Alosa sapidissima (American shad): 121684130
Help
Entry
121684130 CDS
T11137
Symbol
pipox
Name
(RefSeq) peroxisomal sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00260
Glycine, serine and threonine metabolism
asad00310
Lysine degradation
asad01100
Metabolic pathways
asad04146
Peroxisome
Module
asad_M00974
Betaine metabolism, animals, betaine => glycine
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121684130 (pipox)
00310 Lysine degradation
121684130 (pipox)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121684130 (pipox)
Enzymes [BR:
asad01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
121684130 (pipox)
1.5.3.7 L-pipecolate oxidase
121684130 (pipox)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
GIDA
Pyr_redox_3
HI0933_like
FAD_oxidored
Thi4
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
121684130
NCBI-ProteinID:
XP_041920013
LinkDB
All DBs
Position
15:9548088..9573707
Genome browser
AA seq
386 aa
AA seq
DB search
MSSQIYDCIVIGAGIQGSCTAYYHAKNNKKTLLLEQFFLPHSRGSSHGQTRIIRKAYQQD
FYLRMMEESYKLWAELERDAGVQLYRCTGLLVMGPEDGQYYSAVKDVLQRNKVPTVMLKR
EEFNQHIPNFNLVSGENALVDTSAGVLYADKALASLQRLFQSHGGVIKDGEKVTGIKPGP
VVTVTTASGAYQAKSLVITAGPWTNTLLSHTGMALPLKVEKINVCYWREKVPGSYDVHNR
FPCFSRQDGPEVDQIIYGLSSNEYPGLMKVCYHIGKETDPDARDNQTDQSDIQVLQRFVA
RCMPGLVPVPAVVESCLYTLTPDNHFVLDCHPTYSNIIIGAGFSGHGFKFGPVIGKILYE
LSTGQVPSHNLSPFKITRFQTPKSAL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcaaatatacgattgcattgtgattggagcagggatccaggggtcttgtaca
gcgtactaccacgcgaagaataacaagaaaacgcttcttctcgaacagtttttcctgcct
cactctcgtggaagttcccatggccagacgcgaattatcaggaaggcctatcagcaggac
ttctacctccggatgatggaggagtcttacaaactgtgggccgagctggagagagatgca
ggtgtgcaactatacagatgcacaggcctcctggtcatgggccccgaggacggtcagtac
tactcggccgtcaaggacgtgctgcaacggaacaaagttcccactgtgatgctgaagagg
gaagagttcaaccagcacatccccaacttcaacctggtcagtggagagaacgcgctggtg
gacaccagtgcaggggtgctgtacgccgacaaagccctcgcctcccttcagaggctgttt
cagtcacatggtggggtgattaaagatggggaaaaagtaactggcatcaagccaggcccg
gtggtcacggtgacaacagcctccggggcatatcaggccaagagtctggtgataacagca
ggaccgtggactaacacgctgctctcccacaccggaatggccctgcctctgaaggtggag
aagataaacgtgtgctactggcgggagaaggttccgggctcgtatgacgtccacaatcgc
ttcccttgcttcagccggcaggacggcccggaggtggatcagatcatctacggcctttcg
tccaacgagtacccgggcctgatgaaggtgtgctaccacattggcaaggagacggaccca
gacgcgagggacaatcagacggaccagagtgacatccaggtcttgcagcgcttcgtcgcc
cgctgcatgcccggcctggtgcccgtgcccgctgtggtggagagctgcctctataccttg
acgcctgacaatcactttgtcctggattgtcaccccacttacagcaatatcatcatcggc
gctggattctcaggtcatggctttaagttcggcccggtcatcggcaagatcctgtatgag
ctgagcacagggcaggtgccctcccacaacctctccccgttcaagatcacccgcttccag
acccccaagtctgcactgtag
DBGET
integrated database retrieval system