Alosa sapidissima (American shad): 121684198
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Entry
121684198 CDS
T11137
Symbol
myo1cb
Name
(RefSeq) myosin Ic, paralog b isoform X1
KO
K10356
myosin I
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121684198 (myo1cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121684198 (myo1cb)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121684198 (myo1cb)
03036 Chromosome and associated proteins [BR:
asad03036
]
121684198 (myo1cb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121684198 (myo1cb)
04147 Exosome [BR:
asad04147
]
121684198 (myo1cb)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121684198 (myo1cb)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Phagocytosis
Others
121684198 (myo1cb)
Others
Actin-binding proteins
Myosins
121684198 (myo1cb)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121684198 (myo1cb)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121684198 (myo1cb)
Exosome [BR:
asad04147
]
Exosomal proteins
Proteins found in most exosomes
121684198 (myo1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
AAA_22
Zeta_toxin
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121684198
NCBI-ProteinID:
XP_041920093
LinkDB
All DBs
Position
15:22720165..22765855
Genome browser
AA seq
1068 aa
AA seq
DB search
MMELKIQLIPTGEIILSPGKNGESYCHNCKAVGVDGVRAMMESALTARDRVGVQDFVLLE
NHTSEVAFIENLRKRFKENLIYTYISSVLVSVNPYKELEIYTKQHMERYRGVNFYEVSPH
IYAVSDNAYRSMRTERRDQCILISGESGAGKTEASKKVLQYYAVTCPASDHVQTVKDRLL
QSNPVLEAFGNAKTLRNDNSSRFGKYMDIQFDFKGAPVGGHILNYLLEKSRVVHQSHGER
NFHIFYQLIEGGEEDLLRRLGLERNTSQYQYLVKGNCPKVSSINDRSDWKVVLKALTVIG
FSDDEVEELLNIIASVLHLGNVQFGSEDSGSAWITSETQIRYMSRLIGVDVAVLKEALTH
KKIIAKGEELMSPLNQEQAAAARDALSKAVYGRTFSWLVNKINDSLAFKDDSRLSSKNAS
VIGLLDIYGFEVFQNNSFEQFCINYCNEKLQQLFIELTLKSEQDEYEAEGITWEPVQYFN
NKIICDLVEEKFKGIISILDEECLRPGDATDITFLEKLEETVGGHAHFVTHKLADGKTRK
VMGREDFRLLHYAGEVNYNVNGFLDKNNDLLFRNLKEVMCRSENKILTQCFDREELTDKK
RPETTATQFKTSLAKLMEILMSKEPSYVRCIKPNDAKQAGRFDEVLIRHQVKYLGLMENL
RVRRAGFAYRRRYEIFLQRYKSLCPETWPSWNGRLVDGVSTLVKHLGYKPEEYKLGRSKI
FIRFPKTLFATEDALETRKHSIATKLQSAWKGYSQKTKYRKLRSNAIVIQAWWRGILACK
KAQRRRQAADTIRKFIKGFIYRHQPRCPENEYFLDYVRYSFLMKLHRSLPKTVLDKSWPT
PPPALAEASEHLRKMCMQNMVWKYCKSISPEWKHQMEQKMVASEIFKDKKDNYPQSVPKL
FVGTRLNGEDINPKVLQALGSEKMKYAIPVTKYDRKGYKARSRQLLLTANCVVIVEEAKL
KQRVDYNSLKGISVSSLSDGVFVLHVPCEDNKQKGDVVLQSEHVIETLTKLAICADKINS
ININPGSITFTGGPGKEGIIDFTAGSDLLIAKAKNGHLSVTAPRLNSR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgaagatccagctgatccccacgggggagatcattctgtctcccggaaaa
aatggagaaagctactgccacaactgcaaggcggttggcgtagacggggtgcgggcaatg
atggagagcgccctaacagccagagaccgggtgggcgtgcaggactttgtcctgctggag
aaccacaccagcgaggtggccttcatagagaacctgcgcaagaggttcaaggagaacctc
atctacacatacattagctcagtgttggtgtcggtgaacccgtacaaggagctggaaatc
tacaccaagcagcacatggagcgataccggggagtcaacttctacgaggtctccccccac
atttatgctgtgtcggataacgcataccgctccatgcggaccgagcggcgggaccagtgc
