Alosa sapidissima (American shad): 121685271
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Entry
121685271 CDS
T11137
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04217
Necroptosis
asad04620
Toll-like receptor signaling pathway
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121685271 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121685271 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121685271 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asad04054
]
121685271 (tlr3)
04090 CD molecules [BR:
asad04090
]
121685271 (tlr3)
Pattern recognition receptors [BR:
asad04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121685271 (tlr3)
CD molecules [BR:
asad04090
]
Proteins
121685271 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
LRR_9
TIR
TIR_2
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
121685271
NCBI-ProteinID:
XP_041921680
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All DBs
Position
1:complement(19276349..19291107)
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AA seq
898 aa
AA seq
DB search
MNLSFIHVLLVGCMSSFAPCLGLVPKRTTCLVQNGTADCSHLGLREIPSDLPRNITSLDV
SHNQLRTLNPATLLLFPALRHLDMSYNSIAKMDASWCTSLPSLKNLSIQHNVVHILQNKD
LHSCSNLTQLNLADNRLKLKDEPFAALQSLTWLDVSNNGLASVKLGNQPQMVNLVTLALS
GNKIATLGKDDFYFLKNSSLQVLKLMKMADLQTIEPGCFKPLSSLRALLLDNSKLTPLVI
SKLCVELSVTALRDLSLRSTQQASLSNTTLTGLSATNLTRLDLGMNSIAHIENGSFLGLS
NLGSLSLEQNNLKNLNNGTFQGLENLRWLNLWYAVKGNVGNGSFEPLRKLEFLYMGKNSM
KDVKELPFSGLHSLTFLDLSQSTSLMKTVTNRTFAALAGSPLKTLNLSYMAIQNLNPGAF
SCLGNLTTLLLAKNFISQRLSGLEFQGLQQVEKIDLSINRQQISLTPESFINVPTLKVLY
LGQAISGTLDLKPSPFQPLVNLTSLDLSNNNIANINEGLLEGLIHLKILKLQHNNLARLW
KNANPGGPVLFLKTLHNLTILQMDSNGLDELPVDAFRGLTNLRELSLSGNILDKLYKPVF
DDLISLRVLQMQKNTVTSVPKQVFQPAFANLSYLNMERNPFDCTCESILWFVEYLNASVL
GLQGDYICNTPPAYYNRSIMNFEIQSCKDMTPFQALYVLNSTAVLALLFSAFLVRFQGWR
IQFYWSILVNRTLGFKDEAVEEGRYEYDGYIIHAAQDSGWVDYQLLPLEKENFKFFLEDR
DAEPGRSQLEAIVNNMRKSRKIIFVVTEELLKDSWVRHFKAHHAVHQRIEDSRDSVVLVL
LQEVRDHQLQALLLRRSMLKPRCVLDWPQQRERIPAFRQKLRLALASSNRASSSKWLH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtctttcatccatgttctactggtggggtgcatgtcatcttttgccccctgt
cttggccttgtacctaaaaggacgacctgcttggtgcaaaatggcacagcagactgcagc
catctgggattgagggaaatcccatccgatctcccgagaaacattaccagcctggatgtg
tctcacaaccagctgaggacactaaacccggcaactctgctgctcttccctgctcttcga
cacctagacatgagctacaacagtatcgctaaaatggatgcaagctggtgcacgagcctc
ccctctctcaagaacctcagcatccaacacaacgttgttcacatactgcagaataaagat
ttgcactcatgctcaaatttgactcagcttaacctcgctgacaacaggttgaaacttaaa
gacgaacctttcgctgccctccagagtttgacatggttggatgtgtctaataatggcttg
gcatcagtgaagttgggaaatcaaccccaaatggtgaatctagtgacccttgcactttcg
gggaacaaaattgcgacattggggaaggacgacttttattttctcaaaaactcttccctt
caagtcctcaagcttatgaaaatggcagatctacaaacgattgaaccgggttgcttcaaa
cctctctccagcctgagagcccttttgctggacaacagtaaactcactcccttggtcatc
tccaagctgtgtgtagagctctctgtgacagcactgagggacctctccctcaggagcact
cagcaagcctcgctcagtaacaccactctcaccgggctcagcgctacgaacctcaccagg
ttggacctgggcatgaacagcatagctcatattgagaatgggtcatttctaggcctcagc
aatctgggctctctttcattggagcagaacaacctgaagaatttgaacaatgggacgttt
caagggttggagaacctgcgctggttgaatttatggtatgcagtgaagggaaatgtggga
aatggttcgtttgagccattgagaaagctggagttcctgtacatggggaaaaactccatg
aaagacgttaaggaattacctttttctggtctgcacagtttaacatttttggatctgagc
cagagcacatcactgatgaaaactgtcactaacaggacatttgccgctcttgcaggttca
cctctgaagaccttaaacctatcctatatggcaatccaaaatctgaacccaggtgccttc
tcttgcttaggaaatcttaccactctcttgcttgcaaagaacttcattagtcagagactg
tcaggattggaatttcaaggtcttcaacaggtggagaaaatagatctttctatcaacagg
caacagattagcctgacccctgaatcttttataaatgtgcccacactgaaagttctttat
ttgggccaagctatcagtggaacattggacctgaaaccatcacctttccagcccctggtc
aaccttacatcgctcgacctcagcaacaacaatattgccaacatcaatgaaggattactg
gagggactaatccatctgaagatcctgaaactacagcataacaacctggctcggctttgg
aagaacgcaaaccctggtggtcctgtgcttttcctaaagaccttacataaccttaccatc
ctccaaatggactcaaatggcctggatgagcttccagtggatgcctttcggggtttaacc
aaccttagagagctcagtcttagtgggaatatccttgacaaactatacaagcctgtattt
gatgatctgatatctttacgtgtccttcagatgcagaagaacacggtgacatcggtgcct
aaacaggtctttcagcctgcatttgctaacctaagctatctgaacatggaacgcaacccc
tttgattgcacttgtgagagcatcctgtggtttgttgagtacctgaacgccagcgtcctg
ggcctccagggagactatatctgcaacacgccacctgcttactacaaccgttccatcatg
aattttgaaattcaatcctgcaaggatatgacacctttccaggcactctatgttctgaac
agcactgctgttctggctttgctgttctctgccttcctggtacgttttcagggctggcgc
atccagttttactggagtatcctggtcaaccgcaccttgggctttaaggacgaggctgtg
gaggaaggaagatatgaatatgatggctacattatccatgcggcacaagacagtggttgg
gtcgactatcagctgctccctttggagaaagaaaattttaaattctttctggaggatcga
gatgctgaaccaggtcgctcacagctagaagccattgtgaacaacatgagaaagtccagg
aaaataatatttgttgtcacagaggaacttctgaaggattcctgggttcgacatttcaag
gcgcaccacgcggtgcaccagcggatagaggacagccgcgactccgtggtgctggtgctg
ctgcaggaggtgcgtgaccaccagctgcaggccctgctgctgcgccgctccatgctgaag
ccccgctgcgtgctggactggccccagcagagggagcgtatccctgccttccgccagaag
ctacggctggcgctagcctccagcaatcgggcgtccagctccaagtggctccactga
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