtccatccgtagcccggaggcggactgcgtg
cgcggaggcctggagcagctggcgggcctgtgggaggcgctgtggatcgagacggagcag
cggcagctggcgctcgacggcatgtaccaggcgcagcagtactacttcgacgtggcagag
gtggaggcctggctcagcgagcaggagctgcacatgatgaacgaggagaagggcaaggac
gagccgagcaccctgcagctgctgaagaagcacctggtgttggagcagagcattgaggac
tacgccgagaccatcggcctgctctcacagcagtgccggcagctgctcgagctcggacac
cccgacagtgagcagatcagcaagcgtcagtcccagatcgaccgtctctacgtgtctctg
aaggacctgctggaggagcgcaagtcacgtctggagcagcagtactggctctaccagctg
agccgcgaggtggacgagctcgagcagtggatcgccgagagggaggtggtggccagctcc
ccggagctgggacaggactacgagcatgtcacgatcctccaggagaagttcacagagttc
gcctctgagacgggcagcatgggccaagagcgcgtgaccgccatcaaccagatggtggat
gagctgatcgattatggccacggcgacgcggccaccatcgctgagtggaaggacggtgtg
aacgaggcctgggccgacttgctggagctgatggagacacgtggccagctgctcgctgcc
tcgcaccagctgcacaagttcttctccgactgccgtgaggtctcggctcagatcgatgat
aagaagcgacggttgccagaagtgcgcgcgcagcagggagacacggctaacaccagcaca
ctgcagaggctcatgcacacgtttgagcacgacattcagctgctcgtcaaccaggtccgg
cagctgcaggagagctcggcccagctgcggacggtgtacgcgggggagaaggcggaggcc
attgcgcgacgggagcatgaggtcatgcacgcctggaaggagctgctggtctcgtgcgag
gactgccgggtgcagatcaccacggcgaccgacaagctgcgcttcttcagcatggtgcgc
gatcagctcatgtggatggacagcatcatctgccagatcggcaccggagagaagcccagg
gacgtgtcctcggtggaggtcctgatgaactaccaccagagcctgaagagcgaggtagag
gcgcgggacaagagcgtgctgacgtgcatagagatgggcaagaccctgctggccgcacgg
aacccggcctccgaagagatcagggacaaactggagagagtgctgtccaaacagcgagag
ctctctgagaagtgggaccgccactgggagttcctacagcagatgctggaggtgcaccag
tttgcgcaggaggcggtggtggcggaggcgtggctgacggcccaggagccgttcatcagc
agcagtgagctgggctccagcgtggacgaggtggagcagctgatccgccgccacgaggcc
ttccgcaaggccgccgccacctgggaggagaggttcagctcgctcagacgcctcaccacc
gtggagaagatcaaagccgagcaaggcaagctcccgcccactccgctgctgggccgcaag
gtgttcctggaccctcaggagatctcgccggcccgctccaccccgtcctccctcctgcgg
cagaccatctacgagcagcaggccgtggagcgcggcgagcgagcgcagccctcgccgtcg
tcctcgtccgtggcctgccgcctgggctccaccgtggccaactacacgcccgtgctcaac
ggctcggcgtacacgcgcagcatcgaggcccgcaccagcggcctggtcggggtagccgcc
ggactgggcatgagctcgcccccgatgctggccgtgtcgccgcccgtgaccctggtgacg
accccggcaccggcaccagcagcggcggtcaccgcggcggtggtcaccacggcgtcggag
gcgtcggggtctccggagtccaaggctctggtccccgagcgccgcgccgagcggatcctg
cgcaagctggcggcgcagaagccccaggagagcatcgaccacctgcatgaggccgtgaag
ccgctgctggaccgcgagcgggagcggctggagcgcgagcgcgagagcctggagcgcccg
ggtggcgaggtgggcgtcatggccgaggtggtcctccaggaccccccgctgggtcgcgag
cgcctcaacagcgaggcccgcagcagcgagctacgcgtcagcaccggcggcggaggcagc
ggcgggagtagccgctccgagctgcaggccgagctccacgggcagccgccgcgtcaccac
caccggctggagcgccagctctccaacgagcagctggtgcaggcgcggcgggacgagctc
ccgcaggagctgtggagggagagggccgagcgcgagaggaggctggagagacagacgtcc
agcgagctggagggggcgggcggcccagcgcagggccaggggcagggccacgaggcccgc
aggagggacaggcacagactggacagacaggagtccagcgacagggaacactcagacagg
cgctctacggaaaagaggtccactttagctgacatcgtggaacagctgcaggagagggag
gcagccgtggcccgaggggacatccctcgcctgcccaatggcctgcccgagaaggtgtcc
cgaccggaacggccgcgggcgcgagaccggcccaagcctcggcggagaccccggccgaag
gagcccagcggcggggaggtgcgggaggcgcggcgctcgcggtcagcgccggcgcagagc
agcccatccgtcccccagccgccatcgcacaccgcccagcacgagggcttcctgttccgc
aagctggacatcgagagcctgaagaaggccgccaacagcaggtcctgggccaacctctac
tgcgtgctgtccaagggcgagctgggcttctacaaggacgccaagaacaccgccacacct
tacaacaacgaacctcttctcagcctcagtggctgcatctgcgacgtcaacaacggctac
aagaagaagaagaatgtcttcacactcaagacaaaagatggaagtgaatttcttttccat
gcaagagatgaggatgatctgaagggctgggtctcaaacatcaccaaaagtatcaacgag
cacgaggagatcgccaagtggggtcagccccagcctactacctcttccacggacgagggc
acgcgccgcgatgccaggaagtcggaagcggagaagtcggagcggggcgagaagtcggat
cgcgaccgtgaccgggtctccgagcggtccgacaaaggcgagaaaccagagaagcgcacg
gggaagaagaagtga
DBGET
integrated database retrieval system