atcctcatctccggcgagagtggcgccggtaagacggaggcctccaagaaggtgctacag
tactacgccgtcacctgccccgcgagtgaccatgtgcagacggtcaaggaccgcctcctg
cagtccaaccccgtcctggaggctttcgggaatgccaaaactctgcgcaacgacaactcc
agtcgcttcggaaagtacatggacatccagttcgatttcaagggcgctccggtgggcggc
cacatcctgaactacctgctggagaagtcgcgcgtggtgcaccagagccacggcgagcgc
aacttccacatcttctaccagctcatcgagggcggcgaggaggacctgctgcgcaggctg
ggcctggagcgcaacacctcacagtaccagtacctggtcaagggaaactgccccaaagtg
agctccatcaacgaccgcagtgactggaaggtggtgctgaaggccctgactgtcataggc
ttcagcgacgatgaggtggaggagctgctcaacattattgccagcgtgcttcacttgggg
aatgtccagttcggatcagaggacagtgggagtgcgtggatcacgtctgagacgcagatc
agatacatgtccaggttgataggagtggatgttgctgttctgaaggaggctctcacacat
aagaagatcattgccaaaggcgaggagctgatgagccctctaaaccaggagcaggctgca
gcagctcgggacgccctctccaaggccgtgtatggccgcaccttctcctggctggtcaac
aagatcaacgactctctggcattcaaggatgactcacggctctcaagcaagaatgcctct
gtgattggtcttctggacatctatggtttcgaagtcttccaaaacaacagttttgagcag
ttctgcatcaactactgcaatgagaagctccagcagctcttcatcgaactcaccctgaag
tctgagcaggatgagtatgaggctgagggaatcacgtgggagcctgtgcaatatttcaac
aacaagatcatctgcgatcttgtggaggagaaattcaaaggcatcatttccatcttggat
gaggagtgcctcaggcctggagatgccactgatatcaccttcctggagaagttggaggaa
actgtagggggacatgctcatttcgtaactcataagctggccgatggaaagacccggaag
gtcatgggccgggaagacttcaggctgctgcactacgctggagaggtcaactacaatgtg
aatggttttcttgacaagaacaacgacctcttgttcaggaacctaaaggaggttatgtgc
cggtcagaaaacaagatcctcacccagtgcttcgacagggaggagctgaccgacaaaaag
cgtccagaaacgacggccacccagttcaagaccagtctggcgaagttgatggaaattctg
atgtcgaaggagccgtcgtacgtccgctgcatcaagcccaacgatgccaaacaagcaggt
cgttttgatgaggttctgatcaggcaccaggtgaaatacttggggctgatggagaacctg
agggtgagaagagctggatttgcataccgtcgacgctatgagatcttcctgcagagatat
aagtccctgtgtccagagacctggcccagctggaatggccgtctggtagatggagtgtct
acactggtcaaacacctcggctacaagccggaagagtacaaattgggcaggtctaagatc
ttcatccgattcccaaagactctgtttgccactgaagatgcgttggaaacaaggaaacac
agtatagctaccaaactgcagtcagcctggaaaggctacagccaaaagaccaagtaccgc
aaactgaggagcaatgccattgtgatccaggcatggtggagaggaatcctggcctgcaag
aaagcccagcgcaggaggcaggcggccgacactatccgcaagttcatcaagggcttcatc
tacagacaccagcctagatgcccagagaatgagtacttcctggattatgtgcgctactct
ttcctaatgaaactccacaggagcctgcccaagaccgtgctggacaaaagctggcccact
cccccacctgccctggctgaggcatcagagcatctgcgcaaaatgtgcatgcagaacatg
gtgtggaagtactgcaagagcatcagcccagaatggaaacaccaaatggagcagaaaatg
gtagcaagcgaaatcttcaaggacaagaaagacaactaccctcagagtgtccccaaactc
tttgtgggcaccaggctcaatggagaggacatcaaccccaaggtgctccaggctcttgga
agtgagaagatgaagtatgcaattccagtgaccaagtatgacaggaaaggatacaaagcg
cgctcccggcagctgctcctcacagcaaactgtgtcgtcattgtggaggaagccaaactg
aagcaacgcgtcgactacaactctctgaaaggaatctcagtgagttccctcagcgatggc
gtctttgttctgcatgtgccatgtgaggataacaagcagaagggggatgtggttctccag
agtgaacatgtcattgagactctgacaaaactggcaatctgtgccgacaaaatcaacagc
atcaacatcaacccggggagtataacattcacagggggtccaggaaaagaagggatcata
gacttcactgctggctcagacctgctcattgccaaggccaagaatggacacttatctgtg
actgctcctcgcctgaactcaagatga
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integrated database retrieval system
