Alosa sapidissima (American shad): 121685301
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Entry
121685301 CDS
T11137
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121685301 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121685301 (papolg)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121685301 (papolg)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121685301 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
121685301
NCBI-ProteinID:
XP_041921682
LinkDB
All DBs
Position
16:complement(14236339..14252814)
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AA seq
805 aa
AA seq
DB search
MKEMSAASVSTLSGQQQPQKHYGITSSISLAFPREIDHMYTQKLIEAMKPFGVFEDEDEL
NHRLAVLGKLNSIVKEWISEISDIKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALC
VAPRHVERTDFFLSFFEKLKQLEEIKDLRAVEDAFVPVIKFNFDGIEIDLLFARLALPSI
PDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYS
NMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLP
VWDPRVNPSDRYHLMPIITPAYPHQNSTYNVSTSTRTIMSEEFKNGLTVTDEILLGKAEW
SKLFEPPNFFQKYKHYIVLTASASTEDNHLEWIGLVESKIRVLVGNLERNEYIVLAHVNP
QSFPGSKESRIENDYVSMWFIGISFKKMESSESVNIDLTYDIQSFTDTVYRQANNINMLK
DGMKIEATHVKRKQLHQYLPPDVLQRKRKSMGDPNRSSTGGDSKRCSMDGSQLDSSRDTD
TGTPFSSPTPVCMPFKAEVDAESVTPSKPPVPLFVESSPPSEAEQGMSIPVIGSKPAASP
AAKPPSPTPAGSTIPTVVGRSVIPRASSNSPTELPNGAGPAPPKRPHSPTLEEPLKRSNT
DMGFAAPPAGSTIPTVVGCSVIPCQGSPTGSPADDLPNGLNGSASKRPHSPSLEEATKRS
KETEELVFSDDSAFKEPLPPASNGQEKGDGPGMDGHGGTKPMPIPTIDTSRTQRLPSKEL
PDASSPIPTSNLRVVKNSIRLTLNR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagcggccagtgtcagtacgcttagtgggcagcagcagcctcagaaa
cactatggcatcacctcctccatcagcctggcttttcccagggagattgatcatatgtac
actcaaaaactcattgaggcaatgaagccttttggagtgtttgaggatgaagatgagttg
aaccacagattggccgttcttggaaaactaaattcaattgtgaaggagtggatttctgag
ataagtgatatcaagaacctcccaccctcagcagtcgctaatgttggaggcaaaatcttc
acatttggctcatataggctgggtgttcacaccaaaggggctgatattgacgctttgtgt
gtggcgccccggcatgtggaacggaccgacttcttcctgtccttcttcgagaagctcaaa
cagctagaggagattaaagatttacgggctgtagaagatgcctttgtgccggttatcaaa
ttcaacttcgatggcattgagattgatcttctgtttgctaggcttgcacttccatccatc
ccagacaacctggacctgagaggggactccctactgaggaatcttgacatcagatgcatt
cgcagtctgaatggttgccgtgtcactgatgagatattgtatttggtgccgaacaaggag
aacttcaggttgacattaagagccatcaaattatgggccaagcgtcgcggcatctactcc
aacatgctgggtttccttggaggtgtgtcgtgggcaatgctcgtggctaggacctgccag
ctctatcctaatgctgtagcagccacgctggtccacaagttcttcctggtcttctccaag
tgggaatggccaaatccggtgcttttaaaacagcctgaagacagcaacttgaatctacct
gtgtgggaccctcgagtgaacccctcagacaggtaccatctgatgcccatcatcacccct
gcgtacccacaccagaactccacctacaacgtgtccacctccacacgcacaatcatgagc
gaggagttcaaaaatggtttgactgtgacagatgaaatcctattgggtaaagcagaatgg
tcaaagctctttgagcctcccaacttcttccagaagtacaagcattacatagtgcttaca
gccagtgcatctacagaagataatcatcttgaatggattggacttgtggagtccaaaatc
cgcgtgcttgtgggaaatttggagcggaacgagtacattgttctggcccacgtgaacccc
cagtccttcccaggctccaaggagagccgcatcgagaatgattatgtctccatgtggttc
atcggcatcagtttcaagaagatggaaagctctgagagcgtaaacattgacctcacttac
gacatccagtcctttacagataccgtctaccgccaggccaacaacatcaacatgcttaag
gatggtatgaagatcgaggcgacccatgtgaagaggaagcagctccaccagtacctgcct
cctgacgtgctgcagcgcaagagaaagagtatgggtgaccccaaccgcagctccaccgga
ggggactccaaacgctgctccatggacggcagccagctggacagctccagagacacggac
acggggacccccttcagctcgcccacccccgtgtgcatgcccttcaaggcagaggtggat
gctgagagtgtcacgccctccaaacctccggtccctctctttgtggagagctctcccccc
tcggaggctgagcagggcatgtccattccggtcatcggctccaagcccgcagcctccccg
gcagccaagccccccagcccgaccccagctggaagcaccatccccacggtggtgggccgc
agtgtcatcccacgcgcgtccagtaacagccccacagagctgcccaacggggccggccca
gcgcccccaaagagaccccactctccaacactagaggagcccctcaagaggagtaacaca
gacatggggtttgcagcgccccctgctggaagcaccattcccactgtggtggggtgcagc
gtcatcccctgccagggctcccccaccggcagccctgctgacgacctgcccaacggactg
aatggatcggccagcaagagaccccactcccccagcctggaggaggccaccaagaggagc
aaagaaacagaggagctggtgttctctgatgactctgcgtttaaggagcctcttccccca
gccagcaatggccaggagaaaggagatgggcctggcatggacggccatggtggcacaaag
cccatgcccatacccaccatcgacacgtcacgaacacagagactacccagcaaggagctg
ccagacgcctcatcccccatccccaccagcaacctccgcgtggtcaaaaactccatcaga
ctcaccctcaaccgatag
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