Alosa sapidissima (American shad): 121684793
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Entry
121684793 CDS
T11137
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04517
IgSF CAM signaling
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121684793
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121684793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121684793
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121684793
Intermediate filaments
Intermediate filament-binding proteins
121684793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
DUF7854
Motif
Other DBs
NCBI-GeneID:
121684793
NCBI-ProteinID:
XP_041920800
LinkDB
All DBs
Position
16
Genome browser
AA seq
2378 aa
AA seq
DB search
MELQRATSMPGPLSPGPLSPGHVSPGPLSPGPLSPGLGPSSPVPGPSGASPSSGSGAAGL
SYSAQAAYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRMSCRITDLYMDLRDGRML
IKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLG
LIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAF
NALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIIT
YVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNR
KFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKL
ISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQD
NFGFDLQAVEAATKKHEAIETDIGAYEERVQAVLSVASELEKESYHDIKRVTARKDNVLR
LWEYLLELLRSRRLRLEQNLGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQ
KHALVEADISIQADRVKAVNATAQKFITDMEGYKPCDPQVIRDRVAHMEFCYQELNQLAA
ERRARLEESRRLWKFFWEMAEEEGWVREKEQILSSDDCGKDLTAVVRLLSKHKALEDEMS
GRAGHLQQTVKQGQELVAAGHFGSDKISERINDVQEQWAALERLAAARKNRLQEAYGMHQ
FQADADDMDAWMLDVLRIVSSADVGHDEFSTQALVKKHKDVAEEIASYRPVLEALHEQAK
ALPPSHADSDEVKGRLAGIEERYGEVAELTRLRKQALQDALALYKMFSEVDACEVWIDDK
ELWLNSMEIPERLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKA
QQDKLNTRWSQFRDLVDQKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQDLGNDL
AGVMALQRKLTGMERDLAAIEDKLGDLGKEAERLSAEHPDQAPGIKGRLGEINEVWDEMK
GTLRAREESLGEASKLQGFLRDLDDFQAWLSRTQTAIASEDMPNTLAEAEKLLTQHEGIK
NEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQKLLSQS
HAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTILEAAEGAIKKQEDFMTTMDANEEKINAV
VETGRRLVSDGNTSADRIQEKVDSIDQRHKKNREAASGLLAKLKDNTDLQRFLQDCQELS
LWISEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMALVAEKPETE
PVVKEKLGTLKRQWNDLESTTQTKAQCLFDANKAELFTQSCADLDKWLVGLEGQIQSDDY
GKDLTSVNILLKKQQMLESQVEVRQKEVGELHSQAQALRQEGKDSDEVDSRRRGVEQKFQ
GLLDPLRQRKRSLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQ
TLQKEIQGHQPRYDDIFERSKSIVKADSPNGDVIRQRLSDLRGLWAQIIEETGKRHGRLE
EAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQIVEQAVEDYAETVH
QLSQTSRALMGAGHPESERISMRQSQVDKLYAGLKDLSEERRGKLDERSRLFQLNREVDD
LEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNQMADELINSG
HADAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKHKKLP
EELGRDQNTVETLQRMHTTFEHDIQALGTQVKQLQEDAVRLQSAYAGDKAEDIARREGEV
LEAWRSLLEASEGRRVRLLDTSDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVELL
MNNHQGIKAEIDARNDSFTTCIEMGKALLARKHYSSEEIKEKLLQLTDKRKEMIDKWEDR
WEWLRLVLEVHQFSRDAGVAEAWLYGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATW
EERFAALERLTTMELLEVRRQQEEEERKRQPPPVEVQPVEAEAAAAAAAASPQQKEGEPA
SQNGLLTEQDSPREAAGGSDVVNGVVEPSPGPSPTASRKAKPSQAATLPAKPQETATQME
GFLHRKHEWEGHNKKASNRSWHNVYCVINNQEMGFYKDSRSASQGIPYHSEMPIRLRDAT
CEVAVDYKKKKHVFKLKICDGNEYLFQAKDDEEMNSWIQAISTATPSDRSEVAPSSHSTP
ASSRAHTLPATVNPVAESSPGKREKDKEKRFSLFSKKK
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggagctccagagggccaccagcatgcctgggcccctgtcccccggacctctctcccct
ggacacgtttccccgggacctctctccccgggacccctctctcctgggctcggcccgtcc
tctccggtcccgggccccagcggtgccagtccgtcctcaggctcaggtgccgctgggctc
agttactccgctcaggctgcctacaactacaaccagctagaggggcgcttcaaacagctg
caagatgagcgtgaggcggtgcagaagaagaccttcaccaaatgggtcaactcccacctg
tcgcgcatgtcctgccgcatcaccgacctctacatggacctgagggatggacgcatgctc
atcaagctgctggaggtgctctccggagagagactgccgaaacccaccaaagggcgcatg
cggatccactgcttggagaacgtagacaaggcgctgcagttcctcaaggagcagaaagtt
cacctggagaacatgggctcccatgacatcgtcgacggcaaccacagacttaccctcggc
ctcatctggaccatcatcctccgattccagatccaggacatcagtgtggagacggaggac
aataaagagaagaagtcggccaaggacgccctgctgctgtggtgtcagatgaagactgca
ggatatcccaatgtcaacatccacaatttcaccaccagctggagagatggcatggccttc
aatgccctcatccacaaacacaggcccgacctgattgactttgacaaactgaagaagtcc
aacgctcatcacaatctgcagaatgccttcaacttggctgagcagcacctgggtctgacc
aaactgctggacccagaggatatcagtgtggaccaccctgatgagaagtccatcatcact
tacgtggtcacgtactaccactacttctccaagatgaaggccctgaaggtggaaggcaaa
cgtattggaaaggtgctggacaatgctatcgagacggagaagatgattgagaagtatgag
tctctggcctccgacctgctggagtggatcgagcagacaatcattatactcaacaatcgc
aagtttgccaactcactggtgggcgtccagcagcagctgcaggccttcaacacctaccgc
accgtagagaagcctcccaagtttacagagaaaggcaacctggaagtgcttctcttcact
attcaaagcaagatgcgagccaacaatcagaaagtctacatgccgcgagagggcaagctc
atatcagacatcaacaaggcctgggagcgtctggagaaggcggagcatgagcgtgagctg
gcgctgaggacagagctgattcgccaggagaagctggagcagctcgcccgccgcttcgac
cgaaaggccgccatgagggagacctggctgagcgagaaccagcgcctagtctcacaggac
aactttggctttgacctgcaggcggtggaggcggccacgaaaaagcacgaggccatcgag
acggacatcggggcgtacgaggagcgcgtgcaggcagtgctgtcggtggcctcggagctg
gagaaggagagctaccacgacatcaagcgcgtgacggcgcgcaaggacaacgtgctgcgc
ctgtgggagtacctgctggagctgctccgctcacgccgcctccgcctggagcagaacctg
ggcctgcagagggtcttccaggagatgctccacatcatggactggatggacgagatgaag
atgctgctgctgtctcaggactatgggaagcacctgctgggcgtggaggatctgctgcag
aagcatgcgctggtggaggctgatattagcatccaggccgaccgagtcaaggctgtcaac
gccaccgcacagaaattcatcaccgacatggagggctacaagccgtgcgacccgcaggtg
atccgggaccgcgtggcccacatggagttctgctaccaggagctgaaccagctggcggcc
