Alosa sapidissima (American shad): 121684170
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Entry
121684170 CDS
T11137
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b
KO
K06081
poliovirus receptor-related protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03266
Virion - Herpesvirus
asad04514
Cell adhesion molecule (CAM) interaction
asad04517
IgSF CAM signaling
asad04520
Adherens junction
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
121684170 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121684170 (nectin1b)
04517 IgSF CAM signaling
121684170 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121684170 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121684170 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121684170 (nectin1b)
04090 CD molecules [BR:
asad04090
]
121684170 (nectin1b)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Nectin family
121684170 (nectin1b)
CD molecules [BR:
asad04090
]
Proteins
121684170 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Ig_PVRIG
Glyoxalase_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121684170
NCBI-ProteinID:
XP_041920070
LinkDB
All DBs
Position
15:5090543..5139330
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AA seq
498 aa
AA seq
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MAMWESFWIIGLVLATSAQEVMGQSVQMDSIKSGFVGSTVELRCQFMNSRPPVKISQVTW
QKFLNGTKQNVAIANPALGVSVLPPFKDRVSFKNPAVRQRTPSLEDTTIVFNNLRLSDEA
AYICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIIARSQKRKMTVATCVSANGKPPS
VIKWETKLKGEFNLQETRNPNGTVTVRSSYIVTPSRETHRQKLTCIVTYRNERITDSVIL
NVQYEPFVQIEGFDGNWYLNRQDVQLTCNADANPAVTIYQWKLLNGSLPNNVEIKNNTLF
FKGPVTYDLAGTYVCDATNSIGTRSGRVEVNVTDYPNNPPSREMPQEQPNKGVYIGVAVG
GVALLAAVSTLLFVFLRRRQRTFKGDYSTKKHVFGNGYSKASGLPAHPPIPKNLQYPDDS
DDEKKPAQIGGSGGYEGDRDFEGESEDLKRPYFTVDEGESRDFDDRTLAYQYDPEPEIAD
DMVSQTDGSVISKKEWYV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgggaaagtttttggataataggcctagtcctggccacgagtgctcaagag
gttatgggtcagagtgtacagatggactccattaagtcaggctttgtgggctctacagtg
gagctgcgttgccagttcatgaacagcagaccccctgtgaagatctcccaggtcacctgg
cagaagttcctgaacggcaccaagcagaacgtggccatagccaaccctgcattgggtgtg
tctgtgcttccgcctttcaaagaccgtgtcagcttcaagaacccagccgtccgccaacgc
acaccctctctggaagacaccaccattgtgttcaacaacctgcggctgtctgacgaggcg
gcgtacatctgcgagtacaccacttttcctgctggcaacagggaaaacatggtcaatctg
actgtctttgcacgacctttgacccgcatgaccctcaccacaccaacaatcatcgcacgg
tcacagaagcgaaagatgaccgtggccacctgtgtgtcggccaatgggaaaccgccaagc
gtcatcaagtgggagaccaagctgaagggcgagttcaacctgcaggagacgcgcaatccc
aatggcaccgtcactgtgcgcagtagctacattgtgacgcccagccgcgagacccaccgg
cagaaactcacctgcatcgtcacctaccgcaatgagagaatcactgacagcgtcattctc
aatgtgcaatatgagccttttgtccagattgaaggtttcgatggaaactggtatttgaat
cgtcaggatgtccagctcacctgcaatgctgacgccaacccagccgtgaccatctaccag
tggaaactcttgaacggatcattgcccaacaatgttgagatcaaaaacaacaccctgttc
ttcaagggcccagtgacgtatgacctggctggcacttatgtctgcgacgccacaaacagc
attggtacccgctcgggacgggtagaagtcaacgtgacagactaccctaacaacccacca
tcccgtgagatgccacaggagcagcctaataaaggtgtttacatcggggtcgctgtgggc
ggagtggcgttgctggccgcggtcagcacgctgctctttgtgttcctgcgccggcgccag
cgcacctttaagggtgactacagcaccaagaaacatgtctttgggaacggctacagcaaa
gccagcggcctgcccgcacaccccccaatcccaaagaacctgcagtaccccgacgactcg
gatgacgagaagaagccggctcagatagggggctcagggggctatgagggcgatcgggat
tttgaaggtgaatcggaggatttaaagaggccctacttcactgtggacgagggcgagagc
cgcgatttcgatgaccggactctcgcttaccagtatgaccctgaacctgagatagctgat
gatatggtctctcaaaccgacggctcggtcatttcaaagaaagagtggtatgtctag
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