Alosa sapidissima (American shad): 121684423 Help Entry 121684423         CDS       T11137                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism asad  Alosa sapidissima (American shad) Brite KEGG Orthology (KO) [BR:asad00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:asad04515]     121684423 Cell adhesion molecules [BR:asad04515]  Cadherins   Cadherin related    121684423 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  121684423 NCBI-ProteinID:  XP_041920398 LinkDB All DBs Position 15:complement(17474106..17581286) Genome browser AA seq 3301 aa AA seqDB search MKTARKGSETSRMDILHRESSWSRRTLLLLYVALELITVHCSTVMGALELQLDEEQPAGT IVGDISAGLPPGTTAYLYFISDHEGTGVGSDLDIDENTGIIKTAKVLDREVRDRYNFIAV TMTGITVEVTIVVNDINDHAPTFPRKRATFKIPEQTAIGTRFPLEPAVDADKDQLTTQGY LIKDGNDGQAFLLETKRGSNHVLYLDLVVNTILDREKRSTYTLLLEAFDSGSPKKTGQMI LDVTVQDINDNAPVFNQSRYHATISENLQPGNNIVQVFASDADEGDNGLVLYEINRRQSD PDRYFVIDSRSGIITLNKALDYEMRRVHELVVQARDNATQPEITNAFVTINVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGEGKFALTTKDSI IYLMCVDQILDREERDSYQLRVMATDSGTPPLRAESSFTIQVTDVNDNPPFFDQQVYTQV IPEVVFPGSFVVQVTARDKDQGPNGDIHYSILQDHGTHEEWFGIDTVTGIITTLAQLDYE VDPKPTVTVVATDGGKPPLSSTAVVNIVLQDINDNEPVFEKNFYNVSIKENTSAGTCFLE VTATDADGGSFGSISYSLGSVMGSTAHTQFTIGKETGQICTAVALDRDQGQSVYDFTVTA VDGGGLNSVAYVRVDLLDVNDNRPTFYPLQYSVNLSTQSAPGTSVVKVIAHDPDAGVNGR VTYRVLPGGGSPFFTLNKDTGVISLSRSLHGKANTVIPMVISAQDGSGLTALANARVNIS VVAGLVAPPVFEQANYYFTVTEDALRGTEVGVVRANTKIGPPKDISYTISSGDPTGYFTV DPETGALRTARPLDQEVQQQLELEVQARSGNPPAFGQTRVRVTVIDVNDNAPVFLPSSSE SLLLAEGTELGSVVYRAQAEDRDTGANGAVIFDLHAVAPAGQAPPQQQTFSINRGNGEIR LTGRLSYEAAPRHDLRVIAKDGGAPQQSATMTLVVHVQAENAQGPVFDTLTYRVELREGT ALNTRFLQVRALSRDSGTSSASSSSPSSPLAYHLHPDGDAVGFGIAPDSGWLFVKSALDR EAKEMYLLTVVATSGHGQLKKTGSATVRVSVMDENDNPPRLSQERAFLAVRENLPVGSGF GHISATDRDAGLNSRLSYRLLHSDRHFQINSQTGEISTRTALDREHQSSYQLVVVVQDGG TPARSATGTAFITVLDENDNAPSFSHSQPGRDIFLQVMEGQPSGVVIGTIQAKDPDEGEN GTVVYSMSGPRAERFSLNPNTGELRSSSALSHSDRAEYTFTLTATDRGLPPQSTSCGLRI QVLSSSKGKAKANSRSVSLTSTEGAKPGSVIGSVRSHDAQELPETGQVTYTVVGGTDRDG TFVVDRLTGDVYLARELDYERDSRYSIHIEVVDFSSALPSSHMVLLDIDVQDSNDHAPHF PEDPVTIVISESTEPGTPVYTFQASDGDGSGPNSELHYTIQQQWPADPGLLDLDPNTGVL SLGMPLDHETTSSLVLVVQATDSPLNASQRRLGSVTARLFVTDENDNAPVFASPSAVSVM EDQPVGFVVLYVMARDADQGENGRVSYRIQTGDSAGKFSLNPSTGSLSILKPLDREEQDL YNLTVIAEDHGMPQHSTTQVLSVQVIDVNDEVPWFEESQYEAFVTENQPAGFSVLVVSAS DLDQGTNGLVTYGISGEDGFSIHPTTGIITTSKALDRETQELYTVTVYAKDGGLPPNFAK