Alosa sapidissima (American shad): 121684644
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Entry
121684644 CDS
T11137
Name
(RefSeq) protein IWS1 homolog isoform X1
KO
K17498
transcription factor SPN1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121684644
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121684644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
121684644
NCBI-ProteinID:
XP_041920643
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Position
15:15326501..15342134
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AA seq
687 aa
AA seq
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MDGEDEFFSGNHSDDGSGTPVQDENAPGSDADEDMRSEPRHSEDEGSDGEGDAAGSRANG
GGSGSDRDEGRGEDSDSDKDGPGHDSDSEPERPRPADSDDDEEEAASPPKRRGSTSENEE
EQKQNASDSENEEPSKPQPAPSDAGSDSENEAPKRKKIIDSDEDDDDDTKADDKKEEGSG
KWKGVMQSDSEEEDEGRAKPDAGSDQEQEGQSRRVAEDSDDDEDKPVKRKKAILSDSEDD
DDEKVAKKSRPMSAGENSDSDAASDIAEKTHAAKLRELGSDSEEEEKPKEDSEKKDEKTL
FGSDSESGEDEEEKMIADIFGESGDEDEEFTGFNQEELEGEKAKPQDSKAVAADDSDSDE
GVDRGGRDTISDFMSDFDMMLARKKAQSKKRRRNRDGGTFISDADDVVSAMITKMTEAAE
EDRTLNSQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWISPLPDKSLPALR
IREELLRILQELPSVSQETLKHSGIGRAVMFLYKHPKESRGNKNLALKLINEWSRPIFGL
SSNYKCMTREEREQRDLDQQVAPRGRRLSEPEKVDRPQEPDVFAPPPPSSGGQTPRRDLE
KVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVDTDSNRGPVVKKAMSRVDKQM
RRFADIRRLTKTGHAVKISVEGNRMPL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgaagatgagttcttttccgggaaccactctgatgatggcagtggtacccct
gtccaagatgaaaacgcaccaggctctgacgcagacgaggatatgagaagcgaacctcgc
cactccgaggacgagggaagtgacggcgagggagacgctgctggtagtagagctaacggt
ggaggcagcggttcagaccgggacgagggcaggggtgaggacagtgactctgataaggat
ggaccagggcatgacagtgattctgagcctgaacgtcccagacctgcggatagtgatgac
gatgaggaagaggctgcttcgcctcccaaacgcagaggcagtacctcagagaacgaggaa
gaacaaaaacagaacgccagcgactccgagaacgaggagccaagtaaaccccagccggca
ccttcggacgcaggaagtgactctgaaaacgaggcccccaagagaaagaaaataatagat
tcggacgaggatgatgacgatgacacaaaagcagacgataaaaaggaggaagggagcggg
aaatggaagggagttatgcagtcagacagcgaggaagaggatgaagggcgggctaaacct
gatgcgggaagtgaccaagagcaggagggtcagtcgcgacgagttgcagaagatagcgat
gatgacgaggataagccagtgaagaggaagaaggccattctctcagacagtgaagacgac
gatgatgagaaagtcgccaagaagagccgcccgatgtcagccggagagaactcggacagc
gatgctgcctctgacatagcagagaagacccatgccgccaaactgcgcgagctgggctca
gacagcgaggaagaggagaagccaaaagaagacagtgagaaaaaagacgagaaaacgctg
tttggcagcgacagtgagtccggagaggacgaagaggaaaaaatgatcgcagacatcttt
ggagagtcaggagatgaggatgaagagtttactggcttcaatcaggaagagctggaggga
gagaaggctaaaccacaggactccaaggcagtcgcagctgatgactcagactctgatgaa
ggagtagatcggggtggtagagacacaatatccgacttcatgtctgactttgacatgatg
ctggctcggaaaaaggcccagagcaaaaagcgcagaagaaacagagatggtggaacgttc
atcagtgacgcagatgatgtcgtgagcgccatgattaccaagatgacagaggcagcagag
gaggacagaacactaaatagccaaaagaaaccagctttgaaaaaactcaccctgcttcca
acagtagttatgcacctcaaaaagcaggatctgaaggagacgttcattgacagtggtgtg
atgtccgccatcaaggaatggatcagtccgttgccagacaagagccttcctgccctcagg
atcagagaagagctgctcaggattctacaggaactgcccagcgtcagtcaggagaccctg
aagcacagtgggattggccgtgccgtcatgttcctctacaagcaccccaaagagtcacgc
ggcaacaaaaacctcgccctcaaactcatcaatgagtggtccaggccaatcttcgggtta
tcgtccaactataaatgcatgaccagagaggagcgagaacaacgagacctggaccaacag
gttgcccctcgcggcagacgcctcagtgagcccgagaaggtggacaggccccaggagccg
gatgtctttgccccccctccacccagctcagggggacagacaccacgcagggatctggag
aaagtgctgacgggagaggaaaaagcccttcgcccgggtgacccaggcttctgcgcacgt
gcccgagtgcccatgccctcgaacaaagattacgtggtccggcccaaatggaatgtagac
acagactccaaccggggtccagtcgtcaagaaggccatgtctcgcgtggacaaacagatg
cgtcgtttcgccgatatccgccgcctgaccaagactggccatgcagtcaagatcagcgta
gagggcaaccgcatgcccctttga
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