Alosa sapidissima (American shad): 121684643
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Entry
121684643 CDS
T11137
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121684643 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121684643 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121684643 (zgc:162872)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121684643 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121684643 (zgc:162872)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121684643 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
Ank_3
BAR
SOS1_NGEF_PH
PH_8
Motif
Other DBs
NCBI-GeneID:
121684643
NCBI-ProteinID:
XP_041920642
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Position
15:15312330..15326083
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AA seq
723 aa
AA seq
DB search
MDSFLDFEECIKDSPHFRASLDQCESDVAELESRVGKVMKMCTKMVEAGQAYNNSNQLFL
AALAEFSLYHKRDNVIMNCLRQFNQGLQEMIQFHTMLFDQTQRAITQQLTNLLSQFMPQI
KDTRREFVRIGEDLETAAAKNAQISRHKTTEAERASHLLIATRKCYQHFALDYCLQLNNF
KVQQKLDILNSVFSYFHAQYTFFHQGYDLLRDLEPTMKTMATQLAQLSTDCSSKRKDLEN
THLLVQQRDASGEPVVACTPADGGTIQGYLFKRSRRKNKTWKRCWFSTENNQLVYTKTHK
EKPTMLFDDLRLCAVKQLDSIDRRFCFELVSVQKCCALQADSEELRQAWINAVQGSIDMA
YRQKEEAQQPQPKESSPPVQAVVPPPGQPPPRQAVLGVALQGSGNQRCCDCGEEDPRWAS
VNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQMKLLCILGNDVVNGIYEECSSED
GIKKPTSHSPRQEKETWIKEKYVGKRFVRKANSCDSETVRREGGRRLYQAALQGDLVSMA
AALAHGAEVNWSDPQQEGRTALIGASIGGSLTACEFLLQNGANVNHRDQRGQGALHAAAI
GGHTGHVCLLLKRGANQYAADEKGNDPLSIAMETAHADIVTLLRMARMNEEMRDSEGFFG
SVGDDETFQDIFRDFSNMASHDPEKLSRRQFSKSADEDGEGNRLINDQHVEEDGGGGGAG
EDT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggattcttttttggatttcgaagaatgtattaaagattcaccgcatttcagggcctct
ctggatcaatgtgagagtgatgtagctgaattggagagccgagttgggaaggtgatgaag
atgtgtactaagatggtggaggctggccaagcatacaacaactctaatcagctgttcctg
gctgcattggctgagttttccttgtatcacaagcgggacaatgtcattatgaactgccta
cgccagttcaatcaggggctacaagagatgatccagtttcatacgatgctgtttgaccag
acccagagagccattacccagcagctcaccaacctgctctcacagttcatgcctcagata
aaggacacccgaagggaatttgtgcggatcggggaggaccttgagaccgctgctgcaaag
aacgcccagatctctcgccacaaaaccactgaggctgagagggccagccacctactgata
gcaacacgcaagtgttaccagcactttgccctggactactgtttgcagctgaacaacttt
aaagtccaacagaagctggacatcttaaactcggtcttttcctacttccacgcccagtac
accttctttcaccaaggctacgacttgttaagagacttggagcccaccatgaagactatg
gccacacagcttgctcaactttccacggattgctcatctaagagaaaagatctggagaac
acacatcttcttgtccagcaacgagatgcctctggggagcctgtcgttgcctgcacgcca
gcagatggtggaactatacaaggctacctgtttaagcgttcgcgcaggaagaacaagaca
tggaaaagatgctggttctccactgaaaacaaccagctagtgtacactaaaacacacaag
gagaagcccacaatgctgtttgatgacctcaggctgtgtgcggtgaagcagctggacagc
attgaccggcgcttttgttttgagctggtgtcagttcagaagtgctgtgccctgcaggcg
gactcggaggagctgaggcaggcctggatcaatgctgtgcagggcagcatagacatggcc
taccgccagaaagaggaggcgcagcagccccagcccaaggagagctctccaccggtgcag
gctgtggtccccccaccagggcagccaccccccagacaggctgtgcttggcgtggccctg
caggggtctggaaatcaacgctgctgcgactgtggagaggaggatccgcgctgggccagt
gtcaacctgggcatcaccatgtgcatagagtgctctggcatccacaggagccttggtgtc
cacctgtccaaagtccgatctctcaccctggattcatgggacccagaacaaatgaagcta
ctctgtatattagggaatgatgttgttaatggcatctatgaggagtgcagctcagaggac
ggcataaagaagcccacctctcacagcccacgtcaggaaaaggagacatggattaaagag
aagtatgtggggaagagatttgtgcgaaaggccaattcttgtgactcagaaaccgtgagg
cgtgaaggtgggcgacggctctaccaggcggccctccagggggaccttgtatccatggcg
gcagctctggcccatggcgcggaggtgaactggagtgacccacagcaggaggggagaact
gctctgattggtgcatccattgggggttcccttacagcatgcgagttcctgctccagaac
ggagccaatgtaaaccacagggaccagaggggccagggggctcttcacgctgctgccatc
gggggccacacagggcacgtgtgcctgcttctaaagaggggagccaatcaatacgcagct
gacgaaaagggaaatgacccgctcagcattgccatggagactgctcatgctgacattgtg
accttgctgagaatggcacgtatgaatgaggagatgagagattctgagggattctttggt
tcggttggtgatgatgaaacattccaggacatcttccgagacttcagcaacatggcatcc
cacgatccggagaagctctcccggagacagttcagtaagagtgcagacgaggatggcgag
gggaaccgactgataaatgatcaacatgtagaggaagatggaggaggaggaggagcagga
gaggatacttaa
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