Alosa sapidissima (American shad): 121684476
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Entry
121684476 CDS
T11137
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04020
Calcium signaling pathway
asad04510
Focal adhesion
asad04518
Integrin signaling
asad04540
Gap junction
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121684476 (pdgfd)
04020 Calcium signaling pathway
121684476 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
121684476 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121684476 (pdgfd)
04540 Gap junction
121684476 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121684476 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asad04052
]
121684476 (pdgfd)
Cytokines and neuropeptides [BR:
asad04052
]
Cytokines
Growth factors (RTK binding)
121684476 (pdgfd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
121684476
NCBI-ProteinID:
XP_041920474
LinkDB
All DBs
Position
15
Genome browser
AA seq
364 aa
AA seq
DB search
MQLSLFFVLLVGIHQSSKLVASSISFRSTQLRRDDSNHLTDLYRAEESLNVTGSGHLHSP
RYPSAYPRNLLLTWRLHSPADTRILLEFNSHFGLEESENDVCKYDYVEVEDISETSTIIW
GRWCGTKAPAHITSKTNIIKVTFKSDNYFVAKPGFKLHYSLLDDSPPITSQKNWEVITHS
MAAPLTYVSPVTERPLSMAELDKAIASFSTVEDMLRHLNPESWQEDMDSLYHDTSSQYRP
RAYHHDRKGKVDLDRLHEDVKRYSCTPRNFSVNLREELKATSAVFFPRCLLVQRCGGNCA
CGTDNWNSCTCTAGKTSSKLHEVLKFSPSPGYFRKRSRARWVLEEIHLVHDERCDCVCHD
RPPR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtcactgtttttcgtattgttggtcgggattcatcaaagctcgaagctggtg
gcttccagtatatcattccgatctacacagttaaggcgtgatgacagcaatcacctcaca
gacttgtaccgggcggaggagagcctcaacgtgacaggcagcgggcacctgcacagtccg
cgataccccagtgcctacccccgcaacctgctcctcacctggaggctgcactcgcccgca
gacacacgcatcctgctggagttcaacagccacttcggcctggaggagtccgagaacgac
gtctgcaagtatgactatgtggaggtggaggacatctcggagaccagcaccatcatctgg
ggccgctggtgcgggaccaaggcccctgcccacatcacctccaagaccaacatcatcaag
gtcaccttcaagtctgacaactactttgtggccaagcccggcttcaagctccattactct
ctcctggatgattctcctccaatcacctcacagaagaactgggaggtgatcacccactcc
atggcagctccattgacgtacgtctcgccggtgacggagcgtcctctgagcatggcggag
ctggacaaggccatcgcctccttcagcacggtggaggacatgctgaggcacctaaacccg
gagtcgtggcaggaagacatggacagcctgtaccatgacaccagcagccagtacaggccc
cgcgcctaccaccacgaccgcaaaggcaaggttgacctggaccgtctgcacgaggacgtg
aagcgctacagctgcacgccgcggaacttctcggtgaacctgcgggaggagctgaaggcc
accagcgccgtcttcttcccgcggtgcctgctggtccagcgctgcgggggcaactgcgcc
tgcggcaccgacaactggaactcctgcacctgcaccgccggcaagacatccagcaagctg
cacgaggtgctgaagttctcccccagtccaggttacttcaggaagcgctctcgagcacgc
tgggttctcgaggagatccacctggttcacgacgagcgttgtgactgcgtgtgccacgac
cgacccccgcgatga
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