KEGG   Alosa sapidissima (American shad): 121684495
Entry
121684495         CDS       T11137                                 
Name
(RefSeq) tripartite motif-containing protein 3-like
  KO
K11997  tripartite motif-containing protein 2/3
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121684495
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    121684495
SSDB
Motif
Pfam: NHL DUF4934 DUF5128 Filamin SGL zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 TEN_NHL zf-RING_2 zf-RING_5 zf-C3HC4_4 Invasin_D3 RING_XB3-XBAT31 Beta-prop_IFT122_1st YtkA Mala_s_1-like zf-ANAPC11 FapA Apolipoprotein Prok-RING_4 Baculo_PEP_C ATG17_like FTR1_4HB CRLF3_N Ig_GEX2_N TolA_bind_tri Histidinol_dh EF-G-binding_N Spectrin DUF8567 DUF7605 Muted NPV_P10 DUF6474
Other DBs
NCBI-GeneID: 121684495
NCBI-ProteinID: XP_041920495
LinkDB
Position
15
AA seq 773 aa
MSLTMAKRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCEKCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDPECAQPEACSVLESVSAASACQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKSALKNQLDAIRNR
LPQLTAAIDTVNDISKQLTERKNEAVSEINSTFEELERALHQRKGTLITDLENICSAKQK
VLQAQLAALLQGKENILSSCSFTEQALSHGSATEVLLVQKQMGERVAALAQHDFPERPHE
NGHLDCQVETEGLRRSIQNLGVLLTTAAVGHTSVATGEGLRHALVGQPATVTVTTKDKGG
ELVRTGNAELRARILTADGSTHAEADVADNKNGTYEVSYTMRAEGEFSFQLLLYRQPVRG
SPFRLRAVKASDVPQSPDDVKRRVKSPSGGGGGHVRQKAVRRPSSMYSTTKKKENPIEDE
LIYRVGTRGRERGEFTNLQGISASSNGRIVVADSNNQCIQVFSNDGQFKLRFGVRGRSPG
QLQRPTGVTVDTNGDIIVADYDNRWVSIFSSDGKFKNKIGAGRLMGPKGVAVDKNGHIIT
VDNKACCVFIFQSNGKLVTKFGARGTSDRQFTDKSGANNTLEQKLSKSGPVFSPHFVAVN
NKNEIIVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNS
RIQVFDSSGSFLSYINTTADPLYGPQGLALTSDGHVAVADSGNHCFKVYRYLQ
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgtctctcaccatggccaagcgtgagaccggcagcaccagccctgtggtgcggcagata
gacaagcagttcctggtgtgcagcatctgcctggatcactaccacaaccccaaagtgctg
ccctgtctgcacaccttctgcgagaaatgcctacagaactacatcccccctcagtccctg
acgctgtcgtgccccgtgtgccgccagacgtccatcctgcctgagaagggtgtggctgcg
ctgcagaacaacttcttcatcaccaacctgatggaggtgctccagcgcgaccccgagtgt
gcccagcccgaggcctgcagcgtgctggagtcagtcagcgcagcctccgcctgccagccc
ctctcctgccccaaccacgagggcaaggtgatggagttttactgcgagtcatgcgagacc
gcaatgtgcctggagtgcacagagggggagcacagagaacacgtgacggttccactgcgt
gatgttctagagcagcacaaatcagccttgaagaaccaactagatgccattcgcaacagg
ttgccacagctgacggcggccattgacacggtgaacgacatctccaagcagttgacggag
cgtaagaacgaggcggtgagcgagatcaacagcacatttgaggaactggagcgagcgctg
caccagcgcaagggcaccctcatcaccgacctggagaacatctgcagcgccaaacagaag
gtgttgcaggcccagttggcggcgctgctccaggggaaggagaacatcctgagcagctgc
agcttcacggagcaggcgctgtcgcacggcagcgccaccgaggtgctgctggtgcagaag
cagatgggtgagcgcgtggcggcgctggcgcagcacgacttccccgagcggccacacgag
aacggccacctggactgccaggtggagacggagggcctgcgccgctccatccagaacctg
ggcgtgctgctgaccaccgccgccgtggggcacacgagcgtggctacgggcgagggcctg
cgccacgcgctggtcggccagccggccactgtcaccgtcaccaccaaggacaagggcggc
gagctggtgcgcacgggaaacgccgagctgcgcgcacgcatcctcaccgccgacggctcg
acgcacgccgaggccgacgtggccgacaacaagaacggcacgtacgaggtgagctacacc
atgcgggccgagggcgagttctccttccagctgctgctctacaggcagcccgtgcggggc
agccccttccgcctgcgcgccgtcaaggcctcggatgtgccacagtcgcccgacgacgtc
aagaggcgggtgaagtcgcccagcggtggaggcggtggacacgtccggcagaaggcggtc
aggaggccctccagcatgtacagcaccaccaagaagaaggagaaccccattgaggatgag
ctcatctacagagtgggcacacgtgggcgtgaaagaggggagttcaccaacctacaaggc
atttctgcctccagcaatggtcgaattgtggtggctgacagcaacaaccagtgcatacag
gtcttctccaatgatgggcagtttaaactaagatttggggtcagaggtcgttccccaggg
caactgcagcgccccacaggggtgaccgtagatacaaatggtgacatcattgtggccgac
tacgacaaccgatgggtcagcatcttctcctcggacgggaagtttaagaataaaatcgga
gcaggaagactaatgggaccaaagggagtagcggtggacaaaaatggccacatcatcacc
gtggacaataaggcctgctgcgtgttcatcttccagtccaatggcaaactggtgaccaaa
tttggtgcgagaggaacatcagacagacagtttacagacaagagtggtgcaaacaataca
ctggagcaaaagcttagtaaatcaggcccagtgttcagtccacactttgttgctgtcaac
aacaagaatgaaatcattgtgacagatttccacaatcattccgtgaaggtgtacagtgct
gatggggagttcctgtttaagttcggctctcacggagagggcaacggccagttcaatgct
cccaccggggtggctgtggattccaatggcaacatcatcgtggcagattgggggaacagc
cggatacaggtgtttgacagctcaggttcctttctgtcttacatcaacaccactgccgac
cccttgtatggaccccaaggtctggccctgacctcggacggccacgtggcagtggctgat
tccgggaaccactgcttcaaggtttaccgctacctgcagtag

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