ATVKITVLDENDNSPVFGRVYYSLDVPENQESVVLFTLRATDQDTGDSGEITYKITEGDL MGDFRLERGTGVLSTSRPLDREKKAKYALTIMAIDQGTPPRSASTIVEVAVLDINDNSPL FQSSSYTIDVSEDTPESSPVLEVTATDADEGPNGQVLYYLSKEAEGMFLVDEQSGRIFTA APLDREKKVSYTFQVWAVDSAPAAPRNSTAQVAVHLLDVNDNSPFFVQDPLVINISSAQA QGHRTLATMRAEDKDFGANGSVFYRFATPVRGFAINSLTGAIQATENLQGLTQSQRTLIV EAMDQGSPAQSSFGVVVVYVREQPYRGIRFSRNTRDVSLQENAAQGTVVVQTQAQYPDGS RNGISYSIFSGNKLQSFGISATSGEIWVQNSVGLDFEETPRIRLVVKAETASSSSFMAVN LILQDVNDNLPRFQLQNYVAYVREAQGYDHPIIQVMADDLDQGQNGQVTYSIRSSSMSGL FKIDPLTGSITTAAIMDREIWTQTKLVVTATDRGTPRLAGSATLTVIVVDLNDNSPTIPI PREVRVPENTMIGTVITQVTGNDVDSGPALSYSLHLDSYAQGKFGIHRYGGGVSLTAPLD FEERTWYTLTIRSSDSQHYSEANLTILVEDVNDNAPTFTQDLYQVTLPEHSPTGSAVITV TATDKDTGENGKISYRVMSSTRDIFYIDPNNGTLFINQRAEFHSERPSILVVIEAQDGGS PPLSAFTTVQVRVSDVNDNAPMFQQSEYRTTVSEDELPGATLLNLEAVDGDMSRENCGFD FAIASGNTGNAFQIESSVRFLEGRGFQTVGSLVLADRLDFEALPSYNLTIVASDRGIPQR SSSVPVLVTVTDANDNPPAFSRAEYSVVLSENAAAGTEVLRLSAVDPDSNPSGEVNYVIS SGDDTALFSLDKRTGALRLKRSLDSERQSSHMLIVQASDGRGHFALAPVIVEVKDINNNK PYFPLKKLTASIRENQPQNALVTMLHAIDHDNGMFGQLKYFMMDKSGDGKDSFLVNQTSG EIRARFTFDFEKVNSFSFVAIAMDAGNYSASVTVQVYVTGEDEYDPVFTTSDLAFHVPEG ARKGQSIGQVHAKDEDSGVDGIVLYSLADNSPYFEVNTSTGVISLKMDSYSRHVSRSKRE TRQMTLDVIAHSPLETSRVTTARLTIDVTHTAFGLATDVNMLLISIIAVSLAMVIILIVI AVALFLFRSRRQKEREERERISSSGTVLQKLDETKVDRNDRIYHQTLPGYAPETRVDPGT GGGPYTRGGSLDPSHSSGRGSAEAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPDSG IQQDADQLSDISCEPGMDANQWFKGKKLGSLSGTLLSGQLPVYRDEGGGYLGVGRGLSIS HPKDYAFPEDGKPAVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKD ESAPPNPRRPFQPKAKPDPKPRIDPPPLITNVAHPGAKTVPPKPAVGRTFPQLASLRRSP LSNDGSISSVAMSPSFSPSLSPLAARSPAISPFGVTQGPPASLISTTEHSLEHSEEAELR I NT seq 9906 nt NT seq  +upstreamnt  +downstreamnt atgaagacagcacgtaagggttcggagacgtcgagaatggacattctacatcgagaatcc tcgtggagccggaggactctgctgcttctctacgtggctctggaacttatcactgtccac tgctccaccgtgatgggcgcactggagctgcagctggacgaagagcagccggcgggcacc atcgtcggcgacatcagtgctgggttgccccccggcaccacggcgtacctctacttcatc tccgatcacgagggcacaggggtgggcagcgatctggacatagatgagaatacgggcatc attaagacggcgaaagtgttggatcgcgaggtcagggaccggtataactttattgccgtc acaatgacaggaattacagtggaagtcacgattgtggttaacgatatcaatgaccacgcg ccaacattccccaggaaaagagccacgttcaaaatccctgaacaaacagcaataggtact agatttccattggagcctgctgtcgatgctgataaggaccagttgaccacacagggatac ctgataaaagatggtaacgatggacaagctttcctcctggagaccaaaagagggtccaac cacgtgctttacttggacctggtagtcaacaccatcttggacagggaaaagcggtctacg