Alosa sapidissima (American shad): 121684842
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Entry
121684842 CDS
T11137
Symbol
socs5b
Name
(RefSeq) suppressor of cytokine signaling 5b
KO
K04698
suppressor of cytokine signaling 5
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121684842 (socs5b)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121684842 (socs5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121684842
NCBI-ProteinID:
XP_041920882
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All DBs
Position
16:19181737..19207021
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AA seq
658 aa
AA seq
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MAKAGKMWSSLRSRCHTFLHLDGPCEVMDVAPCGLDLARASCSGEAQAFRASSPPRSLSP
LGPLVVPRRGHNCATDGPQILEITLDRDGEEDVVRRGPGGVTLGRRDSYSRHAPWGGKKK
HSCSTKTQSSLEAERRGGRASRAAGRRERRYAVSSIQEIAEPGGGGGGGGGGDRGSGGGV
AGRSLSARSLRQRLRDTMGLCLPLSPRRRSRSTSAKPASCSLAFSTVSSSSSSSSSSSSS
SAGSSCSSSSKRKIHLTELMLETCPFPPGSDLANKWHLIKQHTAPVSLQASGALLTSDPA
ETSATAGHAAPEDEEERMRERRRISIEEGVDPPPNAQIHTLEAGLPPSSSSSSSIYKLGP
KMAPATSGNSSGPSECAGVGVTAEVSGVRGNLSGMVTSGSVLGGLVAQALSGLSTSSSFS
HPPASEDCDSEEDSTTLCLQARRPKQRHASGDGHSSRQGGSSSSGVASSSSSSSGGPWKV
HTQIDYIHCLVPDLLRITALPCYWGVMDRYQAEALLDGRPEGTFLLRDSAQEDYLFSVSF
RRYNRSLHARIEQWNHNFSFDAHDPCVFHASTVTGLLEHYKDPSACMFFEPLLTAPLHRT
FPFGLQSLARAAICQRVTYDGIAALPLPPALQDFLKEYHYKQKVRVRWLERELPIRGK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcagggaaaatgtggagcagcctgcgcagtcgctgccacaccttcctccac
ctggacggcccatgcgaggtcatggacgtggccccctgcgggttggacctggcccgggcc
agctgctcaggcgaggcccaggctttccgggcctccagccccccgcggagcctctcgccc
ctcggcccgctggtggtgccccggcggggccacaactgcgccacggacggcccccagatc
ctggagatcacgctggaccgggacggggaggaggacgtggtgcggcgtgggcctggcggg
gtgaccctcggccgacgggactcgtactcacggcacgcgccctgggggggtaagaagaag
cactcgtgctccaccaagacacagagctcgctggaggccgagcggagaggggggcgcgca
tcgcgggcggccgggaggagggagagacgctacgccgtcagctccatccaggagattgct
gagcctggaggtgggggaggaggaggaggagggggggatagggggtcaggaggaggagta
gcgggccgcagtttgagtgcccggtcactgcgccagcgcctcagggacaccatgggcctg
tgcctgccgctgtcgccacgccgacggtcccggtccacctcggccaagccggcctcttgc
tctctggccttctccactgtctcgtcgtcttcctcgtcttcgtcctcctcgtcctcctcg
tcagccggctcgtcctgctcctcgtcgtccaagcgcaagatccacctgaccgagctcatg
ctggagacatgccccttcccaccgggctcggacctggccaacaagtggcacctgatcaag
cagcacacggcgccggtcagcctgcaggcgtccggcgcactgctgacctctgatcccgcc
gagacctccgccaccgctggccacgccgcgcccgaggatgaggaggagcgcatgcgcgag
cgccggcgaatcagcatcgaggaaggcgtagacccgccacccaacgctcagatccacacc
ctggaggcgggactcccgccaagctcctcctcctcttcctccatatataaactgggacca
aagatggcgccagcgaccagtggcaacagtagcggcccgagcgaatgtgcaggcgtcgga
gtgaccgcagaggtgtcgggggtgcgggggaacctgagcgggatggtcacatcggggagt
gtcctaggcggcctagtggcccaggccctgtccgggctgtccacttcgtcctcgttctcc
cacccccctgcctcagaggactgtgactcggaggaggactccaccaccctgtgcctgcag
gcacgccggcccaagcagaggcatgcgtccggtgatgggcactcgtcgcgacagggcggc
agcagcagctcaggcgtggcaagctcgtccagcagcagcagcggtgggccctggaaggtc
catacgcagatcgactacatccactgcctggtgccggacctgctgcgcatcacggccctg
ccctgctactggggcgtgatggaccgctaccaggccgaggcactgctggacggccggccc
gagggcaccttcctcctccgcgactcggcccaggaggactacctgttctcggtgagcttc
cgccgctacaaccgctccctgcacgcgcgcatcgagcagtggaaccacaacttcagcttc
gacgcgcacgacccatgcgtcttccacgcgtccaccgtcacgggcctgctcgagcactac
aaggacccgtcggcgtgcatgttcttcgagccgctgctcaccgcgccgctgcaccgcacc
ttccccttcgggctgcagagcctggcgcgcgccgccatctgccagcgcgtcacctacgac
ggcatcgccgcgctgccgctgccgcccgcgctgcaggacttcctcaaggagtatcactac
aagcagaaagtccgcgtgcgctggctggagagagagctgcccatcaggggcaaataa
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