Alosa sapidissima (American shad): 121684957
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Entry
121684957 CDS
T11137
Symbol
psmb1
Name
(RefSeq) proteasome subunit beta type-1
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121684957 (psmb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121684957 (psmb1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
asad03051
]
121684957 (psmb1)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121684957 (psmb1)
Peptidases and inhibitors [BR:
asad01002
]
Threonine peptidases
Family T1: proteasome family
121684957 (psmb1)
Proteasome [BR:
asad03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
121684957 (psmb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Cytochrom_C1
Motif
Other DBs
NCBI-GeneID:
121684957
NCBI-ProteinID:
XP_041921061
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All DBs
Position
16:24954616..24957974
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AA seq
237 aa
AA seq
DB search
MLSTHSYDANGKMKDYHYSGPVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIH
SRDSPKCYTLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTIL
YGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFK
NMENVQHVPLTQEKAVQLVKDVFISAAERDVYTGDALKICIVTKDGIREEIVPLRKD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaacacattcgtacgatgctaatgggaaaatgaaagattatcactattctggt
ccagtagagcacagattctctccctatgctttcaacggagggactgtgttggctgttgct
ggtgaggactttgccattgtagcctctgacactcgtctcagtgagggctactctatccac
agtcgggactctccaaaatgctacacgctgactgacacaacagtaattggctgcagtgga
tttcatggtgattgccttactctgaccaaaatcattgatgctaggctcaagatgtacaag
cactcaaataacaagagcatgacaagtggagccattgctgccatgctgtcaacaattctg
tatgggcggagatttttcccgtattatgtgtacaacatcatcggtggtctagatgaggag
ggaaaaggcgctgtctacagtttcgacccagtgggatcatatcagcgagacacttacaaa
gcgggaggctcagccagtgccatgctgcaacccttgctagacaaccagattggcttcaag
aacatggagaatgtgcagcatgttccactgacccaggagaaggcagtgcagttggtaaag
gacgtctttatctctgcggcagagagagacgtgtataccggtgatgccctcaagatctgc
atcgtcaccaaggacggcatcagagaggagattgttcctctcaggaaagactga
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integrated database retrieval system