tacactctcctgttggaggcttttgatagtggatctccaaagaagactggacagatgatc ttagatgtgactgtgcaggatatcaacgacaatgcccctgtttttaaccagagccggtac catgccaccatctctgagaaccttcagcctgggaacaacattgtacaggtgtttgcttct gatgctgatgaaggagataatgggctcgttctgtatgagatcaaccggaggcagagtgac ccagaccgatactttgtcattgattcccgctcggggatcatcactctaaacaaagccttg gactatgagatgagaagggtccatgaacttgtggtacaggcgcgagacaatgccacccag ccggagattaccaatgcctttgtcaccatcaatgtccgagactacaatgacaaccagccc accatgaccatcatcttcctcagtgaagatggatccccacggatctctgagggtgcccag cccggccagtatgtagcccgaatctctgtgactgaccctgactacggggagtacgccaac gtcaatgtctcccttgaggggggtgaagggaaatttgctctgaccactaaagacagcatc atctacctcatgtgtgtggaccagatcttggaccgcgaggagagggactcgtaccagctc cgcgtcatggcgacggactctggaacaccgcccttgcgagctgagtcctccttcaccatc caggtcactgacgtcaacgacaacccacctttctttgaccagcaggtatacacacaggtc attccagaagtggtgtttccagggagcttcgtcgtacaggtcacggccagagacaaagac caaggacccaatggggacatccattacagtatacttcaggaccatggaactcacgaggag tggtttggcatagataccgttaccggtataatcacaactctggcccaactggattacgag gtggaccccaagcccacagtgactgtggtggccactgacggtggcaagccccccttatcc tccacagcagtggtcaacattgtattgcaggatataaatgacaatgagcctgtcttcgag aaaaatttctacaacgtgtccattaaggaaaacacttcagctgggacctgcttcctagag gttacagcaaccgatgccgatggcggttcctttgggtcgatctcgtattccttgggttct gttatgggaagcacagcccatacgcaattcaccatcggcaaagagacgggtcagatctgc acagcggtcgccttggaccgggaccagggtcaatccgtctatgacttcactgtcactgct gtggatgggggcgggctgaactccgtggcctatgtgcgtgtggacctgctcgacgtcaac gacaaccggcccaccttctacccgctccagtactccgtcaacctgagcacgcagagcgcg ccgggcacctccgtcgtcaaggtgatagcgcacgaccccgacgctggcgtcaacggacgg gtgacgtaccgtgtactaccaggagggggctcaccattcttcacactcaacaaagacaca ggtgtcatctcactctcgcgctcgctgcatggaaaagccaacacggtcatccccatggtg atatcggcgcaggatgggagtggcctgacggcgctggcgaatgcacgggtcaacattagt gtggtggccggcctggtggcgccccctgtatttgagcaggcgaactactactttaccgtc accgaggatgccctgagggggacagaggtgggagtggtgcgggccaacaccaagattggt ccgcctaaggacatctcctacaccatcagctctggggaccccacgggctacttcacggtg gacccggagacaggagctctgaggacggcccggccgctggaccaagaggtgcagcagcag ctggagcttgaggtgcaggcgcgcagcggcaacccgccggcgttcggtcagacacgggtg cgcgtgacggtgatcgacgtcaacgacaacgcgcccgtgttcctgccgtcgtcgtctgag tcgctcctgctggccgagggcacagagctgggctcggtcgtgtaccgcgcgcaggctgag gaccgcgacacgggtgccaatggggcagtgatctttgacctccacgcggtggcgccggcc ggtcaagcgccgccgcagcagcaaacgttcagcatcaaccgcggcaacggcgagatccgg ctgacggggcgtctgtcgtacgaggcggcgccgcggcacgacctgcgcgtgatcgcgaag gacggcggtgcgccccagcagagtgccaccatgacgctcgtggtgcatgtgcaggcagag