Alosa sapidissima (American shad): 121685199
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Entry
121685199 CDS
T11137
Symbol
vcla
Name
(RefSeq) vinculin a isoform X1
KO
K05700
vinculin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04517
IgSF CAM signaling
asad04518
Integrin signaling
asad04519
Cadherin signaling
asad04520
Adherens junction
asad04810
Regulation of actin cytoskeleton
asad04820
Cytoskeleton in muscle cells
asad05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121685199 (vcla)
04518 Integrin signaling
121685199 (vcla)
04519 Cadherin signaling
121685199 (vcla)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121685199 (vcla)
04520 Adherens junction
121685199 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121685199 (vcla)
04810 Regulation of actin cytoskeleton
121685199 (vcla)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121685199 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121685199 (vcla)
04147 Exosome [BR:
asad04147
]
121685199 (vcla)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121685199 (vcla)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121685199 (vcla)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DUF1839_C
Mob_Pre
HTH_FAR1
Motif
Other DBs
NCBI-GeneID:
121685199
NCBI-ProteinID:
XP_041921533
LinkDB
All DBs
Position
16
Genome browser
AA seq
1133 aa
AA seq
DB search
MMPVFHTKTIESILEPVAQQISNLVIMHEEGEVDGKAIPDLTGPVAAVQAAVSNLVRVGK
ETVQTTEDQIMKRDMPSAFIKVENASAKLVQAAQMLKADPYSVPARDHLIDGSRGILSGT
SDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLVTYTKNLGPGMTKMAKMIDDRQ
QELTHQEHRIMLVNSMNTVKDLLPVLISAIKIFVTTRSGGGQGVEEAQKNRIYTFQKMSA
EITEIIRVLQLTSWDEDAWANKKDMEAMKRSLALIDAKMALAKAWLKDPNGMPGEAGEQA
VRGLLDEVGKVGELCAGKERREILGAGKALGQMTDQVSDLRARGQGPTPGGMQKAGQVSQ
GLDVLVGKVDGAARRLEALINAKQAIAKRMDAALSWLADPNGGPEGEENIRALLAEAKRV
ADMCEDPRERDDIMRSIGQIAGLTAKLVELRKQGKGSSPEARALAKQVGEALQTLQVKVN
RAIANMRPSKAALTLEGKMDQAIRWINNPSADDGGVGQAAIRGLVAEGRRLGNSLPAPYR
QDLLGRCDRVEQLMMTLADQAARGEADTPQARAVAAQLLESLKDLKCKMQEAMTQEVSDV
FSDTTTPIKLLAVAATAPPEAPNREEVFEERASNFENHANRLGATAEKAAAVGTANKTTA
EGIQAAVKSARELTPQVVSAACILLKNPGNQPAYEHFETMKNQWIDNIEKLTGLVDEAID
TKSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPK
FREMVKAASDELSRTISPMVMDAKAVAGNIQDPGLQKNFLDSAYRILAAVGGVREAFNPP
EPDFPPPPPDLDQLHVNDEQAPPPKPPLPEGEVPPPRPPPPEEKDEEFPDQKAGEVVSEP
MMVAARQLHDEARKWSSKPEDSGEGFDGAEGEVDVDEEDEFTDNEDDYEPELLLIPTNQP
VNQPMLAAAQALHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKD
IAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISE
EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggtgttccacacgaagacgatagagagtattcttgagcccgtggctcagcag
atctccaacttggtcatcatgcacgaagagggcgaagttgatggcaaagcgataccggac
ctcaccggaccggtggctgctgtgcaagccgccgtcagcaaccttgtacgggtggggaag
gagacagtccaaacaacagaggatcagattatgaagagagacatgccttctgcctttatt
aaagtggagaatgccagtgctaagctggtgcaggcggctcagatgttgaaggcggacccg
tactctgtccctgcccgagatcacttgattgacggctcacggggtatcctgtccggcacg
tcagaccttctgctcacctttgatgaggcagaggtgcgtaagatcatccgtgtgtgtaag
gggattctggagtacctgactgtggcagaggtggtggagagtatggaggacctggtgacc
