Alosa sapidissima (American shad): 121684402
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Entry
121684402 CDS
T11137
Symbol
zgc:114130
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36
KO
K18753
butyrate response factor
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121684402 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121684402 (zgc:114130)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121684402 (zgc:114130)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Torus
zf-CCCH_UNK-like_4th
Med13_N
Zn_finger_prot
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
121684402
NCBI-ProteinID:
XP_041920351
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Position
15:complement(27840342..27844448)
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AA seq
442 aa
AA seq
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MPSYALNQFIDLDEVLCKQLLSLDLREPPKMSALPVSPVGHKKIRPSCSFSSSSSSCLSD
SKVNAAGTTGHWGQPADIPLPSNWNKMSFWAERSVSMVEGSTSSLGWASTEPGSCKPASA
SSCTSLPSVSMAASTAASTTSSRYKTELCRTYAERGMCKYGSKCQFAHGLEELRDLNRHP
KYKTEPCRTFHSVGFCPYGIRCHFVHNNEDDDHAHAHTRPKQFSSSSSTGRVPSQRPPLL
KQSFSFAGFPSNHPPPAMDPTLPHAYLRAPSLSPPASSDLSELLSLAFHDVDVASASLVA
AAAAATAAALEASVCDPQPQFLPSPDSGCSSCSLASSSALPPPHTQPAGAGREVPAAEPN
RRPRGHADRRLLLLHCQGVRSLSHTSLSDHEGGCGSSASSLSGSDSCASGFEGVGKRLPI
FSQLSVPDDGFFSEGSSTGFFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtacgctctaaatcagtttattgatttggatgaagttctgtgcaagcagctt
ctcagtcttgacctccgggaacctccaaagatgtctgccttgccagtttcaccagtcgga
cacaaaaaaatcagaccctcctgttccttctcctcctcctcctcctcgtgcttgagcgac
tccaaagtcaacgctgcggggaccactggccattgggggcagcccgccgacatccctctt
ccctcaaactggaacaagatgtcattctgggccgagcgttctgtcagcatggtggagggc
agcaccagcagcctgggatgggcctccacagagcccggcagctgcaagccggcctcagcc
agctcctgcacttccctgccgtccgtgtcgatggcggcatccacagccgcgtccaccact
tcgtcgcgctacaagacagagctgtgccgcacgtatgccgaacgcggcatgtgcaagtac
ggcagcaagtgccagttcgctcacggcctcgaggagctgcgcgacctcaaccggcacccc
aagtacaagacggagccgtgccgcacgttccactcagtgggcttctgtccgtacggcatc
cgctgccactttgtacacaacaacgaggacgacgaccacgcgcacgcacacactcgcccg
aagcagttttcctcttcctcctcaacaggccgtgtcccatcccagcgtccccctctcctc
aaacagagcttcagcttcgctggcttcccctccaaccatccaccgcccgccatggacccc
accctgccccacgcctacctgcgcgccccatccctctcgccgccggcttcgtccgacctc
tccgaactgctctcgctcgccttccacgacgtggacgtggcctctgcctccctggtagcc
gcagcggcggcagccaccgccgcggccttggaggccagcgtctgcgatccccagcctcag
ttcctgccctcgcctgactctggctgctcctcctgcagcctggcctcctcctcggcgctc
ccccccccccacacacagcctgctggagccggccgagaggtgcctgcagcagagcccaac
cggaggccccggggccatgctgaccgccgcctcctcctcctccactgccagggggtgcgg
agcctctcccacacgtcactctccgaccatgagggcgggtgtggtagctctgccagcagc
ctgagcggctcggattcctgcgcctcggggttcgagggcgtcggcaaacggctgcccatc
ttcagccagctgtccgtgccggacgacggcttcttcagtgagggcagcagcacaggcttc
ttcctgtag
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