aacgcgcagggccccgtgttcgacacactcacctaccgcgtggagctgcgtgagggaacg gcgcttaacactcgcttcctgcaggtccgcgccctcagccgagactcggggacaagctcc gcctcttcctcgtccccctcctcgcccttggcctatcaccttcacccggacggtgacgca gtgggattcgggatcgctcctgacagcggctggctgtttgtaaagagcgcgctcgaccgc gaggccaaggagatgtacctgctgaccgtggtggccacctcgggccatgggcagctgaag aagacggggagcgccacggtgcgcgtgtccgtgatggacgagaatgacaacccgccgcga ctctcgcaggagcgcgccttcctggccgtgagggagaacctgccggtggggagcggcttc ggacacatctccgccaccgaccgggacgccggactcaacagccggctgagttaccggctg ctgcattctgaccggcacttccaaatcaactcgcagacaggtgagatcagtacccgcaca gccctggaccgtgagcaccagtccagctaccagctggtggtggtggtgcaggatgggggc actcctgcccgcagtgccacgggcacggcctttattacggtgctggacgagaacgacaac gccccctctttctctcacagccagccaggtcgagatatcttcctgcaggtgatggaggga caaccatctggagtggtaatagggactatacaggccaaggaccctgatgaaggcgagaat ggaactgttgtctactcaatgtcaggtccccgagcggagcgcttctcactgaacccaaac acgggcgaactgcgctcctcctcggccctcagccactcggaccgggccgagtacaccttc accctgaccgccacagaccgggggctgcccccccagagcaccagctgcggcctgcgcatc caggtcttgagctcgagcaaaggcaaggccaaagccaactcccggtcggtgtctctcacc tccacggaaggggccaaaccgggctccgtcattggctcggtcaggtcacatgatgcccag gaacttcctgagactggtcaggtcacctacacggtggtcggcggaacggaccgcgacggc acgtttgtggtagaccgactgacaggagacgtctacttggcgcgggagctggactatgag agggactcgcgctattcgattcacattgaagtggtggacttctcctcagccctcccaagt agccacatggttctgctggacatcgatgtgcaggacagcaacgatcatgccccgcacttc cctgaagaccccgtcaccattgtcatctcggaaagcacggagcctggcacgcccgtgtac accttccaggcctcggacggagatggcagcgggcctaacagcgagctgcactacaccatc cagcagcagtggcctgcagacccagggctcctggacctggacccaaacaccggggtgctc tccctgggcatgccgctggaccacgagaccacctcctccctggtgctggtggtgcaggcc accgactcgccgctgaacgccagccagcgccgcttgggctcggtgacagcgcgcctcttt gtcacggacgagaacgacaacgcgccggtcttcgcctcgccctctgcggtcagcgtgatg gaggaccagccggtggggttcgtggtgctgtacgtcatggcgcgcgatgctgaccagggt gagaatggacgcgtgtcctaccgcatccagacgggagactcggctggaaagttcagcctg aaccccagcactggttctttgtccatcctcaagccccttgacagagaagaacaggacctt tacaatctgaccgtcatcgctgaggaccatgggatgccccagcactccactacgcaggtg ctgtcggtgcaggtcattgacgtgaacgacgaggtaccctggttcgaggaaagccagtac gaagccttcgtcaccgagaaccagcctgcagggttctcagtgctggtggtctcagcttct gatctagaccaagggacgaacggcctggtgacctacggaatctccggcgaggacggcttt agtatccacccaacgaccggcatcatcaccaccagcaaagccctggacagagagacccag gagctctacactgtgacagtgtacgccaaggacggcggactcccgccaaattttgccaaa gcaacagtgaagatcacagtcttggacgagaacgacaacagcccagtgtttggcagagtg tactacagtctggatgtgcctgagaaccaggagtctgtagtactgttcacactgagggcc