gagcggcgggcccgtctggaggagtcgaggcgcctgtggaagttcttctgggagatggcc
gaggaggagggctgggtccgggagaaggagcagatcctgtcgtcggacgactgcggcaag
gacctgaccgctgtggtgcgcctgctgagcaagcacaaggccctggaagatgagatgagt
ggccgtgccgggcacttgcaacagacggtcaagcagggccaggagctggtcgccgccggg
catttcggctcagacaagatcagcgagcgcatcaacgacgtccaggagcagtgggccgcg
ctggagcgcctggctgccgcccgcaagaaccgcctgcaggaggcctacggcatgcaccag
ttccaggcggacgccgacgacatggacgcgtggatgctggacgtgctgcgcatcgtgtcc
agcgccgacgtgggccacgacgagttctccacgcaggcgctcgtcaagaagcacaaggac
gtggccgaggagatcgccagctaccggcccgtgctggaagccctacacgagcaggccaag
gcgctgccgccgtcgcatgccgactcagacgaggtcaagggtcgtctggcgggcatcgag
gaacgctacggcgaggtggccgagctgacgcgcttgcgcaagcaggccctgcaggatgcg
cttgccctttacaagatgtttagcgaggtggacgcgtgcgaggtgtggatcgacgacaag
gagctgtggctcaacagcatggagatccccgagaggctggaggacctggaggtgatccaa
cacaggttcgagagcctggaaccagagatgaacaaccaggcctctcgtgtggcggtggtt
aaccagatcgccagacagctcatccacagtggtcacccgagtgagaaggagatcaaggcc
cagcaggacaaactcaacaccaggtggagccagttccgagacctggtggaccagaagaag
gactcgctcaactcagcgctgggcgtgcagaactaccacctggagtgcaacgagaccaag
tcgtggatccgcgagaagaccaaggtcatcgagtcgacgcaggacctgggcaacgacctg
gcgggcgtgatggcgctgcagcgcaagctgacgggcatggagcgcgacctggccgccatc
gaggacaagctgggcgacctgggcaaggaggccgagcggctatcggccgagcaccccgac
caggcgccgggcatcaaggggcgcctgggcgagatcaacgaggtgtgggacgagatgaag
ggcacgctgcgcgcccgcgaggagtcgctcggcgaggcgtccaagctgcagggcttccta
cgcgacctggacgacttccaggcgtggctgtcgcgcacgcagacggccatcgcgtccgag
gacatgcccaacacccttgccgaggccgagaagctcctgacgcagcacgagggcatcaag
aacgagatccgcaactacgaggaggactaccagaagatgcgcgacatgggcgagatggtc
acgcagggccagacggacgcccagtacatgttcctgcggcagcggctgcaggcactggac
accggctggaacgagctgcacaagatgtgggagaaccgtcagaagctgctgtcccagtcg
cacgcctaccagctcttcctcagggacaccaagcaggccgaggccttcctcaacaaccag
gagtatgtgttggcccatacggagatgcccaccatattggaggcggctgagggagccatc
aagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaacgccgtg
gtggagacgggacggcgtctggtgagcgatggcaacaccagcgctgaccgtatccaagag
aaggtggactccatcgaccagaggcacaagaagaaccgtgaggcagccagtgggctcctg
gccaaactgaaggacaacacagacctccagaggttcctgcaggactgccaggagctgtct
ctgtggatcagtgagaagatgctcacggcacaggacatgtcatacgacgaggcacgcaac
ctgcacagcaagtggctcaagcaccaggccttcatggctgagctgcagtccaacaaggag
tggctggacaagatcgagaaggatggcatggccctggtggcagagaagccggagacagag
ccggtggtcaaggagaagctgggcacgctgaagcggcagtggaacgatctggagtccacc
acgcagaccaaggcccagtgcctgttcgacgccaacaaggccgagctgttcacgcagagc
tgcgctgatctggacaagtggctggtaggcctggagggacagatccagtccgacgactac
ggcaaggacctgaccagcgttaacatcctgctcaagaaacaacagatgctggagagccag
gtggaggtgcgccagaaggaggtgggggagctgcactcgcaagcccaggcgctgcggcag
gagggcaaggactcggacgaggtggacagccggcggcgcggcgtggagcagaagttccag
ggcctgctggacccactgcgccaacgcaagagaagcctgatggcatcacgcgagatccac
cagttcaaccgcgacgtggaggatgagattctctgggtggaggagagaatgcctctggct
