Alosa sapidissima (American shad): 121684145
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Entry
121684145 CDS
T11137
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121684145 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121684145 (dhx36)
03012 Translation factors [BR:
asad03012
]
121684145 (dhx36)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121684145 (dhx36)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121684145 (dhx36)
Translation factors [BR:
asad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121684145 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121684145
NCBI-ProteinID:
XP_041920032
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All DBs
Position
15:complement(5720205..5746944)
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AA seq
1020 aa
AA seq
DB search
MSYGYGGRRGRRGGRRFGDGNEERWERGAGSSSGGYQRNSGNWESREEHGRGGGSGPRGK
HPPHLKGREIGLWYAKWGGVKRSEQERKSRAVVQMDQSREQHITELLNSVQRVPRGAGMD
TGASTSQCWRSKPQESHHSYFDGDEPPEEVPETKPVIKEIKQENETTWDKDLEFLFQDIV
RKPTLDQELKKDLQIKRTDTKYLDMLKFREKLPSYGMREELVQLIQASQVVVVSGETGCG
KTTQVTQFILDDYIERGMGSLCRVVCTQPRRISAISVAERVSAERAESVGNGNSCGYQIR
LQSRLPRKQGSVLYCTTGIILQWLRSDSHLSSISHLVLDEIHERNLQSDVLLTIVKDLLS
VRDDLKVILMSATLNAEKFSKYFGNCPMIHIPGFTYPVQEYLLEDVVEMIRYRPQKKERR
PRWKRGFMQGQVARPEKEQKEAEYQESWPCYARTLRDKYSDSTIDVMEMMDDDDRIDLDL
IAALIRHIVLNEDEGAILVFLPGWDNISGLNDLLMAQQMFKSDKFVIIPLHSLMPTVNQT
QVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTPEWVSLA
NAKQRKGRAGRVSPGKCYHLYNGLRASLLDSYQLPEIQRTPLEELCLQIKILKLGSIASF
LHKALDPPSEKAIELAITHLMDLNALDKEEELTPLGVHLARMPVEPHIGKMILFGALLGC
LDPVLTIAASLSFKDPFFIPMGKEKLADNRRRVLSKNSRSDHLTIVNAFWGWEDAKQRGY
RYEKDYCWDNFLSVNTLKMLHNMKGQFAEHLLTAGFVSCKDPKSPSANINSENEKIIKAV
IVAGLYPKVAKIRPSHNKKRPMPAKVYTKADGKVCIHPKSVNAEEREFRYTWLIYHLKMR
TTSIFLYDCTEVSPFSLLFFGGDISIQKDQDQETIAVDEWIVFQSPARIAHLVKNLRKEL
DFLLEEKIKNPKPVDWSNRSSKDCAVISAIIDLLTTQEADSRSGHTDWSAAPRDDDQYDY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggttatggtggcaggagaggacgaagaggaggtcgcaggtttggcgatgga
aacgaagagagatgggagcgtggagcagggtcgagtagtggaggttatcagaggaactcc
gggaactgggaatcacgggaggaacatggacgtggaggaggaagtggtccacggggtaaa
catcctccacatctgaaaggcagagagattggcttatggtacgccaaatggggtggtgtg
aaaagatccgagcaggagaggaaatccagagccgtggttcagatggatcaatcgagagag
cagcacatcactgaactactaaactcggttcaacgagtgccccgcggagctggcatggac
acgggcgcttccacatcacagtgctggaggtccaagccacaggagagccatcacagttac
tttgatggggatgaacctcctgaggaagtacctgaaacaaaacctgtaattaaggaaatc
aagcaagaaaatgagacgacctgggacaaagatctcgaattcctgtttcaggacatagta
cgcaagccaacccttgaccaagagctcaagaaagacctgcagataaaaaggactgacact