actgaccaagacacaggagacagcggggagatcacatataaaatcacagagggtgacctc atgggtgacttccgtctggagagaggtacaggagtgttgtccacttccagaccgttagac cgggagaagaaggctaagtatgcgctgaccatcatggccatagaccagggcaccccacct cgcagcgctagcacaatagtagaggtcgccgtcctggatatcaacgacaacagcccgctc ttccagagcagtagctacaccattgatgtctctgaggacactcccgagagctcaccagtg ctggaagtaaccgccacagatgctgacgagggccccaacggccaggtcctgtactacctc agcaaggaggccgagggcatgttcttggtggacgagcagtcagggcgcatcttcacggcc gcgcctttagaccgggagaagaaggtctcgtacaccttccaggtgtgggcggtggactcc gctccggccgccccgcgcaactccaccgcccaggtggccgtgcacctgctggacgtcaac gacaattcgcctttcttcgtgcaggacccgcttgtcatcaacatctccagtgcacaggca cagggccaccgcaccctggccaccatgcgggccgaggacaaggacttcggggccaacggg tccgtgttttaccgcttcgccacccccgtgaggggcttcgccatcaactcgctcacgggg gccatccaggccacggagaacctgcaggggctgacgcagagtcagcggacgctgatcgta gaggccatggaccaggggagcccagcccagtcgtcatttggagtggtggtggtgtacgtg cgggagcagccgtaccggggaatccgcttctcacggaacacccgcgacgtgagccttcag gagaacgcagcccaaggtactgttgttgtgcagactcaagctcagtatcctgatggctct cgcaatggcatcagttacagcatcttcagtggcaacaagcttcagtcctttggaattagt gccactagtggtgaaatttgggttcagaactctgtgggtcttgactttgaggagacgccc aggatccgtcttgtggtgaaagccgagactgcatcctccagctccttcatggctgtcaac ctgatccttcaggacgtcaatgacaatctgccacgtttccagctgcagaactatgtggca tatgtcagggaggcacagggctatgatcaccctatcatccaggtaatggcagatgacctc gatcagggtcagaacggtcaggtgacctactccataaggtcgtcatccatgagtgggctt ttcaagatcgaccctttgaccggcagcatcacaacagctgctatcatggacagagaaatc tggacacagacaaaacttgttgtcacagcaactgaccgtggaacccccaggctggctggc tcggccaccctcactgtcatcgttgtggacctgaacgacaacagccccacgatccccata cctcgtgaggtgcgggtgccagaaaacacaatgattggcacggtgattacccaggtaaca gggaatgatgtggattctggcccggccctttcatattccctgcaccttgattcctacgca caggggaagtttgggatacaccgatatgggggtggggtgtctctgacagctcccctagac tttgaggaaaggacctggtacacgttgaccattcgctcctcagactcccagcattacagt gaggcaaaccttacaatcctggtggaagatgtgaatgacaatgcccccacatttactcaa gacctctaccaggtgacattaccagaacattctccaactggaagtgctgtcatcacagtg actgccacagacaaagacactggagagaatggaaagatctcttacagagtgatgtcatca acaagagacattttctacattgatcctaacaatggtacactgttcatcaaccagagagcg gagttccactctgagcgtccatccatccttgttgtgattgaggctcaggatggaggcagc ccacctctgagtgccttcaccaccgtccaagtccgtgtgtctgacgtcaacgacaacgct cccatgttccagcagtctgagtacagaaccacagtgtctgaggacgaactccctggggcc accctcctgaacttagaggctgtggatggggatatgtcccgggaaaactgcggatttgac tttgccattgccagcgggaataccggaaatgcctttcagattgagagcagcgtccgcttc