Alosa sapidissima (American shad): 121684082
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Entry
121684082 CDS
T11137
Symbol
scn4ba
Name
(RefSeq) sodium channel, voltage-gated, type IV, beta a isoform X1
KO
K04848
voltage-gated sodium channel type IV beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04261
Adrenergic signaling in cardiomyocytes
asad04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121684082 (scn4ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121684082 (scn4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121684082 (scn4ba)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121684082 (scn4ba)
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GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
CadC_C
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
121684082
NCBI-ProteinID:
XP_041919945
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Position
15:complement(27157095..27205031)
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AA seq
230 aa
AA seq
DB search
MESQDTSRSFLHRCRTSPDRMGVSVLVTLLIGVWCAQALEMSVGKVGVIEALNGSTVLMP
CVYSSCIGIKNLYFSWSYNRTEPLCEGLIPMEGIDPHVVILNERVEFVGSSKTSNISIIF
KNITFEDAGDYICFGKNPKEKGRNHSATLTLIVVDELREVDNTLTVIIMSVVGGVIGFIV
LAMVIKSLVLHILGKVQEKNKECLVSSSGNDNTENGLSGSKADNKATPKA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacaggataccagccggtcatttttgcacaggtgcaggacctcgcctgacagg
atgggtgttagtgtgctcgtcacacttctaatcggtgtgtggtgtgcccaggctctggag
atgtctgtgggaaaggtgggcgtgatcgaggcgttgaacggcagcacagtgctcatgcct
tgcgtctactccagctgcattggcatcaagaacctctacttcagctggagctacaacagg
accgagccactgtgtgagggcttgataccaatggagggcattgatcctcatgtggtcatc
ctgaacgagcgcgtggagtttgtgggttccagtaagacgagcaacatctccatcatcttc
aagaacatcacctttgaggacgcgggggactacatctgcttcggcaaaaaccccaaggag
aagggccgcaaccacagtgccaccctgaccctcatagttgtcgatgaactgcgggaagtg
gacaacacactcaccgttatcatcatgtcagtggttggaggggtcatcggattcattgtc
ttagccatggtcatcaaatcccttgtgctccacattctcggcaaggtccaagagaaaaac
aaagagtgccttgtgagttcttcagggaatgacaacacagagaacggtctctccggctcc
aaagcagataacaaagcaacaccaaaggcatga
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