aaatatctagatatgttgaaattccgggaaaagctcccatcatatggaatgagagaggag
ctggtgcagctaatccaggctagccaggttgtggtggtcagcggggagactggctgtggg
aagaccactcaggtcacacagtttatcctggacgattatatcgagagaggcatgggctct
ctctgcagggtggtatgcacccagccacgccggatcagcgctatctcggttgcagagagg
gtgtctgcggagcgggctgagagcgtgggcaatggaaactcttgtgggtaccagatccga
ctgcagagccggttaccacggaaacaaggctctgttttgtattgtacaacgggcattatt
cttcagtggctccgctctgattcacacctgtccagcattagccacctggttctggatgag
atccacgagcgaaacctacagtctgacgttcttctcaccatcgtgaaggacctgctgtcg
gtccgggatgacctgaaagtgattctcatgagtgctacgctcaacgcagagaaattcagc
aagtactttggtaactgcccaatgattcacattcctggcttcacatacccagtccaggag
tatctgctggaggacgtggtagagatgatcaggtaccgacctcagaagaaggagcgcagg
cccaggtggaagcggggcttcatgcaaggccaggtggcgcgtccagagaaggagcagaag
gaggcagagtaccaggagagctggccctgctacgcgcgcacactcagagacaagtactca
gacagcaccattgacgtaatggagatgatggatgacgatgacagaattgacctggatttg
atcgcagcactcatccgacacatcgtgctgaatgaggatgaaggagccatactggtcttc
ctgcctgggtgggacaacatcagtggtcttaatgacctccttatggctcagcagatgttc
aagtcagataagtttgtgataattccactccactctctcatgcccacggtcaaccagacc
caggttttcaaaagacctccacctggagtccggaagattgtgattgccactaacattgct
gaaaccagcatcaccatagatgacgtggtgtacgtaatagatggtggcaagattaaggag
acccactttgacacccagaacaacatcagcaccatgacacccgagtgggtgagcctggcc
aacgccaagcagaggaaagggcgcgctggcagggtgtctccagggaagtgttaccacctg
tacaacggcctgcgggccagcctgctggacagctaccagctgcccgagatccagcgcacc
ccactggaggagctgtgcctgcagattaagattctcaagctgggctccatagcctccttc
ttgcataaggctttagaccccccctcagagaaggctatcgagctggccataacacacctc
atggacctgaacgctcttgacaaagaagaggagctgacccctctgggtgtccacctggcg
cggatgccagtggagcctcacatcggcaagatgattctgttcggagcgttgctcggctgc
ttggaccccgtgctcaccatcgccgccagcctcagctttaaagaccccttcttcattcca
atgggaaaggagaagctggcagacaacaggaggagagtcctttccaagaactccaggagt
gaccatcttactattgtgaatgcattctggggctgggaggatgctaaacaacgaggctac
agatatgagaaagactactgctgggacaactttctatctgtcaacacactcaagatgctt
cacaacatgaagggccagtttgcagagcacctgctgactgccggctttgtcagctgcaag
gaccccaaatcccccagcgcaaacatcaactcagagaatgagaaaatcataaaagcagtc
attgtagctggtttgtatccgaaggtggccaagatccgacccagccacaacaagaagagg
cccatgccggcaaaggtgtacaccaaagcggatgggaaagtgtgtattcaccccaaatct
gtgaatgcagaggagagagagttccgctacacatggctcatctaccacttgaaaatgagg
acgaccagtatcttcctgtacgactgcaccgaggtgtctccattctccctgctcttcttt
ggcggggacatctccatccagaaggaccaggaccaggagaccatcgccgtggacgagtgg
atcgtcttccagtccccggcacggatcgcccatttagtcaaaaacctaaggaaggagctg
gacttcctcctggaggagaaaatcaagaacccaaagccggttgactggagtaaccgcagc
tccaaagactgtgcggtcatctccgccatcatcgacctgctcaccactcaggaggccgac
agcaggagcggccacacagactggagcgctgcccctagagacgacgaccagtatgactac
tga
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