ctcgagggccggggtttccagacagtcggctcacttgtgttggccgatcggctagacttc gaagctttgcccagctacaacctcaccatcgtggcttcggaccgcggcatcccccagcgc agctccagcgtgcccgtcctggtcacggtcacagatgctaacgataaccccccggccttc agtcgagctgaatacagcgtggtcctcagtgagaatgccgcagccgggactgaggtcttg cgtttgtctgccgttgacccagactccaaccccagtggtgaggtcaactatgtgatcagc tctggagatgacacggccctcttctctttggacaagcggacaggggcgttgcgtctgaag cgctccctggacagcgagaggcagtcatcccatatgctcattgtccaggcctcagacggt cggggtcactttgccctggctcctgtcattgtggaagtcaaggacatcaacaataacaag ccctatttccccttaaagaagctgacagcaagcattcgtgaaaaccaaccacagaatgct ttggtcaccatgcttcatgctattgaccatgataatggaatgtttggccagttgaaatat ttcatgatggacaaatcaggtgatggtaaagactcatttttagtcaaccagacctctgga gaaataagggcccgtttcacgtttgattttgaaaaagtgaactctttcagctttgtggcc atagcaatggatgcgggcaactactcagcctcagtcacagtccaagtatatgtgaccggt gaagatgagtatgatcctgttttcaccacgtcagatctcgcatttcatgtgcctgaggga gccaggaaaggacagagcatcggtcaggttcatgcaaaagacgaagacagcggtgtcgat ggtattgttctgtactctcttgccgacaactctccctactttgaggttaacacgtccaca ggggtgatatcactgaaaatggacagttacagcagacacgtgagccgctccaagagggaa actcgtcagatgaccctggacgtcatagcccacagccccttggaaacgtcgcgggtgacc actgccaggctaaccatcgatgtcacacacacagcttttggcctggccacagatgtaaac atgctgctcattagcatcatagccgtttccctggctatggtcatcatcttgattgtaata gccgtggcattattcttgttccggtccagacggcagaaggagagagaggaacgcgaaagg atatcttcttcgggcactgtattgcagaagctcgacgaaaccaaagtcgacagaaatgac cgtatatatcaccagacactgcctggttatgcaccggagacccgggtggacccaggaacc ggagggggtccctacacaaggggcggatctctggacccctctcactccagtggacgtggc tctgccgaagcagaggcagccgaggatgacgagatccggatgatcaacgagtacccgcga gtctccagcatctcctcctccatgcaggagcacatatccgctcgtgggcctgactctggc atccagcaggacgcagatcagctctctgacatctcctgtgaaccagggatggacgccaac cagtggttcaaagggaaaaagctgggaagcttgagcgggacccttttgtctggccagctc cccgtgtaccgagatgagggtggcggttacttgggagtgggacgggggctcagcatctcc caccccaaagactatgcttttccagaggatgggaagcccgccgtggacggctccctcacg gccattgtggctagcgatgaggagctgaggggcagctacaattgggactacctcctgaac tggtgcccccagttccagcctctagccaacgtcttcaccgagatcgctcgactcaaagat gagagcgctcctcctaacccgcggaggcccttccagccgaaggccaagcctgaccccaaa cccaggatcgaccctccgccactcatcaccaacgtggcccatccgggggctaaaacagtg cccccaaagcccgcggtgggccggactttccctcagctagcctccctacgccggtcaccc ctcagcaacgacgggtccatctcgtcagttgccatgtcgcccagcttctccccgtccctg tccccccttgctgctcgctccccagccatatcgcccttcggggtcacacaggggcccccg gcctccctcatcagcaccacagagcactctctggagcacagtgaggaggctgagctgagg atctag

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