tacacaaaaaacctggggccaggaatgaccaagatggccaagatgatcgatgaccggcag
caggagctcacccaccaggaacaccgcatcatgctggtcaactccatgaacacggtcaag
gaccttctgcctgtgctcatctcagccatcaagatctttgtgacgacgcggagtgggggg
gggcagggggtggaggaggcgcagaagaacaggatctacaccttccagaagatgagtgcc
gagatcaccgagatcatcagagtgctgcagctcacctcatgggacgaggacgcatgggcc
aacaagaaggatatggaggccatgaagagatctctggctctgatcgacgctaagatggct
ctggctaaagcctggctcaaagaccccaatggcatgccaggggaggccggtgagcaggcg
gtgcgggggctcctggacgaggtggggaaggtgggggagctttgcgctgggaaggagcgc
cgggagattctgggtgcggggaaagcgctcggacagatgactgaccaggtgtctgacctc
agagcaagaggtcagggccccaccccgggggggatgcagaaggccggtcaggtgtcccag
gggctggacgtgctggtggggaaggtggacggtgctgcgcggaggctggaggccctcatc
aacgccaagcaggccatcgccaagaggatggacgccgcactgagctggctggcggaccct
aacggaggtccagagggtgaggagaacattcgggcgctgctggctgaggccaagcgtgtt
gcagacatgtgtgaggacccgcgcgagcgtgacgacatcatgcgctccatcggccagatc
gccggcctcaccgccaaactggtggagctgcgcaaacaggggaaggggagcagcccagag
gcgcgagcgctggccaagcaggtcggggaggctctgcagaccctgcaggtgaaggtcaac
cgcgccatcgccaacatgaggccgtccaaagccgcgctcacgctggagggcaagatggac
caggccatacgctggatcaacaaccccagcgctgatgacggtggagtgggtcaggcagca
atccggggtctggtagcggagggccgtcgccttggcaactcgttgcccgctccttaccgg
caagacctgctgggccgctgtgaccgcgtcgagcagctgatgatgacgctggctgaccag
gccgcccgcggggaggccgacactccacaggcccgcgctgttgctgcccaactactggag
tccctcaaggacctgaagtgtaagatgcaggaggccatgacgcaggaggtgtctgatgtg
ttcagtgacaccaccacccccatcaaactactggctgtagctgcaaccgcccccccagag
gcacctaacagagaggaggtgtttgaggagagagcctctaactttgagaatcatgccaac
cgtctgggtgccactgctgagaaggctgctgccgtaggaacagccaataagacgacagcc
gagggcatccaggctgcagtgaagtccgccagggaactgacacctcaagtggtatctgct
gcttgtatcctgctgaagaacccaggcaaccagccagcatatgagcactttgagaccatg
aagaaccagtggattgataacatagagaaactcacaggtttggtggatgaggccatcgac
accaagtcgctcctggatgcctctgaagaggccattaagaaggacattgataaatgtcgc
gttgccatggcgaacgtgcagcctcagatgctggttgccggggcgacgagcattgcacgg
cgggccaatcggatcctgctggtggccaagcgagaagtggagaactcagaggaccccaaa
ttcagggagatggtcaaggcggcatcagacgagctcagcaggaccatctcgcccatggtg
atggacgccaaggccgtggctggcaacatccaggacccaggtctgcagaagaacttcctg
gactcagcctacaggatcctggcagccgtggggggagtgcgtgaggccttcaaccccccc
gagccagacttccctccaccacccccagacctggaccaactgcatgtgaatgatgagcag
gctcctccccctaagcccccgctgcctgagggagaggtccccccccctcgacccccccct
ccagaggagaaggacgaagagttcccagatcagaaggccggagaggtggtcagcgagccc
atgatggtggcggccaggcagctccacgacgaggcccgcaagtggtcaagcaagccggag
gactcaggggaaggctttgatggggcggagggtgaggttgatgtagacgaggaggacgag
ttcacagacaacgaggacgattatgagcccgagctgctgctcattcccaccaatcagcca
gttaaccagcccatgctggccgcggcccaggctttgcaccaggaagctcgcaagtggtcc
agtaagggtaatgacatcatcgcggcggccaagcgcatggcgttgctgatggcggagatg
tccagactggttcgtggcggcagcggcaacaagcgggcactcatccagtgcgccaaggac
atcgccaaggcctccgatgaggtcacgcgtcttgccaaggaggtcgctaagcagtgcacc
gacaaacgcatacgcaccaacctgctacaggtgtgtgagcgtatccccaccattagcact
cagctgaagatcctctccaccgtcaaagccaccatgctgggccgcaccaacatcagtgag
gaggagtccgaacaggccacggagatgctggtgcacaacgctcagaacctgatgcagagt
gtgaaggagactgtgcgtgaggccgaggccgcgtccatcaagatccgcaccgatgctggc
ttcactctgcgctgggtgcgcaagactccctggtaccagtga
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