acgtccactgatcatggacacaacttacagaccgtccagctactcatcaagaagaaccag
accctccagaaggagatccagggccatcaaccgcgctacgacgacatcttcgagcgcagc
aagagcatcgtgaaggcggacagccccaacggggacgttatccggcagcggctgtccgac
ctgcggggcctgtgggcgcagatcatcgaggagacgggtaagcggcatggccgtctggag
gaggcacacaaagcccagcagtactactttgacgccgccgaggccgaagcctggatgagc
gagcaggagctctacatgatgtccgaggagaaggccaaggatgagcagagttccgtggcc
atgctgaagaagcaccagattgtggagcaggcggtggaggattacgccgagacggtgcac
cagctctcccagaccagcagggcgctgatgggcgctgggcatccggagagtgagcggatc
agcatgcggcagtcgcaggtggataagctctacgccggcctcaaggacctgtcggaggag
cggcggggcaagctggacgagaggtcgcggctcttccagctcaaccgcgaggtggacgac
ttggagcagtggatcgccgagcgcgaggtggtggccggctcgcacgagctgggccaggac
tacgagcacgtcacaatgctgcaggagcgtttccgggagttcgcccgcgacacgggcaac
atcgggcaggaacgtgtggacgccgtcaaccagatggcggatgagcttatcaactcgggc
cacgcagacgcggccaccattgccgagtggaaggacggcctgaacgaggcctgggccgac
ctcctggagctgatcgacacgcgcacgcagatccttgctgcctcctacgagctgcacaag
ttctaccacgacgccaaggaggtgctgggacgcatcctggacaaacacaagaagcttccg
gaagagctcggccgcgaccagaacacggttgagacactgcagaggatgcacacgaccttc
gagcacgacattcaggccctagggacacaggtgaagcagcttcaggaggacgcggtgcgg
ctgcagtcggcatacgcgggcgacaaggcagaggacatcgcccggcgcgagggcgaggtg
ctggaggcctggcgcagcctgctggaggccagcgagggccggcgcgtgcgtctgctggac
accagcgacaagttccgcttcttcagcatggtgcgcgacctcatgctctggatggaggat
gtcatccgcctcatcgacgcccaggagaagcccagggatgtgtcatccgtggagcttctg
atgaacaaccaccagggcatcaaagctgagatcgacgcccgtaatgacagcttcactacc
tgcattgagatgggcaaagccctgcttgctcgcaaacactactcatcagaggagatcaaa
gaaaagttgctacagctgacggacaagaggaaagagatgattgacaagtgggaagataga
tgggagtggctgagactggtgctggaggtgcatcagttctctcgtgacgcgggggtggcg
gaggcctggctgtacggtcaggagccgtacctgtccagccgcgagatgggccaaagcgtg
gacgaggtcgagaagctcatcaagcgccacgaggccttcgagaagtccgccgccacctgg
gaggagcgcttcgccgccctcgagagattgaccacgatggagttattggaagtgagaaga
cagcaagaggaagaagagaggaaaaggcagcctccacctgtagaggtccagccagtagag
gcagaagcagcagcagcagcagcagcagcatccccccagcagaaggagggtgagccggca
tctcagaacgggctgctgacggagcaggactctccccgggaggctgcgggaggaagtgat
gtcgttaatggagtggtggagcccagtccgggcccgtcccccacggcaagccggaaggcc
aaacccagccaggcggccactctgccggccaagccccaggagacggccacccagatggag
ggcttcctgcaccgcaagcatgagtgggagggccacaacaagaaagcctcaaacaggtcc
tggcacaacgtgtactgtgtgataaacaatcaggagatgggcttctataaggacagcagg
agcgccagccaaggcatcccttaccacagcgagatgcctatccgcctgagggatgctacg
tgcgaggtggctgtggactacaagaaaaagaaacacgtcttcaaactcaaaatttgtgat
gggaacgagtatctcttccaagccaaagatgatgaggagatgaattcctggatccaggcg
atctctaccgccacaccctcggaccgctccgaggtagcccccagcagccacagcacccct
gcgtccagccgcgctcacaccctgcccgccaccgtcaaccccgtcgcagagtccagcccc
ggcaagcgcgagaaggacaaggagaagcgcttcagtctcttcagcaagaagaagtag
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integrated database retrieval system
